data_6CSM # _model_server_result.job_id Se_OMiDhm_hcphDZ224Czg _model_server_result.datetime_utc '2025-02-26 21:48:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6csm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":402}' # _entry.id 6CSM # _exptl.entry_id 6CSM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.43 _cell.angle_gamma 90 _cell.entry_id 6CSM _cell.length_a 56.78 _cell.length_b 150.03 _cell.length_c 90.69 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CSM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1 C,D,J,K,L,M,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N ? 3 K N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 6 1_555 B SG CYS 3 B CYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 18 A CYS 21 1_555 A SG CYS 216 A CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 18 B CYS 21 1_555 B SG CYS 216 B CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 C SG CYS 3 C CYS 6 1_555 D SG CYS 3 D CYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 18 C CYS 21 1_555 C SG CYS 216 C CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 D SG CYS 18 D CYS 21 1_555 D SG CYS 216 D CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A NZ LYS 235 A LYS 238 1_555 E C15 RET . A RET 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.473 ? covale ? covale2 B NZ LYS 235 B LYS 238 1_555 H C15 RET . B RET 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.469 ? covale ? covale3 C NZ LYS 235 C LYS 238 1_555 J C15 RET . C RET 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.47 ? covale ? covale4 D NZ LYS 235 D LYS 238 1_555 L C15 RET . D RET 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.473 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 237 n n C1 O2 OLA sing 238 n n C1 C2 OLA sing 239 n n O2 HO2 OLA sing 240 n n C2 C3 OLA sing 241 n n C2 H21 OLA sing 242 n n C2 H22 OLA sing 243 n n C3 C4 OLA sing 244 n n C3 H31 OLA sing 245 n n C3 H32 OLA sing 246 n n C4 C5 OLA sing 247 n n C4 H41 OLA sing 248 n n C4 H42 OLA sing 249 n n C5 C6 OLA sing 250 n n C5 H51 OLA sing 251 n n C5 H52 OLA sing 252 n n C6 C7 OLA sing 253 n n C6 H61 OLA sing 254 n n C6 H62 OLA sing 255 n n C7 C8 OLA sing 256 n n C7 H71 OLA sing 257 n n C7 H72 OLA sing 258 n n C8 C9 OLA sing 259 n n C8 H81 OLA sing 260 n n C8 H82 OLA sing 261 n n C9 C10 OLA doub 262 z n C9 H9 OLA sing 263 n n C10 C11 OLA sing 264 n n C10 H10 OLA sing 265 n n C11 C12 OLA sing 266 n n C11 H111 OLA sing 267 n n C11 H112 OLA sing 268 n n C12 C13 OLA sing 269 n n C12 H121 OLA sing 270 n n C12 H122 OLA sing 271 n n C13 C14 OLA sing 272 n n C13 H131 OLA sing 273 n n C13 H132 OLA sing 274 n n C14 C15 OLA sing 275 n n C14 H141 OLA sing 276 n n C14 H142 OLA sing 277 n n C15 C16 OLA sing 278 n n C15 H151 OLA sing 279 n n C15 H152 OLA sing 280 n n C16 C17 OLA sing 281 n n C16 H161 OLA sing 282 n n C16 H162 OLA sing 283 n n C17 C18 OLA sing 284 n n C17 H171 OLA sing 285 n n C17 H172 OLA sing 286 n n C18 H181 OLA sing 287 n n C18 H182 OLA sing 288 n n C18 H183 OLA sing 289 n n # _atom_sites.entry_id 6CSM _atom_sites.fract_transf_matrix[1][1] 0.017612 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002297 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 RET A 1 401 401 RET RET . F 3 OLA A 1 402 1 OLA OLA . G 3 OLA A 1 403 3 OLA OLA . H 2 RET B 1 401 401 RET RET . I 3 OLA B 1 402 2 OLA OLA . J 2 RET C 1 401 401 RET RET . K 3 OLA C 1 402 5 OLA OLA . L 2 RET D 1 401 401 RET RET . M 3 OLA D 1 402 4 OLA OLA . N 4 HOH A 1 501 3 HOH HOH . O 4 HOH B 1 501 1 HOH HOH . O 4 HOH B 2 502 4 HOH HOH . P 4 HOH C 1 501 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . I 3 38.487 82.058 11.811 1 55.66 ? C1 OLA 402 B 1 HETATM 2 O O1 OLA . . . I 3 37.43 82.291 12.436 1 47.98 ? O1 OLA 402 B 1 HETATM 3 O O2 OLA . . . I 3 38.726 82.695 10.762 1 56.92 ? O2 OLA 402 B 1 HETATM 4 C C2 OLA . . . I 3 39.458 81.021 12.318 1 56.98 ? C2 OLA 402 B 1 HETATM 5 C C3 OLA . . . I 3 38.678 79.81 12.814 1 41.91 ? C3 OLA 402 B 1 HETATM 6 C C4 OLA . . . I 3 38.912 78.617 11.898 1 40.25 ? C4 OLA 402 B 1 HETATM 7 C C5 OLA . . . I 3 37.802 77.587 12.053 1 49.57 ? C5 OLA 402 B 1 HETATM 8 C C6 OLA . . . I 3 38.315 76.191 11.73 1 45.8 ? C6 OLA 402 B 1 HETATM 9 C C7 OLA . . . I 3 37.548 75.14 12.519 1 45.53 ? C7 OLA 402 B 1 HETATM 10 C C8 OLA . . . I 3 38.466 73.99 12.907 1 48.74 ? C8 OLA 402 B 1 HETATM 11 C C9 OLA . . . I 3 37.674 72.953 13.665 1 55.6 ? C9 OLA 402 B 1 HETATM 12 C C10 OLA . . . I 3 38.369 71.802 14.255 1 49.98 ? C10 OLA 402 B 1 HETATM 13 C C11 OLA . . . I 3 39.792 71.514 13.847 1 48.94 ? C11 OLA 402 B 1 HETATM 14 C C12 OLA . . . I 3 39.951 70.022 13.585 1 53.91 ? C12 OLA 402 B 1 HETATM 15 C C13 OLA . . . I 3 39.317 69.654 12.249 1 52.77 ? C13 OLA 402 B 1 HETATM 16 C C14 OLA . . . I 3 39.545 68.184 11.922 1 54.99 ? C14 OLA 402 B 1 HETATM 17 C C15 OLA . . . I 3 39.695 67.98 10.42 1 46.8 ? C15 OLA 402 B 1 HETATM 18 C C16 OLA . . . I 3 39.996 66.522 10.097 1 51.63 ? C16 OLA 402 B 1 HETATM 19 C C17 OLA . . . I 3 40.588 66.381 8.7 1 61.39 ? C17 OLA 402 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 19 #