data_6CQD # _model_server_result.job_id et2Gv8KFKFpIhRNyf992Lg _model_server_result.datetime_utc '2025-08-31 04:01:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cqd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6CQD # _exptl.entry_id 6CQD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 131.03 _cell.angle_gamma 90 _cell.entry_id 6CQD _cell.length_a 146.886 _cell.length_b 51.882 _cell.length_c 107.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CQD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 143 A ASN 142 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc2 A OD2 ASP 156 A ASP 155 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc3 A OD1 ASP 156 A ASP 155 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc4 A OD2 ASP 156 A ASP 155 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc5 C O1G ANP . A ANP 301 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc6 C O2A ANP . A ANP 301 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc7 C O3G ANP . A ANP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc8 C O2B ANP . A ANP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc9 D MG MG . A MG 302 1_555 H O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc10 D MG MG . A MG 302 1_555 H O HOH . A HOH 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc11 E MG MG . A MG 303 1_555 H O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc12 B OD1 ASN 143 B ASN 142 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc13 B OD2 ASP 156 B ASP 155 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc14 F MG MG . B MG 301 1_555 G O2G ANP . B ANP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc15 F MG MG . B MG 301 1_555 G O3A ANP . B ANP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc16 F MG MG . B MG 301 1_555 G O2A ANP . B ANP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6CQD _atom_sites.fract_transf_matrix[1][1] 0.006808 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005924 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019275 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ANP A 1 301 1 ANP ANP . D 3 MG A 1 302 1 MG MG . E 3 MG A 1 303 1 MG MG . F 3 MG B 1 301 5 MG MG . G 2 ANP B 1 302 1 ANP ANP . H 4 HOH A 1 401 170 HOH HOH . H 4 HOH A 2 402 21 HOH HOH . H 4 HOH A 3 403 101 HOH HOH . H 4 HOH A 4 404 184 HOH HOH . H 4 HOH A 5 405 32 HOH HOH . H 4 HOH A 6 406 204 HOH HOH . H 4 HOH A 7 407 64 HOH HOH . H 4 HOH A 8 408 228 HOH HOH . H 4 HOH A 9 409 253 HOH HOH . H 4 HOH A 10 410 81 HOH HOH . H 4 HOH A 11 411 83 HOH HOH . H 4 HOH A 12 412 13 HOH HOH . H 4 HOH A 13 413 165 HOH HOH . H 4 HOH A 14 414 227 HOH HOH . H 4 HOH A 15 415 24 HOH HOH . H 4 HOH A 16 416 225 HOH HOH . H 4 HOH A 17 417 234 HOH HOH . H 4 HOH A 18 418 21 HOH HOH . H 4 HOH A 19 419 23 HOH HOH . H 4 HOH A 20 420 37 HOH HOH . H 4 HOH A 21 421 167 HOH HOH . H 4 HOH A 22 422 86 HOH HOH . H 4 HOH A 23 423 55 HOH HOH . H 4 HOH A 24 424 72 HOH HOH . H 4 HOH A 25 425 153 HOH HOH . H 4 HOH A 26 426 48 HOH HOH . H 4 HOH A 27 427 85 HOH HOH . H 4 HOH A 28 428 6 HOH HOH . H 4 HOH A 29 429 154 HOH HOH . H 4 HOH A 30 430 33 HOH HOH . H 4 HOH A 31 431 15 HOH HOH . H 4 HOH A 32 432 42 HOH HOH . H 4 HOH A 33 433 31 HOH HOH . H 4 HOH A 34 434 92 HOH HOH . H 4 HOH A 35 435 229 HOH HOH . H 4 HOH A 36 436 69 HOH HOH . H 4 HOH A 37 437 251 HOH HOH . H 4 HOH A 38 438 156 HOH HOH . H 4 HOH A 39 439 46 HOH HOH . H 4 HOH A 40 440 51 HOH HOH . H 4 HOH A 41 441 39 HOH HOH . H 4 HOH A 42 442 26 HOH HOH . H 4 HOH A 43 443 12 HOH HOH . H 4 HOH A 44 444 40 HOH HOH . H 4 HOH A 45 445 22 HOH HOH . H 4 HOH A 46 446 90 HOH HOH . H 4 HOH A 47 447 206 HOH HOH . H 4 HOH A 48 448 174 HOH HOH . H 4 HOH A 49 449 19 HOH HOH . H 4 HOH A 50 450 245 HOH HOH . H 4 HOH A 51 451 67 HOH HOH . H 4 HOH A 52 452 60 HOH HOH . H 4 HOH A 53 453 17 HOH HOH . H 4 HOH A 54 454 103 HOH HOH . H 4 HOH A 55 455 70 HOH HOH . H 4 HOH A 56 456 97 HOH HOH . H 4 HOH A 57 457 74 HOH HOH . H 4 HOH A 58 458 29 HOH HOH . H 4 HOH A 59 459 91 HOH HOH . H 4 HOH A 60 460 144 HOH HOH . H 4 HOH A 61 461 41 HOH HOH . H 4 HOH A 62 462 18 HOH HOH . H 4 HOH A 63 463 88 HOH HOH . H 4 HOH A 64 464 10 HOH HOH . H 4 HOH A 65 465 218 HOH HOH . H 4 HOH A 66 466 126 HOH HOH . H 4 HOH A 67 467 47 HOH HOH . H 4 HOH A 68 468 117 HOH HOH . H 4 HOH A 69 469 2 HOH HOH . H 4 HOH A 70 470 166 HOH HOH . H 4 HOH A 71 471 25 HOH HOH . H 4 HOH A 72 472 4 HOH HOH . H 4 HOH A 73 473 223 HOH HOH . H 4 HOH A 74 474 3 HOH HOH . H 4 HOH A 75 475 139 HOH HOH . H 4 HOH A 76 476 220 HOH HOH . H 4 HOH A 77 477 202 HOH HOH . H 4 HOH A 78 478 110 HOH HOH . H 4 HOH A 79 479 1 HOH HOH . H 4 HOH A 80 480 53 HOH HOH . H 4 HOH A 81 481 35 HOH HOH . H 4 HOH A 82 482 119 HOH HOH . H 4 HOH A 83 483 49 HOH HOH . H 4 HOH A 84 484 129 HOH HOH . H 4 HOH A 85 485 5 HOH HOH . H 4 HOH A 86 486 116 HOH HOH . H 4 HOH A 87 487 80 HOH HOH . H 4 HOH A 88 488 44 HOH HOH . H 4 HOH A 89 489 121 HOH HOH . H 4 HOH A 90 490 14 HOH HOH . H 4 HOH A 91 491 63 HOH HOH . H 4 HOH A 92 492 168 HOH HOH . H 4 HOH A 93 493 36 HOH HOH . H 4 HOH A 94 494 230 HOH HOH . H 4 HOH A 95 495 189 HOH HOH . H 4 HOH A 96 496 150 HOH HOH . H 4 HOH A 97 497 243 HOH HOH . H 4 HOH A 98 498 115 HOH HOH . H 4 HOH A 99 499 163 HOH HOH . H 4 HOH A 100 500 105 HOH HOH . H 4 HOH A 101 501 34 HOH HOH . H 4 HOH A 102 502 77 HOH HOH . H 4 HOH A 103 503 195 HOH HOH . H 4 HOH A 104 504 177 HOH HOH . H 4 HOH A 105 505 190 HOH HOH . H 4 HOH A 106 506 59 HOH HOH . H 4 HOH A 107 507 208 HOH HOH . H 4 HOH A 108 508 212 HOH HOH . H 4 HOH A 109 509 217 HOH HOH . H 4 HOH A 110 510 201 HOH HOH . H 4 HOH A 111 511 216 HOH HOH . H 4 HOH A 112 512 187 HOH HOH . H 4 HOH A 113 513 173 HOH HOH . H 4 HOH A 114 514 43 HOH HOH . H 4 HOH A 115 515 32 HOH HOH . H 4 HOH A 116 516 132 HOH HOH . H 4 HOH A 117 517 122 HOH HOH . H 4 HOH A 118 518 238 HOH HOH . H 4 HOH A 119 519 196 HOH HOH . H 4 HOH A 120 520 124 HOH HOH . H 4 HOH A 121 521 149 HOH HOH . H 4 HOH A 122 522 250 HOH HOH . H 4 HOH A 123 523 164 HOH HOH . H 4 HOH A 124 524 145 HOH HOH . H 4 HOH A 125 525 171 HOH HOH . I 4 HOH B 1 401 113 HOH HOH . I 4 HOH B 2 402 135 HOH HOH . I 4 HOH B 3 403 107 HOH HOH . I 4 HOH B 4 404 66 HOH HOH . I 4 HOH B 5 405 99 HOH HOH . I 4 HOH B 6 406 76 HOH HOH . I 4 HOH B 7 407 78 HOH HOH . I 4 HOH B 8 408 22 HOH HOH . I 4 HOH B 9 409 141 HOH HOH . I 4 HOH B 10 410 146 HOH HOH . I 4 HOH B 11 411 178 HOH HOH . I 4 HOH B 12 412 61 HOH HOH . I 4 HOH B 13 413 140 HOH HOH . I 4 HOH B 14 414 94 HOH HOH . I 4 HOH B 15 415 112 HOH HOH . I 4 HOH B 16 416 133 HOH HOH . I 4 HOH B 17 417 8 HOH HOH . I 4 HOH B 18 418 57 HOH HOH . I 4 HOH B 19 419 7 HOH HOH . I 4 HOH B 20 420 186 HOH HOH . I 4 HOH B 21 421 210 HOH HOH . I 4 HOH B 22 422 183 HOH HOH . I 4 HOH B 23 423 138 HOH HOH . I 4 HOH B 24 424 248 HOH HOH . I 4 HOH B 25 425 98 HOH HOH . I 4 HOH B 26 426 235 HOH HOH . I 4 HOH B 27 427 104 HOH HOH . I 4 HOH B 28 428 68 HOH HOH . I 4 HOH B 29 429 181 HOH HOH . I 4 HOH B 30 430 191 HOH HOH . I 4 HOH B 31 431 96 HOH HOH . I 4 HOH B 32 432 9 HOH HOH . I 4 HOH B 33 433 75 HOH HOH . I 4 HOH B 34 434 89 HOH HOH . I 4 HOH B 35 435 155 HOH HOH . I 4 HOH B 36 436 158 HOH HOH . I 4 HOH B 37 437 188 HOH HOH . I 4 HOH B 38 438 58 HOH HOH . I 4 HOH B 39 439 27 HOH HOH . I 4 HOH B 40 440 179 HOH HOH . I 4 HOH B 41 441 11 HOH HOH . I 4 HOH B 42 442 45 HOH HOH . I 4 HOH B 43 443 56 HOH HOH . I 4 HOH B 44 444 30 HOH HOH . I 4 HOH B 45 445 185 HOH HOH . I 4 HOH B 46 446 16 HOH HOH . I 4 HOH B 47 447 237 HOH HOH . I 4 HOH B 48 448 106 HOH HOH . I 4 HOH B 49 449 175 HOH HOH . I 4 HOH B 50 450 151 HOH HOH . I 4 HOH B 51 451 20 HOH HOH . I 4 HOH B 52 452 71 HOH HOH . I 4 HOH B 53 453 118 HOH HOH . I 4 HOH B 54 454 249 HOH HOH . I 4 HOH B 55 455 148 HOH HOH . I 4 HOH B 56 456 231 HOH HOH . I 4 HOH B 57 457 73 HOH HOH . I 4 HOH B 58 458 197 HOH HOH . I 4 HOH B 59 459 84 HOH HOH . I 4 HOH B 60 460 82 HOH HOH . I 4 HOH B 61 461 147 HOH HOH . I 4 HOH B 62 462 127 HOH HOH . I 4 HOH B 63 463 232 HOH HOH . I 4 HOH B 64 464 247 HOH HOH . I 4 HOH B 65 465 161 HOH HOH . I 4 HOH B 66 466 65 HOH HOH . I 4 HOH B 67 467 244 HOH HOH . I 4 HOH B 68 468 134 HOH HOH . I 4 HOH B 69 469 125 HOH HOH . I 4 HOH B 70 470 142 HOH HOH . I 4 HOH B 71 471 137 HOH HOH . I 4 HOH B 72 472 215 HOH HOH . I 4 HOH B 73 473 128 HOH HOH . I 4 HOH B 74 474 194 HOH HOH . I 4 HOH B 75 475 136 HOH HOH . I 4 HOH B 76 476 203 HOH HOH . I 4 HOH B 77 477 130 HOH HOH . I 4 HOH B 78 478 50 HOH HOH . I 4 HOH B 79 479 241 HOH HOH . I 4 HOH B 80 480 38 HOH HOH . I 4 HOH B 81 481 62 HOH HOH . I 4 HOH B 82 482 52 HOH HOH . I 4 HOH B 83 483 162 HOH HOH . I 4 HOH B 84 484 114 HOH HOH . I 4 HOH B 85 485 131 HOH HOH . I 4 HOH B 86 486 176 HOH HOH . I 4 HOH B 87 487 200 HOH HOH . I 4 HOH B 88 488 209 HOH HOH . I 4 HOH B 89 489 219 HOH HOH . I 4 HOH B 90 490 222 HOH HOH . I 4 HOH B 91 491 221 HOH HOH . I 4 HOH B 92 492 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 10.857 _atom_site.Cartn_y -1.111 _atom_site.Cartn_z 22.16 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 800 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #