data_6CTH # _model_server_result.job_id Uej6QGJm0w_PcydJP6RFYQ _model_server_result.datetime_utc '2024-12-25 18:40:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cth # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6CTH # _exptl.entry_id 6CTH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 516.654 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{(3Z)-2-oxo-3-[phenyl({4-[(piperidin-1-yl)methyl]phenyl}amino)methylidene]-2,3-dihydro-1H-indol-5-yl}ethanesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CTH _cell.length_a 56.798 _cell.length_b 56.798 _cell.length_c 358.04 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CTH _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 141 A ASP 393 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc2 A OD2 ASP 159 A ASP 411 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc3 C MG MG . A MG 602 1_555 E O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc4 C MG MG . A MG 602 1_555 E O HOH . A HOH 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc5 C MG MG . A MG 602 1_555 E O HOH . A HOH 767 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc6 C MG MG . A MG 602 1_555 E O HOH . A HOH 816 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? # _chem_comp.formula 'C29 H32 N4 O3 S' _chem_comp.formula_weight 516.654 _chem_comp.id FE7 _chem_comp.mon_nstd_flag . _chem_comp.name N-{(3Z)-2-oxo-3-[phenyl({4-[(piperidin-1-yl)methyl]phenyl}amino)methylidene]-2,3-dihydro-1H-indol-5-yl}ethanesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C27 FE7 sing 89 n n C26 C25 FE7 sing 90 n n C27 C28 FE7 sing 91 n n C25 C24 FE7 sing 92 n n C28 N3 FE7 sing 93 n n C24 N3 FE7 sing 94 n n N3 C23 FE7 sing 95 n n C14 C13 FE7 doub 96 n y C14 C15 FE7 sing 97 n y C23 C20 FE7 sing 98 n n C13 C12 FE7 sing 99 n y C21 C20 FE7 doub 100 n y C21 C22 FE7 sing 101 n y C15 C16 FE7 doub 102 n y C20 C19 FE7 sing 103 n y C22 C17 FE7 doub 104 n y C12 C11 FE7 doub 105 n y C16 C11 FE7 sing 106 n y O S FE7 doub 107 n n C11 C10 FE7 sing 108 n n C19 C18 FE7 doub 109 n y O1 S FE7 doub 110 n n C17 C18 FE7 sing 111 n y C17 N2 FE7 sing 112 n n S C1 FE7 sing 113 n n S N FE7 sing 114 n n C1 C FE7 sing 115 n n C10 N2 FE7 sing 116 n n C10 C9 FE7 doub 117 z n N C2 FE7 sing 118 n n C3 C2 FE7 doub 119 n y C3 C4 FE7 sing 120 n y C9 C4 FE7 sing 121 n n C9 C8 FE7 sing 122 n n C2 C7 FE7 sing 123 n y C4 C5 FE7 doub 124 n y C8 O2 FE7 doub 125 n n C8 N1 FE7 sing 126 n n C7 C6 FE7 doub 127 n y C5 N1 FE7 sing 128 n n C5 C6 FE7 sing 129 n y C14 H1 FE7 sing 130 n n C6 H2 FE7 sing 131 n n C7 H3 FE7 sing 132 n n C12 H5 FE7 sing 133 n n C13 H6 FE7 sing 134 n n N1 H7 FE7 sing 135 n n C3 H8 FE7 sing 136 n n N H10 FE7 sing 137 n n C1 H11 FE7 sing 138 n n C1 H12 FE7 sing 139 n n C H13 FE7 sing 140 n n C H14 FE7 sing 141 n n C H15 FE7 sing 142 n n C16 H16 FE7 sing 143 n n C15 H17 FE7 sing 144 n n C22 H18 FE7 sing 145 n n C21 H19 FE7 sing 146 n n C19 H20 FE7 sing 147 n n C18 H21 FE7 sing 148 n n C23 H22 FE7 sing 149 n n C23 H23 FE7 sing 150 n n C28 H24 FE7 sing 151 n n C28 H25 FE7 sing 152 n n C27 H26 FE7 sing 153 n n C27 H27 FE7 sing 154 n n C26 H28 FE7 sing 155 n n C26 H29 FE7 sing 156 n n C25 H30 FE7 sing 157 n n C25 H31 FE7 sing 158 n n C24 H32 FE7 sing 159 n n C24 H33 FE7 sing 160 n n N2 H4 FE7 sing 161 n n # _atom_sites.entry_id 6CTH _atom_sites.fract_transf_matrix[1][1] 0.017606 _atom_sites.fract_transf_matrix[1][2] 0.010165 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE7 A 1 601 700 FE7 DRG . C 3 MG A 1 602 800 MG MG . D 4 ACT A 1 603 900 ACT ACT . E 5 HOH A 1 701 95 HOH HOH . E 5 HOH A 2 702 49 HOH HOH . E 5 HOH A 3 703 127 HOH HOH . E 5 HOH A 4 704 45 HOH HOH . E 5 HOH A 5 705 108 HOH HOH . E 5 HOH A 6 706 104 HOH HOH . E 5 HOH A 7 707 130 HOH HOH . E 5 HOH A 8 708 57 HOH HOH . E 5 HOH A 9 709 129 HOH HOH . E 5 HOH A 10 710 35 HOH HOH . E 5 HOH A 11 711 16 HOH HOH . E 5 HOH A 12 712 44 HOH HOH . E 5 HOH A 13 713 120 HOH HOH . E 5 HOH A 14 714 1 HOH HOH . E 5 HOH A 15 715 106 HOH HOH . E 5 HOH A 16 716 122 HOH HOH . E 5 HOH A 17 717 50 HOH HOH . E 5 HOH A 18 718 77 HOH HOH . E 5 HOH A 19 719 25 HOH HOH . E 5 HOH A 20 720 132 HOH HOH . E 5 HOH A 21 721 124 HOH HOH . E 5 HOH A 22 722 89 HOH HOH . E 5 HOH A 23 723 94 HOH HOH . E 5 HOH A 24 724 13 HOH HOH . E 5 HOH A 25 725 33 HOH HOH . E 5 HOH A 26 726 78 HOH HOH . E 5 HOH A 27 727 105 HOH HOH . E 5 HOH A 28 728 113 HOH HOH . E 5 HOH A 29 729 53 HOH HOH . E 5 HOH A 30 730 34 HOH HOH . E 5 HOH A 31 731 156 HOH HOH . E 5 HOH A 32 732 147 HOH HOH . E 5 HOH A 33 733 138 HOH HOH . E 5 HOH A 34 734 151 HOH HOH . E 5 HOH A 35 735 126 HOH HOH . E 5 HOH A 36 736 116 HOH HOH . E 5 HOH A 37 737 39 HOH HOH . E 5 HOH A 38 738 114 HOH HOH . E 5 HOH A 39 739 99 HOH HOH . E 5 HOH A 40 740 14 HOH HOH . E 5 HOH A 41 741 125 HOH HOH . E 5 HOH A 42 742 54 HOH HOH . E 5 HOH A 43 743 112 HOH HOH . E 5 HOH A 44 744 154 HOH HOH . E 5 HOH A 45 745 96 HOH HOH . E 5 HOH A 46 746 157 HOH HOH . E 5 HOH A 47 747 98 HOH HOH . E 5 HOH A 48 748 148 HOH HOH . E 5 HOH A 49 749 92 HOH HOH . E 5 HOH A 50 750 51 HOH HOH . E 5 HOH A 51 751 103 HOH HOH . E 5 HOH A 52 752 150 HOH HOH . E 5 HOH A 53 753 102 HOH HOH . E 5 HOH A 54 754 59 HOH HOH . E 5 HOH A 55 755 40 HOH HOH . E 5 HOH A 56 756 48 HOH HOH . E 5 HOH A 57 757 52 HOH HOH . E 5 HOH A 58 758 55 HOH HOH . E 5 HOH A 59 759 2 HOH HOH . E 5 HOH A 60 760 82 HOH HOH . E 5 HOH A 61 761 86 HOH HOH . E 5 HOH A 62 762 140 HOH HOH . E 5 HOH A 63 763 60 HOH HOH . E 5 HOH A 64 764 73 HOH HOH . E 5 HOH A 65 765 69 HOH HOH . E 5 HOH A 66 766 26 HOH HOH . E 5 HOH A 67 767 28 HOH HOH . E 5 HOH A 68 768 75 HOH HOH . E 5 HOH A 69 769 27 HOH HOH . E 5 HOH A 70 770 6 HOH HOH . E 5 HOH A 71 771 62 HOH HOH . E 5 HOH A 72 772 17 HOH HOH . E 5 HOH A 73 773 41 HOH HOH . E 5 HOH A 74 774 29 HOH HOH . E 5 HOH A 75 775 71 HOH HOH . E 5 HOH A 76 776 141 HOH HOH . E 5 HOH A 77 777 10 HOH HOH . E 5 HOH A 78 778 88 HOH HOH . E 5 HOH A 79 779 38 HOH HOH . E 5 HOH A 80 780 7 HOH HOH . E 5 HOH A 81 781 21 HOH HOH . E 5 HOH A 82 782 153 HOH HOH . E 5 HOH A 83 783 8 HOH HOH . E 5 HOH A 84 784 9 HOH HOH . E 5 HOH A 85 785 139 HOH HOH . E 5 HOH A 86 786 11 HOH HOH . E 5 HOH A 87 787 74 HOH HOH . E 5 HOH A 88 788 18 HOH HOH . E 5 HOH A 89 789 149 HOH HOH . E 5 HOH A 90 790 15 HOH HOH . E 5 HOH A 91 791 87 HOH HOH . E 5 HOH A 92 792 152 HOH HOH . E 5 HOH A 93 793 119 HOH HOH . E 5 HOH A 94 794 20 HOH HOH . E 5 HOH A 95 795 46 HOH HOH . E 5 HOH A 96 796 72 HOH HOH . E 5 HOH A 97 797 12 HOH HOH . E 5 HOH A 98 798 70 HOH HOH . E 5 HOH A 99 799 143 HOH HOH . E 5 HOH A 100 800 22 HOH HOH . E 5 HOH A 101 801 24 HOH HOH . E 5 HOH A 102 802 93 HOH HOH . E 5 HOH A 103 803 63 HOH HOH . E 5 HOH A 104 804 76 HOH HOH . E 5 HOH A 105 805 47 HOH HOH . E 5 HOH A 106 806 42 HOH HOH . E 5 HOH A 107 807 145 HOH HOH . E 5 HOH A 108 808 91 HOH HOH . E 5 HOH A 109 809 68 HOH HOH . E 5 HOH A 110 810 117 HOH HOH . E 5 HOH A 111 811 31 HOH HOH . E 5 HOH A 112 812 4 HOH HOH . E 5 HOH A 113 813 118 HOH HOH . E 5 HOH A 114 814 85 HOH HOH . E 5 HOH A 115 815 5 HOH HOH . E 5 HOH A 116 816 56 HOH HOH . E 5 HOH A 117 817 79 HOH HOH . E 5 HOH A 118 818 115 HOH HOH . E 5 HOH A 119 819 110 HOH HOH . E 5 HOH A 120 820 66 HOH HOH . E 5 HOH A 121 821 30 HOH HOH . E 5 HOH A 122 822 101 HOH HOH . E 5 HOH A 123 823 37 HOH HOH . E 5 HOH A 124 824 19 HOH HOH . E 5 HOH A 125 825 134 HOH HOH . E 5 HOH A 126 826 3 HOH HOH . E 5 HOH A 127 827 123 HOH HOH . E 5 HOH A 128 828 84 HOH HOH . E 5 HOH A 129 829 136 HOH HOH . E 5 HOH A 130 830 23 HOH HOH . E 5 HOH A 131 831 121 HOH HOH . E 5 HOH A 132 832 67 HOH HOH . E 5 HOH A 133 833 65 HOH HOH . E 5 HOH A 134 834 135 HOH HOH . E 5 HOH A 135 835 109 HOH HOH . E 5 HOH A 136 836 36 HOH HOH . E 5 HOH A 137 837 64 HOH HOH . E 5 HOH A 138 838 97 HOH HOH . E 5 HOH A 139 839 142 HOH HOH . E 5 HOH A 140 840 32 HOH HOH . E 5 HOH A 141 841 61 HOH HOH . E 5 HOH A 142 842 43 HOH HOH . E 5 HOH A 143 843 81 HOH HOH . E 5 HOH A 144 844 146 HOH HOH . E 5 HOH A 145 845 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 FE7 . . . B 2 -3.519 9.634 13.887 1 27.91 ? C4 FE7 601 A 1 HETATM 2 C C14 FE7 . . . B 2 -2.513 10.249 8.84 1 31.36 ? C14 FE7 601 A 1 HETATM 3 C C5 FE7 . . . B 2 -3.758 9.35 15.244 1 28.83 ? C5 FE7 601 A 1 HETATM 4 C C6 FE7 . . . B 2 -3.253 8.212 15.849 1 29.23 ? C6 FE7 601 A 1 HETATM 5 C C11 FE7 . . . B 2 -3.7 11.198 11.168 1 30.13 ? C11 FE7 601 A 1 HETATM 6 C C7 FE7 . . . B 2 -2.47 7.352 15.101 1 30.73 ? C7 FE7 601 A 1 HETATM 7 C C8 FE7 . . . B 2 -4.819 11.314 14.869 1 28.75 ? C8 FE7 601 A 1 HETATM 8 C C9 FE7 . . . B 2 -4.196 10.886 13.59 1 29.68 ? C9 FE7 601 A 1 HETATM 9 C C10 FE7 . . . B 2 -4.282 11.648 12.445 1 28.69 ? C10 FE7 601 A 1 HETATM 10 C C12 FE7 . . . B 2 -4.224 10.095 10.505 1 30.26 ? C12 FE7 601 A 1 HETATM 11 C C13 FE7 . . . B 2 -3.629 9.625 9.349 1 33.97 ? C13 FE7 601 A 1 HETATM 12 N N1 FE7 . . . B 2 -4.521 10.367 15.789 1 29.07 ? N1 FE7 601 A 1 HETATM 13 N N2 FE7 . . . B 2 -4.829 12.868 12.535 1 30.88 ? N2 FE7 601 A 1 HETATM 14 C C3 FE7 . . . B 2 -2.712 8.765 13.154 1 29.27 ? C3 FE7 601 A 1 HETATM 15 N N3 FE7 . . . B 2 -7.479 17.104 8.475 1 51.39 ? N3 FE7 601 A 1 HETATM 16 O O2 FE7 . . . B 2 -5.485 12.322 15.071 1 31.85 ? O2 FE7 601 A 1 HETATM 17 C C2 FE7 . . . B 2 -2.164 7.642 13.775 1 31.73 ? C2 FE7 601 A 1 HETATM 18 N N FE7 . . . B 2 -1.215 6.8 13.125 1 36.32 ? N FE7 601 A 1 HETATM 19 S S FE7 . . . B 2 -0.578 6.893 11.639 1 38.38 ? S FE7 601 A 1 HETATM 20 O O FE7 . . . B 2 -1.419 7.707 10.821 1 39.2 ? O FE7 601 A 1 HETATM 21 O O1 FE7 . . . B 2 -0.277 5.558 11.229 1 37.85 ? O1 FE7 601 A 1 HETATM 22 C C1 FE7 . . . B 2 0.901 7.754 12.056 1 40.8 ? C1 FE7 601 A 1 HETATM 23 C C FE7 . . . B 2 1.457 7.122 13.308 1 43.41 ? C FE7 601 A 1 HETATM 24 C C16 FE7 . . . B 2 -2.579 11.825 10.64 1 30.7 ? C16 FE7 601 A 1 HETATM 25 C C15 FE7 . . . B 2 -1.99 11.348 9.484 1 33.46 ? C15 FE7 601 A 1 HETATM 26 C C17 FE7 . . . B 2 -5.151 13.875 11.598 1 34.03 ? C17 FE7 601 A 1 HETATM 27 C C22 FE7 . . . B 2 -4.972 13.702 10.233 1 35.17 ? C22 FE7 601 A 1 HETATM 28 C C21 FE7 . . . B 2 -5.262 14.733 9.358 1 35.97 ? C21 FE7 601 A 1 HETATM 29 C C20 FE7 . . . B 2 -5.731 15.953 9.82 1 41.09 ? C20 FE7 601 A 1 HETATM 30 C C19 FE7 . . . B 2 -5.902 16.118 11.184 1 39.04 ? C19 FE7 601 A 1 HETATM 31 C C18 FE7 . . . B 2 -5.621 15.093 12.068 1 36.07 ? C18 FE7 601 A 1 HETATM 32 C C23 FE7 . . . B 2 -6.062 17.07 8.86 1 47.04 ? C23 FE7 601 A 1 HETATM 33 C C28 FE7 . . . B 2 -7.778 18.288 7.668 1 54.34 ? C28 FE7 601 A 1 HETATM 34 C C27 FE7 . . . B 2 -9.252 18.383 7.35 1 57.05 ? C27 FE7 601 A 1 HETATM 35 C C26 FE7 . . . B 2 -9.74 17.134 6.647 1 55.89 ? C26 FE7 601 A 1 HETATM 36 C C25 FE7 . . . B 2 -9.328 15.89 7.408 1 57.39 ? C25 FE7 601 A 1 HETATM 37 C C24 FE7 . . . B 2 -7.849 15.908 7.716 1 53.86 ? C24 FE7 601 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 37 #