data_6CPL # _model_server_result.job_id lCeQHfS4RgMLP5463AqpFQ _model_server_result.datetime_utc '2024-11-16 11:51:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cpl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":205}' # _entry.id 6CPL # _exptl.entry_id 6CPL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CPL _cell.length_a 65.746 _cell.length_b 65.746 _cell.length_c 222.514 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CPL _symmetry.cell_setting ? _symmetry.Int_Tables_number 151 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 1 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 L N N ? 6 M N N ? 6 N N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 D 1 NAG A 1002 NAG 4 n D NAG 2 D 2 NAG A 1003 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 107 A CYS 107 1_555 A SG CYS 163 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 B SG CYS 15 B CYS 15 1_555 B SG CYS 79 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 B SG CYS 117 B CYS 117 1_555 B SG CYS 173 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 78 A ASN 78 1_555 E C1 NAG . A NAG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale2 A ND2 ASN 118 A ASN 118 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale3 B ND2 ASN 19 B ASN 19 1_555 I C1 NAG . B NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale4 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 ? metalc ? metalc1 C O TYR 9 C TYR 301 1_555 P NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 326 n n S O2 SO4 doub 327 n n S O3 SO4 sing 328 n n S O4 SO4 sing 329 n n # _atom_sites.entry_id 6CPL _atom_sites.fract_transf_matrix[1][1] 0.01521 _atom_sites.fract_transf_matrix[1][2] 0.008782 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG A 1 303 1004 NAG NAG . F 6 SO4 A 1 304 2 SO4 SO4 . G 6 SO4 A 1 305 5 SO4 SO4 . H 7 NA A 1 306 1 NA NA . I 5 NAG B 1 201 1002 NAG NAG . J 8 ACT B 1 202 2 ACT ACT . K 8 ACT B 1 203 3 ACT ACT . L 6 SO4 B 1 204 1 SO4 SO4 . M 6 SO4 B 1 205 3 SO4 SO4 . N 6 SO4 B 1 206 4 SO4 SO4 . O 7 NA B 1 207 2 NA NA . P 7 NA C 1 401 3 NA NA . Q 9 HOH A 1 401 218 HOH HOH . Q 9 HOH A 2 402 47 HOH HOH . Q 9 HOH A 3 403 208 HOH HOH . Q 9 HOH A 4 404 160 HOH HOH . Q 9 HOH A 5 405 214 HOH HOH . Q 9 HOH A 6 406 217 HOH HOH . Q 9 HOH A 7 407 210 HOH HOH . Q 9 HOH A 8 408 219 HOH HOH . Q 9 HOH A 9 409 220 HOH HOH . Q 9 HOH A 10 410 213 HOH HOH . Q 9 HOH A 11 411 133 HOH HOH . Q 9 HOH A 12 412 184 HOH HOH . Q 9 HOH A 13 413 65 HOH HOH . Q 9 HOH A 14 414 109 HOH HOH . Q 9 HOH A 15 415 201 HOH HOH . Q 9 HOH A 16 416 206 HOH HOH . Q 9 HOH A 17 417 12 HOH HOH . Q 9 HOH A 18 418 5 HOH HOH . Q 9 HOH A 19 419 28 HOH HOH . Q 9 HOH A 20 420 11 HOH HOH . Q 9 HOH A 21 421 30 HOH HOH . Q 9 HOH A 22 422 59 HOH HOH . Q 9 HOH A 23 423 145 HOH HOH . Q 9 HOH A 24 424 57 HOH HOH . Q 9 HOH A 25 425 72 HOH HOH . Q 9 HOH A 26 426 159 HOH HOH . Q 9 HOH A 27 427 120 HOH HOH . Q 9 HOH A 28 428 38 HOH HOH . Q 9 HOH A 29 429 41 HOH HOH . Q 9 HOH A 30 430 16 HOH HOH . Q 9 HOH A 31 431 80 HOH HOH . Q 9 HOH A 32 432 102 HOH HOH . Q 9 HOH A 33 433 58 HOH HOH . Q 9 HOH A 34 434 29 HOH HOH . Q 9 HOH A 35 435 33 HOH HOH . Q 9 HOH A 36 436 74 HOH HOH . Q 9 HOH A 37 437 103 HOH HOH . Q 9 HOH A 38 438 134 HOH HOH . Q 9 HOH A 39 439 82 HOH HOH . Q 9 HOH A 40 440 151 HOH HOH . Q 9 HOH A 41 441 64 HOH HOH . Q 9 HOH A 42 442 90 HOH HOH . Q 9 HOH A 43 443 171 HOH HOH . Q 9 HOH A 44 444 71 HOH HOH . Q 9 HOH A 45 445 22 HOH HOH . Q 9 HOH A 46 446 85 HOH HOH . Q 9 HOH A 47 447 136 HOH HOH . Q 9 HOH A 48 448 137 HOH HOH . Q 9 HOH A 49 449 190 HOH HOH . Q 9 HOH A 50 450 98 HOH HOH . Q 9 HOH A 51 451 13 HOH HOH . Q 9 HOH A 52 452 111 HOH HOH . Q 9 HOH A 53 453 67 HOH HOH . Q 9 HOH A 54 454 117 HOH HOH . Q 9 HOH A 55 455 174 HOH HOH . Q 9 HOH A 56 456 150 HOH HOH . Q 9 HOH A 57 457 122 HOH HOH . Q 9 HOH A 58 458 99 HOH HOH . Q 9 HOH A 59 459 141 HOH HOH . Q 9 HOH A 60 460 164 HOH HOH . Q 9 HOH A 61 461 113 HOH HOH . Q 9 HOH A 62 462 49 HOH HOH . Q 9 HOH A 63 463 177 HOH HOH . Q 9 HOH A 64 464 138 HOH HOH . Q 9 HOH A 65 465 73 HOH HOH . Q 9 HOH A 66 466 95 HOH HOH . Q 9 HOH A 67 467 34 HOH HOH . Q 9 HOH A 68 468 182 HOH HOH . Q 9 HOH A 69 469 121 HOH HOH . Q 9 HOH A 70 470 51 HOH HOH . Q 9 HOH A 71 471 197 HOH HOH . Q 9 HOH A 72 472 144 HOH HOH . Q 9 HOH A 73 473 25 HOH HOH . Q 9 HOH A 74 474 165 HOH HOH . Q 9 HOH A 75 475 126 HOH HOH . Q 9 HOH A 76 476 163 HOH HOH . Q 9 HOH A 77 477 131 HOH HOH . Q 9 HOH A 78 478 205 HOH HOH . Q 9 HOH A 79 479 83 HOH HOH . Q 9 HOH A 80 480 169 HOH HOH . Q 9 HOH A 81 481 110 HOH HOH . Q 9 HOH A 82 482 148 HOH HOH . Q 9 HOH A 83 483 135 HOH HOH . Q 9 HOH A 84 484 158 HOH HOH . Q 9 HOH A 85 485 37 HOH HOH . Q 9 HOH A 86 486 66 HOH HOH . Q 9 HOH A 87 487 176 HOH HOH . Q 9 HOH A 88 488 70 HOH HOH . Q 9 HOH A 89 489 154 HOH HOH . Q 9 HOH A 90 490 108 HOH HOH . R 9 HOH B 1 301 35 HOH HOH . R 9 HOH B 2 302 215 HOH HOH . R 9 HOH B 3 303 211 HOH HOH . R 9 HOH B 4 304 207 HOH HOH . R 9 HOH B 5 305 10 HOH HOH . R 9 HOH B 6 306 55 HOH HOH . R 9 HOH B 7 307 17 HOH HOH . R 9 HOH B 8 308 69 HOH HOH . R 9 HOH B 9 309 75 HOH HOH . R 9 HOH B 10 310 18 HOH HOH . R 9 HOH B 11 311 6 HOH HOH . R 9 HOH B 12 312 221 HOH HOH . R 9 HOH B 13 313 27 HOH HOH . R 9 HOH B 14 314 32 HOH HOH . R 9 HOH B 15 315 114 HOH HOH . R 9 HOH B 16 316 162 HOH HOH . R 9 HOH B 17 317 187 HOH HOH . R 9 HOH B 18 318 31 HOH HOH . R 9 HOH B 19 319 118 HOH HOH . R 9 HOH B 20 320 106 HOH HOH . R 9 HOH B 21 321 3 HOH HOH . R 9 HOH B 22 322 87 HOH HOH . R 9 HOH B 23 323 153 HOH HOH . R 9 HOH B 24 324 39 HOH HOH . R 9 HOH B 25 325 96 HOH HOH . R 9 HOH B 26 326 193 HOH HOH . R 9 HOH B 27 327 209 HOH HOH . R 9 HOH B 28 328 36 HOH HOH . R 9 HOH B 29 329 180 HOH HOH . R 9 HOH B 30 330 101 HOH HOH . R 9 HOH B 31 331 21 HOH HOH . R 9 HOH B 32 332 2 HOH HOH . R 9 HOH B 33 333 24 HOH HOH . R 9 HOH B 34 334 152 HOH HOH . R 9 HOH B 35 335 76 HOH HOH . R 9 HOH B 36 336 56 HOH HOH . R 9 HOH B 37 337 203 HOH HOH . R 9 HOH B 38 338 9 HOH HOH . R 9 HOH B 39 339 124 HOH HOH . R 9 HOH B 40 340 92 HOH HOH . R 9 HOH B 41 341 94 HOH HOH . R 9 HOH B 42 342 119 HOH HOH . R 9 HOH B 43 343 54 HOH HOH . R 9 HOH B 44 344 61 HOH HOH . R 9 HOH B 45 345 60 HOH HOH . R 9 HOH B 46 346 79 HOH HOH . R 9 HOH B 47 347 185 HOH HOH . R 9 HOH B 48 348 77 HOH HOH . R 9 HOH B 49 349 127 HOH HOH . R 9 HOH B 50 350 179 HOH HOH . R 9 HOH B 51 351 26 HOH HOH . R 9 HOH B 52 352 170 HOH HOH . R 9 HOH B 53 353 62 HOH HOH . R 9 HOH B 54 354 129 HOH HOH . R 9 HOH B 55 355 143 HOH HOH . R 9 HOH B 56 356 84 HOH HOH . R 9 HOH B 57 357 194 HOH HOH . R 9 HOH B 58 358 100 HOH HOH . R 9 HOH B 59 359 89 HOH HOH . R 9 HOH B 60 360 157 HOH HOH . R 9 HOH B 61 361 202 HOH HOH . R 9 HOH B 62 362 198 HOH HOH . R 9 HOH B 63 363 46 HOH HOH . R 9 HOH B 64 364 173 HOH HOH . R 9 HOH B 65 365 44 HOH HOH . R 9 HOH B 66 366 43 HOH HOH . R 9 HOH B 67 367 104 HOH HOH . R 9 HOH B 68 368 132 HOH HOH . R 9 HOH B 69 369 212 HOH HOH . R 9 HOH B 70 370 107 HOH HOH . R 9 HOH B 71 371 105 HOH HOH . R 9 HOH B 72 372 199 HOH HOH . R 9 HOH B 73 373 181 HOH HOH . R 9 HOH B 74 374 168 HOH HOH . R 9 HOH B 75 375 204 HOH HOH . R 9 HOH B 76 376 40 HOH HOH . R 9 HOH B 77 377 53 HOH HOH . R 9 HOH B 78 378 149 HOH HOH . S 9 HOH C 1 501 116 HOH HOH . S 9 HOH C 2 502 222 HOH HOH . S 9 HOH C 3 503 216 HOH HOH . S 9 HOH C 4 504 48 HOH HOH . S 9 HOH C 5 505 14 HOH HOH . S 9 HOH C 6 506 115 HOH HOH . S 9 HOH C 7 507 146 HOH HOH . S 9 HOH C 8 508 123 HOH HOH . S 9 HOH C 9 509 156 HOH HOH . S 9 HOH C 10 510 15 HOH HOH . S 9 HOH C 11 511 52 HOH HOH . S 9 HOH C 12 512 50 HOH HOH . S 9 HOH C 13 513 172 HOH HOH . S 9 HOH C 14 514 142 HOH HOH . S 9 HOH C 15 515 86 HOH HOH . S 9 HOH C 16 516 189 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . M 6 20.991 -22.674 -2.787 1 110.17 ? S SO4 205 B 1 HETATM 2 O O1 SO4 . . . M 6 22.18 -23.495 -3.022 1 110.23 ? O1 SO4 205 B 1 HETATM 3 O O2 SO4 . . . M 6 20.548 -22.083 -4.054 1 110.07 ? O2 SO4 205 B 1 HETATM 4 O O3 SO4 . . . M 6 19.927 -23.512 -2.238 1 110.21 ? O3 SO4 205 B 1 HETATM 5 O O4 SO4 . . . M 6 21.312 -21.607 -1.836 1 109.89 ? O4 SO4 205 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #