data_6CPB # _model_server_result.job_id 3a8j6_xMOiBrb4m95QowSQ _model_server_result.datetime_utc '2024-10-20 01:28:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cpb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":203}' # _entry.id 6CPB # _exptl.entry_id 6CPB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CPB _cell.length_a 64.665 _cell.length_b 65.82 _cell.length_c 72.885 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CPB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6CPB _atom_sites.fract_transf_matrix[1][1] 0.015464 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 201 1 SO4 SO4 . D 2 SO4 A 1 202 3 SO4 SO4 . E 3 GOL A 1 203 4 GOL GOL . F 2 SO4 B 1 201 4 SO4 SO4 . G 3 GOL B 1 202 3 GOL GOL . H 3 GOL B 1 203 5 GOL GOL . I 4 HOH A 1 301 51 HOH HOH . I 4 HOH A 2 302 180 HOH HOH . I 4 HOH A 3 303 162 HOH HOH . I 4 HOH A 4 304 238 HOH HOH . I 4 HOH A 5 305 262 HOH HOH . I 4 HOH A 6 306 267 HOH HOH . I 4 HOH A 7 307 50 HOH HOH . I 4 HOH A 8 308 112 HOH HOH . I 4 HOH A 9 309 31 HOH HOH . I 4 HOH A 10 310 179 HOH HOH . I 4 HOH A 11 311 81 HOH HOH . I 4 HOH A 12 312 116 HOH HOH . I 4 HOH A 13 313 167 HOH HOH . I 4 HOH A 14 314 158 HOH HOH . I 4 HOH A 15 315 52 HOH HOH . I 4 HOH A 16 316 246 HOH HOH . I 4 HOH A 17 317 191 HOH HOH . I 4 HOH A 18 318 247 HOH HOH . I 4 HOH A 19 319 255 HOH HOH . I 4 HOH A 20 320 136 HOH HOH . I 4 HOH A 21 321 125 HOH HOH . I 4 HOH A 22 322 67 HOH HOH . I 4 HOH A 23 323 110 HOH HOH . I 4 HOH A 24 324 100 HOH HOH . I 4 HOH A 25 325 225 HOH HOH . I 4 HOH A 26 326 61 HOH HOH . I 4 HOH A 27 327 213 HOH HOH . I 4 HOH A 28 328 28 HOH HOH . I 4 HOH A 29 329 9 HOH HOH . I 4 HOH A 30 330 37 HOH HOH . I 4 HOH A 31 331 93 HOH HOH . I 4 HOH A 32 332 254 HOH HOH . I 4 HOH A 33 333 142 HOH HOH . I 4 HOH A 34 334 27 HOH HOH . I 4 HOH A 35 335 80 HOH HOH . I 4 HOH A 36 336 45 HOH HOH . I 4 HOH A 37 337 111 HOH HOH . I 4 HOH A 38 338 4 HOH HOH . I 4 HOH A 39 339 107 HOH HOH . I 4 HOH A 40 340 14 HOH HOH . I 4 HOH A 41 341 39 HOH HOH . I 4 HOH A 42 342 59 HOH HOH . I 4 HOH A 43 343 227 HOH HOH . I 4 HOH A 44 344 235 HOH HOH . I 4 HOH A 45 345 35 HOH HOH . I 4 HOH A 46 346 73 HOH HOH . I 4 HOH A 47 347 94 HOH HOH . I 4 HOH A 48 348 204 HOH HOH . I 4 HOH A 49 349 218 HOH HOH . I 4 HOH A 50 350 279 HOH HOH . I 4 HOH A 51 351 144 HOH HOH . I 4 HOH A 52 352 145 HOH HOH . I 4 HOH A 53 353 41 HOH HOH . I 4 HOH A 54 354 20 HOH HOH . I 4 HOH A 55 355 47 HOH HOH . I 4 HOH A 56 356 33 HOH HOH . I 4 HOH A 57 357 301 HOH HOH . I 4 HOH A 58 358 206 HOH HOH . I 4 HOH A 59 359 157 HOH HOH . I 4 HOH A 60 360 5 HOH HOH . I 4 HOH A 61 361 57 HOH HOH . I 4 HOH A 62 362 64 HOH HOH . I 4 HOH A 63 363 99 HOH HOH . I 4 HOH A 64 364 58 HOH HOH . I 4 HOH A 65 365 215 HOH HOH . I 4 HOH A 66 366 1 HOH HOH . I 4 HOH A 67 367 65 HOH HOH . I 4 HOH A 68 368 10 HOH HOH . I 4 HOH A 69 369 199 HOH HOH . I 4 HOH A 70 370 78 HOH HOH . I 4 HOH A 71 371 60 HOH HOH . I 4 HOH A 72 372 289 HOH HOH . I 4 HOH A 73 373 90 HOH HOH . I 4 HOH A 74 374 79 HOH HOH . I 4 HOH A 75 375 74 HOH HOH . I 4 HOH A 76 376 159 HOH HOH . I 4 HOH A 77 377 22 HOH HOH . I 4 HOH A 78 378 23 HOH HOH . I 4 HOH A 79 379 146 HOH HOH . I 4 HOH A 80 380 160 HOH HOH . I 4 HOH A 81 381 271 HOH HOH . I 4 HOH A 82 382 34 HOH HOH . I 4 HOH A 83 383 117 HOH HOH . I 4 HOH A 84 384 177 HOH HOH . I 4 HOH A 85 385 281 HOH HOH . I 4 HOH A 86 386 29 HOH HOH . I 4 HOH A 87 387 251 HOH HOH . I 4 HOH A 88 388 25 HOH HOH . I 4 HOH A 89 389 55 HOH HOH . I 4 HOH A 90 390 46 HOH HOH . I 4 HOH A 91 391 3 HOH HOH . I 4 HOH A 92 392 237 HOH HOH . I 4 HOH A 93 393 291 HOH HOH . I 4 HOH A 94 394 8 HOH HOH . I 4 HOH A 95 395 194 HOH HOH . I 4 HOH A 96 396 68 HOH HOH . I 4 HOH A 97 397 217 HOH HOH . I 4 HOH A 98 398 44 HOH HOH . I 4 HOH A 99 399 222 HOH HOH . I 4 HOH A 100 400 280 HOH HOH . I 4 HOH A 101 401 127 HOH HOH . I 4 HOH A 102 402 71 HOH HOH . I 4 HOH A 103 403 105 HOH HOH . I 4 HOH A 104 404 75 HOH HOH . I 4 HOH A 105 405 15 HOH HOH . I 4 HOH A 106 406 266 HOH HOH . I 4 HOH A 107 407 91 HOH HOH . I 4 HOH A 108 408 149 HOH HOH . I 4 HOH A 109 409 12 HOH HOH . I 4 HOH A 110 410 273 HOH HOH . I 4 HOH A 111 411 231 HOH HOH . I 4 HOH A 112 412 277 HOH HOH . I 4 HOH A 113 413 293 HOH HOH . I 4 HOH A 114 414 276 HOH HOH . I 4 HOH A 115 415 224 HOH HOH . I 4 HOH A 116 416 240 HOH HOH . I 4 HOH A 117 417 128 HOH HOH . I 4 HOH A 118 418 170 HOH HOH . I 4 HOH A 119 419 256 HOH HOH . I 4 HOH A 120 420 21 HOH HOH . I 4 HOH A 121 421 172 HOH HOH . I 4 HOH A 122 422 156 HOH HOH . I 4 HOH A 123 423 265 HOH HOH . I 4 HOH A 124 424 201 HOH HOH . I 4 HOH A 125 425 87 HOH HOH . I 4 HOH A 126 426 43 HOH HOH . I 4 HOH A 127 427 181 HOH HOH . I 4 HOH A 128 428 190 HOH HOH . I 4 HOH A 129 429 82 HOH HOH . I 4 HOH A 130 430 294 HOH HOH . I 4 HOH A 131 431 232 HOH HOH . I 4 HOH A 132 432 198 HOH HOH . I 4 HOH A 133 433 297 HOH HOH . I 4 HOH A 134 434 295 HOH HOH . I 4 HOH A 135 435 151 HOH HOH . I 4 HOH A 136 436 92 HOH HOH . I 4 HOH A 137 437 192 HOH HOH . I 4 HOH A 138 438 115 HOH HOH . I 4 HOH A 139 439 284 HOH HOH . I 4 HOH A 140 440 287 HOH HOH . I 4 HOH A 141 441 259 HOH HOH . I 4 HOH A 142 442 165 HOH HOH . I 4 HOH A 143 443 239 HOH HOH . I 4 HOH A 144 444 154 HOH HOH . I 4 HOH A 145 445 176 HOH HOH . I 4 HOH A 146 446 120 HOH HOH . I 4 HOH A 147 447 275 HOH HOH . I 4 HOH A 148 448 195 HOH HOH . I 4 HOH A 149 449 228 HOH HOH . I 4 HOH A 150 450 193 HOH HOH . I 4 HOH A 151 451 212 HOH HOH . I 4 HOH A 152 452 223 HOH HOH . I 4 HOH A 153 453 236 HOH HOH . I 4 HOH A 154 454 226 HOH HOH . I 4 HOH A 155 455 86 HOH HOH . I 4 HOH A 156 456 134 HOH HOH . I 4 HOH A 157 457 30 HOH HOH . I 4 HOH A 158 458 109 HOH HOH . I 4 HOH A 159 459 83 HOH HOH . I 4 HOH A 160 460 264 HOH HOH . I 4 HOH A 161 461 229 HOH HOH . J 4 HOH B 1 301 250 HOH HOH . J 4 HOH B 2 302 185 HOH HOH . J 4 HOH B 3 303 123 HOH HOH . J 4 HOH B 4 304 300 HOH HOH . J 4 HOH B 5 305 253 HOH HOH . J 4 HOH B 6 306 183 HOH HOH . J 4 HOH B 7 307 49 HOH HOH . J 4 HOH B 8 308 53 HOH HOH . J 4 HOH B 9 309 244 HOH HOH . J 4 HOH B 10 310 174 HOH HOH . J 4 HOH B 11 311 260 HOH HOH . J 4 HOH B 12 312 285 HOH HOH . J 4 HOH B 13 313 70 HOH HOH . J 4 HOH B 14 314 298 HOH HOH . J 4 HOH B 15 315 89 HOH HOH . J 4 HOH B 16 316 101 HOH HOH . J 4 HOH B 17 317 84 HOH HOH . J 4 HOH B 18 318 270 HOH HOH . J 4 HOH B 19 319 104 HOH HOH . J 4 HOH B 20 320 249 HOH HOH . J 4 HOH B 21 321 42 HOH HOH . J 4 HOH B 22 322 282 HOH HOH . J 4 HOH B 23 323 152 HOH HOH . J 4 HOH B 24 324 26 HOH HOH . J 4 HOH B 25 325 143 HOH HOH . J 4 HOH B 26 326 202 HOH HOH . J 4 HOH B 27 327 216 HOH HOH . J 4 HOH B 28 328 200 HOH HOH . J 4 HOH B 29 329 48 HOH HOH . J 4 HOH B 30 330 114 HOH HOH . J 4 HOH B 31 331 2 HOH HOH . J 4 HOH B 32 332 108 HOH HOH . J 4 HOH B 33 333 118 HOH HOH . J 4 HOH B 34 334 188 HOH HOH . J 4 HOH B 35 335 121 HOH HOH . J 4 HOH B 36 336 139 HOH HOH . J 4 HOH B 37 337 219 HOH HOH . J 4 HOH B 38 338 88 HOH HOH . J 4 HOH B 39 339 77 HOH HOH . J 4 HOH B 40 340 102 HOH HOH . J 4 HOH B 41 341 141 HOH HOH . J 4 HOH B 42 342 6 HOH HOH . J 4 HOH B 43 343 40 HOH HOH . J 4 HOH B 44 344 38 HOH HOH . J 4 HOH B 45 345 220 HOH HOH . J 4 HOH B 46 346 164 HOH HOH . J 4 HOH B 47 347 85 HOH HOH . J 4 HOH B 48 348 56 HOH HOH . J 4 HOH B 49 349 245 HOH HOH . J 4 HOH B 50 350 150 HOH HOH . J 4 HOH B 51 351 98 HOH HOH . J 4 HOH B 52 352 135 HOH HOH . J 4 HOH B 53 353 205 HOH HOH . J 4 HOH B 54 354 13 HOH HOH . J 4 HOH B 55 355 290 HOH HOH . J 4 HOH B 56 356 155 HOH HOH . J 4 HOH B 57 357 257 HOH HOH . J 4 HOH B 58 358 214 HOH HOH . J 4 HOH B 59 359 163 HOH HOH . J 4 HOH B 60 360 36 HOH HOH . J 4 HOH B 61 361 54 HOH HOH . J 4 HOH B 62 362 124 HOH HOH . J 4 HOH B 63 363 11 HOH HOH . J 4 HOH B 64 364 234 HOH HOH . J 4 HOH B 65 365 268 HOH HOH . J 4 HOH B 66 366 129 HOH HOH . J 4 HOH B 67 367 24 HOH HOH . J 4 HOH B 68 368 182 HOH HOH . J 4 HOH B 69 369 132 HOH HOH . J 4 HOH B 70 370 63 HOH HOH . J 4 HOH B 71 371 66 HOH HOH . J 4 HOH B 72 372 140 HOH HOH . J 4 HOH B 73 373 19 HOH HOH . J 4 HOH B 74 374 131 HOH HOH . J 4 HOH B 75 375 113 HOH HOH . J 4 HOH B 76 376 16 HOH HOH . J 4 HOH B 77 377 7 HOH HOH . J 4 HOH B 78 378 258 HOH HOH . J 4 HOH B 79 379 211 HOH HOH . J 4 HOH B 80 380 261 HOH HOH . J 4 HOH B 81 381 286 HOH HOH . J 4 HOH B 82 382 133 HOH HOH . J 4 HOH B 83 383 17 HOH HOH . J 4 HOH B 84 384 278 HOH HOH . J 4 HOH B 85 385 203 HOH HOH . J 4 HOH B 86 386 230 HOH HOH . J 4 HOH B 87 387 122 HOH HOH . J 4 HOH B 88 388 62 HOH HOH . J 4 HOH B 89 389 186 HOH HOH . J 4 HOH B 90 390 138 HOH HOH . J 4 HOH B 91 391 32 HOH HOH . J 4 HOH B 92 392 175 HOH HOH . J 4 HOH B 93 393 69 HOH HOH . J 4 HOH B 94 394 171 HOH HOH . J 4 HOH B 95 395 243 HOH HOH . J 4 HOH B 96 396 76 HOH HOH . J 4 HOH B 97 397 72 HOH HOH . J 4 HOH B 98 398 147 HOH HOH . J 4 HOH B 99 399 233 HOH HOH . J 4 HOH B 100 400 242 HOH HOH . J 4 HOH B 101 401 221 HOH HOH . J 4 HOH B 102 402 296 HOH HOH . J 4 HOH B 103 403 197 HOH HOH . J 4 HOH B 104 404 96 HOH HOH . J 4 HOH B 105 405 126 HOH HOH . J 4 HOH B 106 406 274 HOH HOH . J 4 HOH B 107 407 103 HOH HOH . J 4 HOH B 108 408 169 HOH HOH . J 4 HOH B 109 409 130 HOH HOH . J 4 HOH B 110 410 148 HOH HOH . J 4 HOH B 111 411 178 HOH HOH . J 4 HOH B 112 412 248 HOH HOH . J 4 HOH B 113 413 95 HOH HOH . J 4 HOH B 114 414 209 HOH HOH . J 4 HOH B 115 415 207 HOH HOH . J 4 HOH B 116 416 119 HOH HOH . J 4 HOH B 117 417 184 HOH HOH . J 4 HOH B 118 418 187 HOH HOH . J 4 HOH B 119 419 272 HOH HOH . J 4 HOH B 120 420 241 HOH HOH . J 4 HOH B 121 421 269 HOH HOH . J 4 HOH B 122 422 168 HOH HOH . J 4 HOH B 123 423 252 HOH HOH . J 4 HOH B 124 424 208 HOH HOH . J 4 HOH B 125 425 161 HOH HOH . J 4 HOH B 126 426 173 HOH HOH . J 4 HOH B 127 427 299 HOH HOH . J 4 HOH B 128 428 189 HOH HOH . J 4 HOH B 129 429 196 HOH HOH . J 4 HOH B 130 430 283 HOH HOH . J 4 HOH B 131 431 292 HOH HOH . J 4 HOH B 132 432 153 HOH HOH . J 4 HOH B 133 433 18 HOH HOH . J 4 HOH B 134 434 210 HOH HOH . J 4 HOH B 135 435 106 HOH HOH . J 4 HOH B 136 436 137 HOH HOH . J 4 HOH B 137 437 97 HOH HOH . J 4 HOH B 138 438 288 HOH HOH . J 4 HOH B 139 439 166 HOH HOH . J 4 HOH B 140 440 263 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 3 -29.978 13.103 -10.434 1 65.06 ? C1 GOL 203 B 1 HETATM 2 O O1 GOL . . . H 3 -29.559 14.048 -9.475 1 66.7 ? O1 GOL 203 B 1 HETATM 3 C C2 GOL . . . H 3 -29.811 13.677 -11.838 1 64.23 ? C2 GOL 203 B 1 HETATM 4 O O2 GOL . . . H 3 -28.464 13.55 -12.239 1 64.52 ? O2 GOL 203 B 1 HETATM 5 C C3 GOL . . . H 3 -30.681 12.933 -12.843 1 63.35 ? C3 GOL 203 B 1 HETATM 6 O O3 GOL . . . H 3 -31.43 13.844 -13.615 1 63.06 ? O3 GOL 203 B 1 HETATM 7 H H11 GOL . . . H 3 -31.024 12.847 -10.264 1 78.06 ? H11 GOL 203 B 1 HETATM 8 H H12 GOL . . . H 3 -29.386 12.193 -10.336 1 78.06 ? H12 GOL 203 B 1 HETATM 9 H HO1 GOL . . . H 3 -29.731 13.698 -8.576 1 80.03 ? HO1 GOL 203 B 1 HETATM 10 H H2 GOL . . . H 3 -30.101 14.728 -11.828 1 77.07 ? H2 GOL 203 B 1 HETATM 11 H HO2 GOL . . . H 3 -28.221 12.601 -12.271 1 77.42 ? HO2 GOL 203 B 1 HETATM 12 H H31 GOL . . . H 3 -30.05 12.332 -13.497 1 76.02 ? H31 GOL 203 B 1 HETATM 13 H H32 GOL . . . H 3 -31.356 12.26 -12.314 1 76.02 ? H32 GOL 203 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #