data_6CPE # _model_server_result.job_id yqc6iiYzAxZre1I66QjSjw _model_server_result.datetime_utc '2024-10-10 07:28:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cpe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6CPE # _exptl.entry_id 6CPE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.227 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CPE _cell.length_a 80.55 _cell.length_b 80.55 _cell.length_c 169.79 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CPE _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O3' _chem_comp.formula_weight 162.227 _chem_comp.id P4G _chem_comp.mon_nstd_flag . _chem_comp.name 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 P4G sing 237 n n C8 H81 P4G sing 238 n n C8 H82 P4G sing 239 n n C8 H83 P4G sing 240 n n C7 O4 P4G sing 241 n n C7 H71 P4G sing 242 n n C7 H72 P4G sing 243 n n O4 C6 P4G sing 244 n n C6 C5 P4G sing 245 n n C6 H61 P4G sing 246 n n C6 H62 P4G sing 247 n n C5 O3 P4G sing 248 n n C5 H51 P4G sing 249 n n C5 H52 P4G sing 250 n n O3 C4 P4G sing 251 n n C4 C3 P4G sing 252 n n C4 H41 P4G sing 253 n n C4 H42 P4G sing 254 n n C3 O2 P4G sing 255 n n C3 H31 P4G sing 256 n n C3 H32 P4G sing 257 n n O2 C2 P4G sing 258 n n C2 C1 P4G sing 259 n n C2 H21 P4G sing 260 n n C2 H22 P4G sing 261 n n C1 H11 P4G sing 262 n n C1 H12 P4G sing 263 n n C1 H13 P4G sing 264 n n # _atom_sites.entry_id 6CPE _atom_sites.fract_transf_matrix[1][1] 0.012415 _atom_sites.fract_transf_matrix[1][2] 0.007168 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P4G A 1 501 1 P4G P4G . C 3 HOH A 1 601 1 HOH HOH . C 3 HOH A 2 602 2 HOH HOH . C 3 HOH A 3 603 4 HOH HOH . C 3 HOH A 4 604 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 P4G . . . B 2 47.355 11.353 47.205 1 65.37 ? C8 P4G 501 A 1 HETATM 2 C C7 P4G . . . B 2 47.52 12.679 47.954 1 74.72 ? C7 P4G 501 A 1 HETATM 3 O O4 P4G . . . B 2 48.367 12.516 49.063 1 72.98 ? O4 P4G 501 A 1 HETATM 4 C C6 P4G . . . B 2 48.214 13.477 50.078 1 66.13 ? C6 P4G 501 A 1 HETATM 5 C C5 P4G . . . B 2 48.948 13.033 51.351 1 68.74 ? C5 P4G 501 A 1 HETATM 6 O O3 P4G . . . B 2 50.293 12.745 51.064 1 84.13 ? O3 P4G 501 A 1 HETATM 7 C C4 P4G . . . B 2 50.945 11.874 51.954 1 79.3 ? C4 P4G 501 A 1 HETATM 8 C C3 P4G . . . B 2 52.366 11.563 51.461 1 83.9 ? C3 P4G 501 A 1 HETATM 9 O O2 P4G . . . B 2 52.315 10.83 50.262 1 92.75 ? O2 P4G 501 A 1 HETATM 10 C C2 P4G . . . B 2 53.397 11.013 49.382 1 79.1 ? C2 P4G 501 A 1 HETATM 11 C C1 P4G . . . B 2 53.191 10.183 48.11 1 66.39 ? C1 P4G 501 A 1 HETATM 12 H H81 P4G . . . B 2 46.598 11.415 46.602 1 78.43 ? H81 P4G 501 A 1 HETATM 13 H H82 P4G . . . B 2 48.16 11.166 46.697 1 78.43 ? H82 P4G 501 A 1 HETATM 14 H H83 P4G . . . B 2 47.202 10.638 47.843 1 78.43 ? H83 P4G 501 A 1 HETATM 15 H H71 P4G . . . B 2 46.652 12.985 48.259 1 89.66 ? H71 P4G 501 A 1 HETATM 16 H H72 P4G . . . B 2 47.903 13.339 47.355 1 89.66 ? H72 P4G 501 A 1 HETATM 17 H H61 P4G . . . B 2 47.27 13.585 50.275 1 79.35 ? H61 P4G 501 A 1 HETATM 18 H H62 P4G . . . B 2 48.58 14.322 49.776 1 79.35 ? H62 P4G 501 A 1 HETATM 19 H H51 P4G . . . B 2 48.52 12.239 51.707 1 82.48 ? H51 P4G 501 A 1 HETATM 20 H H52 P4G . . . B 2 48.907 13.745 52.008 1 82.48 ? H52 P4G 501 A 1 HETATM 21 H H41 P4G . . . B 2 50.995 12.29 52.829 1 95.15 ? H41 P4G 501 A 1 HETATM 22 H H42 P4G . . . B 2 50.442 11.047 52.018 1 95.15 ? H42 P4G 501 A 1 HETATM 23 H H31 P4G . . . B 2 52.84 12.395 51.307 1 100.67 ? H31 P4G 501 A 1 HETATM 24 H H32 P4G . . . B 2 52.832 11.044 52.134 1 100.67 ? H32 P4G 501 A 1 HETATM 25 H H21 P4G . . . B 2 53.462 11.951 49.145 1 94.92 ? H21 P4G 501 A 1 HETATM 26 H H22 P4G . . . B 2 54.216 10.731 49.819 1 94.92 ? H22 P4G 501 A 1 HETATM 27 H H11 P4G . . . B 2 52.95 9.275 48.351 1 79.66 ? H11 P4G 501 A 1 HETATM 28 H H12 P4G . . . B 2 54.013 10.173 47.594 1 79.66 ? H12 P4G 501 A 1 HETATM 29 H H13 P4G . . . B 2 52.481 10.576 47.579 1 79.66 ? H13 P4G 501 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #