data_6CQ9 # _model_server_result.job_id R7jXuzajHwiX7bNODYDo7A _model_server_result.datetime_utc '2024-11-05 06:39:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cq9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":405}' # _entry.id 6CQ9 # _exptl.entry_id 6CQ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CQ9 _cell.length_a 67.091 _cell.length_b 119.565 _cell.length_c 127.215 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CQ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 I N N ? 4 J N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 93 1_555 B SG CYS 74 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A CB SER 18 A SER 37 1_555 A CG ASP 249 A ASP 268 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.529 ? covale ? covale2 A CB SER 18 A SER 37 1_555 A OD2 ASP 249 A ASP 268 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.119 ? metalc ? metalc1 A O THR 123 A THR 142 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc2 A O THR 123 A THR 142 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? metalc ? metalc3 A OG1 THR 123 A THR 142 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.341 ? metalc ? metalc4 A O ILE 124 A ILE 143 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc5 A O ILE 124 A ILE 143 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc6 A O GLY 125 A GLY 144 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc7 A O GLY 125 A GLY 144 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? metalc ? metalc8 A O PHE 126 A PHE 145 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc9 A O THR 232 A THR 251 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc10 A O THR 232 A THR 251 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.989 ? metalc ? metalc11 A OG1 THR 232 A THR 251 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? metalc ? metalc12 A O ILE 233 A ILE 252 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc13 A O ILE 233 A ILE 252 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc14 A O GLY 234 A GLY 253 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc15 A O GLY 234 A GLY 253 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc16 A O PHE 235 A PHE 254 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.094 ? metalc ? metalc17 A OE1 GLU 290 A GLU 309 1_555 M CD CD . B CD 403 2_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc18 D K K . A K 402 1_555 B O ILE 124 B ILE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc19 D K K . A K 402 1_555 B O GLY 125 B GLY 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc20 D K K . A K 402 1_555 B O ILE 233 B ILE 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc21 D K K . A K 402 1_555 B O GLY 234 B GLY 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc22 E K K . A K 403 1_555 B O GLY 125 B GLY 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? metalc ? metalc23 E K K . A K 403 1_555 B O PHE 126 B PHE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.156 ? metalc ? metalc24 E K K . A K 403 1_555 B O GLY 234 B GLY 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc25 E K K . A K 403 1_555 B O PHE 235 B PHE 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc26 B O THR 123 B THR 142 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.874 ? metalc ? metalc27 B O THR 123 B THR 142 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc28 B OG1 THR 123 B THR 142 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.057 ? metalc ? metalc29 B O ILE 124 B ILE 143 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc30 B O THR 232 B THR 251 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc31 B O THR 232 B THR 251 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc32 B OG1 THR 232 B THR 251 1_555 L K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.18 ? metalc ? metalc33 B O ILE 233 B ILE 252 1_555 K K K . B K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc34 B NE2 HIS 294 B HIS 313 1_555 M CD CD . B CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 413 n n C27 H271 R16 sing 414 n n C27 H272 R16 sing 415 n n C27 H273 R16 sing 416 n n C28 C29 R16 sing 417 n n C28 H281 R16 sing 418 n n C28 H282 R16 sing 419 n n C29 C30 R16 sing 420 n n C29 H291 R16 sing 421 n n C29 H292 R16 sing 422 n n C30 C31 R16 sing 423 n n C30 H301 R16 sing 424 n n C30 H302 R16 sing 425 n n C31 C32 R16 sing 426 n n C31 H311 R16 sing 427 n n C31 H312 R16 sing 428 n n C32 C33 R16 sing 429 n n C32 H321 R16 sing 430 n n C32 H322 R16 sing 431 n n C33 C34 R16 sing 432 n n C33 H331 R16 sing 433 n n C33 H332 R16 sing 434 n n C34 C35 R16 sing 435 n n C34 H341 R16 sing 436 n n C34 H342 R16 sing 437 n n C35 C36 R16 sing 438 n n C35 H351 R16 sing 439 n n C35 H352 R16 sing 440 n n C36 C37 R16 sing 441 n n C36 H361 R16 sing 442 n n C36 H362 R16 sing 443 n n C37 C38 R16 sing 444 n n C37 H371 R16 sing 445 n n C37 H372 R16 sing 446 n n C38 C39 R16 sing 447 n n C38 H381 R16 sing 448 n n C38 H382 R16 sing 449 n n C39 C40 R16 sing 450 n n C39 H391 R16 sing 451 n n C39 H392 R16 sing 452 n n C40 C41 R16 sing 453 n n C40 H401 R16 sing 454 n n C40 H402 R16 sing 455 n n C41 C42 R16 sing 456 n n C41 H411 R16 sing 457 n n C41 H412 R16 sing 458 n n C42 H421 R16 sing 459 n n C42 H422 R16 sing 460 n n C42 H423 R16 sing 461 n n # _atom_sites.entry_id 6CQ9 _atom_sites.fract_transf_matrix[1][1] 0.014905 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007861 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K A 1 401 401 K K . D 2 K A 1 402 402 K K . E 2 K A 1 403 403 K K . F 3 Q5F A 1 404 404 Q5F Q5F . G 4 R16 A 1 405 405 R16 R16 . H 5 16C A 1 406 406 16C 16C . I 4 R16 A 1 407 407 R16 R16 . J 4 R16 A 1 408 408 R16 R16 . K 2 K B 1 401 409 K K . L 2 K B 1 402 410 K K . M 6 CD B 1 403 401 CD CD . N 3 Q5F B 1 404 402 Q5F Q5F . O 4 R16 B 1 405 403 R16 R16 . P 4 R16 B 1 406 404 R16 R16 . Q 4 R16 B 1 407 405 R16 R16 . R 4 R16 B 1 408 406 R16 R16 . S 4 R16 B 1 409 407 R16 R16 . T 4 R16 B 1 410 408 R16 R16 . U 4 R16 B 1 411 409 R16 R16 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C28 R16 . . . O 4 -0.941 -17.316 50.455 1 96.91 ? C28 R16 405 B 1 HETATM 2 C C29 R16 . . . O 4 -1.33 -15.914 49.987 1 104.5 ? C29 R16 405 B 1 HETATM 3 C C30 R16 . . . O 4 -0.465 -15.518 48.792 1 115.71 ? C30 R16 405 B 1 HETATM 4 C C31 R16 . . . O 4 -0.784 -14.08 48.388 1 113.74 ? C31 R16 405 B 1 HETATM 5 C C32 R16 . . . O 4 0.337 -13.159 48.864 1 128.88 ? C32 R16 405 B 1 HETATM 6 C C33 R16 . . . O 4 -0.265 -11.892 49.469 1 130.46 ? C33 R16 405 B 1 HETATM 7 C C34 R16 . . . O 4 -0.501 -10.855 48.372 1 124.7 ? C34 R16 405 B 1 HETATM 8 C C35 R16 . . . O 4 0.394 -9.645 48.63 1 119.11 ? C35 R16 405 B 1 HETATM 9 C C36 R16 . . . O 4 0.169 -8.584 47.554 1 106.59 ? C36 R16 405 B 1 HETATM 10 C C37 R16 . . . O 4 0.717 -7.248 48.054 1 99.18 ? C37 R16 405 B 1 HETATM 11 C C38 R16 . . . O 4 1.305 -6.455 46.888 1 104.77 ? C38 R16 405 B 1 HETATM 12 C C39 R16 . . . O 4 0.182 -5.825 46.068 1 82.31 ? C39 R16 405 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #