data_6CWF # _model_server_result.job_id IORiIDJeAAu-wXM6n3Gd8A _model_server_result.datetime_utc '2024-10-19 10:22:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cwf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6CWF # _exptl.entry_id 6CWF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 305.281 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl 2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranoside' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6CWF _cell.length_a 72 _cell.length_b 72 _cell.length_c 125.567 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CWF _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C12 H19 N O8' _chem_comp.formula_weight 305.281 _chem_comp.id 6LA _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl 2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAK CAB 6LA sing 1 n n OAN CAL 6LA doub 2 n n O6 CAB 6LA sing 3 n n O6 C6 6LA sing 4 n n CAB CAL 6LA sing 5 n n CAB O4 6LA sing 6 n n CAL OAM 6LA sing 7 n n C6 C5 6LA sing 8 n n O4 C4 6LA sing 9 n n C5 C4 6LA sing 10 n n C5 O5 6LA sing 11 n n C4 C3 6LA sing 12 n n O5 C1 6LA sing 13 n n C3 O3 6LA sing 14 n n C3 C2 6LA sing 15 n n C1 C2 6LA sing 16 n n C1 O1 6LA sing 17 n n C2 N2 6LA sing 18 n n N2 C7 6LA sing 19 n n O1 CAU 6LA sing 20 n n C7 C8 6LA sing 21 n n C7 O7 6LA doub 22 n n C8 H1 6LA sing 23 n n C8 H2 6LA sing 24 n n C8 H3 6LA sing 25 n n N2 H4 6LA sing 26 n n C2 H5 6LA sing 27 n n C3 H6 6LA sing 28 n n O3 H7 6LA sing 29 n n C4 H8 6LA sing 30 n n CAK H9 6LA sing 31 n n CAK H10 6LA sing 32 n n CAK H11 6LA sing 33 n n OAM H12 6LA sing 34 n n C6 H13 6LA sing 35 n n C6 H14 6LA sing 36 n n C5 H15 6LA sing 37 n n C1 H16 6LA sing 38 n n CAU H17 6LA sing 39 n n CAU H18 6LA sing 40 n n CAU H19 6LA sing 41 n n # _atom_sites.entry_id 6CWF _atom_sites.fract_transf_matrix[1][1] 0.013889 _atom_sites.fract_transf_matrix[1][2] 0.008019 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016038 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007964 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6LA A 1 201 1 6LA UNK . D 2 6LA B 1 201 2 6LA UNK . E 3 HOH A 1 301 73 HOH HOH . E 3 HOH A 2 302 9 HOH HOH . E 3 HOH A 3 303 84 HOH HOH . E 3 HOH A 4 304 60 HOH HOH . E 3 HOH A 5 305 86 HOH HOH . E 3 HOH A 6 306 23 HOH HOH . E 3 HOH A 7 307 66 HOH HOH . E 3 HOH A 8 308 8 HOH HOH . E 3 HOH A 9 309 22 HOH HOH . E 3 HOH A 10 310 80 HOH HOH . E 3 HOH A 11 311 29 HOH HOH . E 3 HOH A 12 312 45 HOH HOH . E 3 HOH A 13 313 5 HOH HOH . E 3 HOH A 14 314 44 HOH HOH . E 3 HOH A 15 315 15 HOH HOH . E 3 HOH A 16 316 85 HOH HOH . E 3 HOH A 17 317 16 HOH HOH . E 3 HOH A 18 318 71 HOH HOH . E 3 HOH A 19 319 4 HOH HOH . E 3 HOH A 20 320 75 HOH HOH . E 3 HOH A 21 321 47 HOH HOH . E 3 HOH A 22 322 74 HOH HOH . E 3 HOH A 23 323 35 HOH HOH . E 3 HOH A 24 324 58 HOH HOH . E 3 HOH A 25 325 65 HOH HOH . E 3 HOH A 26 326 17 HOH HOH . E 3 HOH A 27 327 38 HOH HOH . E 3 HOH A 28 328 43 HOH HOH . E 3 HOH A 29 329 63 HOH HOH . E 3 HOH A 30 330 25 HOH HOH . E 3 HOH A 31 331 69 HOH HOH . E 3 HOH A 32 332 77 HOH HOH . E 3 HOH A 33 333 90 HOH HOH . E 3 HOH A 34 334 2 HOH HOH . E 3 HOH A 35 335 11 HOH HOH . E 3 HOH A 36 336 41 HOH HOH . E 3 HOH A 37 337 34 HOH HOH . E 3 HOH A 38 338 42 HOH HOH . E 3 HOH A 39 339 21 HOH HOH . E 3 HOH A 40 340 1 HOH HOH . E 3 HOH A 41 341 76 HOH HOH . E 3 HOH A 42 342 55 HOH HOH . E 3 HOH A 43 343 59 HOH HOH . E 3 HOH A 44 344 61 HOH HOH . E 3 HOH A 45 345 78 HOH HOH . E 3 HOH A 46 346 79 HOH HOH . E 3 HOH A 47 347 64 HOH HOH . F 3 HOH B 1 301 68 HOH HOH . F 3 HOH B 2 302 82 HOH HOH . F 3 HOH B 3 303 83 HOH HOH . F 3 HOH B 4 304 49 HOH HOH . F 3 HOH B 5 305 48 HOH HOH . F 3 HOH B 6 306 12 HOH HOH . F 3 HOH B 7 307 81 HOH HOH . F 3 HOH B 8 308 72 HOH HOH . F 3 HOH B 9 309 87 HOH HOH . F 3 HOH B 10 310 88 HOH HOH . F 3 HOH B 11 311 62 HOH HOH . F 3 HOH B 12 312 51 HOH HOH . F 3 HOH B 13 313 33 HOH HOH . F 3 HOH B 14 314 50 HOH HOH . F 3 HOH B 15 315 3 HOH HOH . F 3 HOH B 16 316 46 HOH HOH . F 3 HOH B 17 317 20 HOH HOH . F 3 HOH B 18 318 30 HOH HOH . F 3 HOH B 19 319 52 HOH HOH . F 3 HOH B 20 320 39 HOH HOH . F 3 HOH B 21 321 27 HOH HOH . F 3 HOH B 22 322 89 HOH HOH . F 3 HOH B 23 323 70 HOH HOH . F 3 HOH B 24 324 13 HOH HOH . F 3 HOH B 25 325 6 HOH HOH . F 3 HOH B 26 326 24 HOH HOH . F 3 HOH B 27 327 57 HOH HOH . F 3 HOH B 28 328 7 HOH HOH . F 3 HOH B 29 329 10 HOH HOH . F 3 HOH B 30 330 14 HOH HOH . F 3 HOH B 31 331 26 HOH HOH . F 3 HOH B 32 332 31 HOH HOH . F 3 HOH B 33 333 53 HOH HOH . F 3 HOH B 34 334 54 HOH HOH . F 3 HOH B 35 335 32 HOH HOH . F 3 HOH B 36 336 18 HOH HOH . F 3 HOH B 37 337 37 HOH HOH . F 3 HOH B 38 338 28 HOH HOH . F 3 HOH B 39 339 40 HOH HOH . F 3 HOH B 40 340 19 HOH HOH . F 3 HOH B 41 341 36 HOH HOH . F 3 HOH B 42 342 56 HOH HOH . F 3 HOH B 43 343 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 6LA . . . C 2 -36.268 46.154 14.379 1 51.4 ? C8 6LA 201 A 1 HETATM 2 C C7 6LA . . . C 2 -34.793 46.331 14.709 1 52.85 ? C7 6LA 201 A 1 HETATM 3 O O7 6LA . . . C 2 -34.296 47.444 14.919 1 52.87 ? O7 6LA 201 A 1 HETATM 4 N N2 6LA . . . C 2 -34.109 45.195 14.796 1 50.37 ? N2 6LA 201 A 1 HETATM 5 C C2 6LA . . . C 2 -32.65 45.236 15.115 1 47.27 ? C2 6LA 201 A 1 HETATM 6 C C3 6LA . . . C 2 -32.312 44.528 16.484 1 42.22 ? C3 6LA 201 A 1 HETATM 7 O O3 6LA . . . C 2 -32.972 45.103 17.67 1 39.5 ? O3 6LA 201 A 1 HETATM 8 C C4 6LA . . . C 2 -32.693 43.087 16.385 1 39.16 ? C4 6LA 201 A 1 HETATM 9 O O4 6LA . . . C 2 -32.281 42.453 17.564 1 37.19 ? O4 6LA 201 A 1 HETATM 10 C CAB 6LA . . . C 2 -32.503 41.062 17.649 1 36.44 ? CAB 6LA 201 A 1 HETATM 11 C CAK 6LA . . . C 2 -31.854 40.563 18.968 1 37.64 ? CAK 6LA 201 A 1 HETATM 12 C CAL 6LA . . . C 2 -33.99 40.711 17.684 1 32.52 ? CAL 6LA 201 A 1 HETATM 13 O OAN 6LA . . . C 2 -34.371 39.729 16.981 1 30.16 ? OAN 6LA 201 A 1 HETATM 14 O OAM 6LA . . . C 2 -34.679 41.511 18.314 1 27.63 ? OAM 6LA 201 A 1 HETATM 15 O O6 6LA . . . C 2 -31.986 40.378 16.478 1 40.29 ? O6 6LA 201 A 1 HETATM 16 C C6 6LA . . . C 2 -32.109 40.975 15.2 1 42.5 ? C6 6LA 201 A 1 HETATM 17 C C5 6LA . . . C 2 -31.941 42.496 15.264 1 41.08 ? C5 6LA 201 A 1 HETATM 18 O O5 6LA . . . C 2 -32.318 43.103 14.015 1 46.11 ? O5 6LA 201 A 1 HETATM 19 C C1 6LA . . . C 2 -31.954 44.513 13.985 1 47.19 ? C1 6LA 201 A 1 HETATM 20 O O1 6LA . . . C 2 -32.32 45.088 12.692 1 49.63 ? O1 6LA 201 A 1 HETATM 21 C CAU 6LA . . . C 2 -31.589 44.466 11.588 1 45.97 ? CAU 6LA 201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #