data_6CWY # _model_server_result.job_id FGWUTlljWEyo6DAFApPjhA _model_server_result.datetime_utc '2024-11-22 10:27:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cwy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6CWY # _exptl.entry_id 6CWY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CWY _cell.length_a 56.055 _cell.length_b 116.046 _cell.length_c 174.143 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CWY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 50 D CYS 30 1_555 K C19 FHJ . D FHJ 707 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc1 B O ILE 116 D ILE 96 1_555 F MG MG . D MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc2 B O TYR 121 D TYR 101 1_555 F MG MG . D MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc3 B SG CYS 178 D CYS 158 1_555 E ZN ZN . D ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc4 B SG CYS 181 D CYS 161 1_555 E ZN ZN . D ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc5 B SG CYS 461 D CYS 441 1_555 E ZN ZN . D ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc6 B SG CYS 464 D CYS 444 1_555 E ZN ZN . D ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 190 n n C1 C2 GOL sing 191 n n C1 H11 GOL sing 192 n n C1 H12 GOL sing 193 n n O1 HO1 GOL sing 194 n n C2 O2 GOL sing 195 n n C2 C3 GOL sing 196 n n C2 H2 GOL sing 197 n n O2 HO2 GOL sing 198 n n C3 O3 GOL sing 199 n n C3 H31 GOL sing 200 n n C3 H32 GOL sing 201 n n O3 HO3 GOL sing 202 n n # _atom_sites.entry_id 6CWY _atom_sites.fract_transf_matrix[1][1] 0.01784 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008617 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL C 1 401 2 GOL GOL . D 3 GOL C 1 402 3 GOL GOL . E 4 ZN D 1 701 1 ZN ZN . F 5 MG D 1 702 1 MG MG . G 6 SO4 D 1 703 1 SO4 SO4 . H 6 SO4 D 1 704 1 SO4 SO4 . I 6 SO4 D 1 705 1 SO4 SO4 . J 6 SO4 D 1 706 1 SO4 SO4 . K 7 FHJ D 1 707 1 FHJ LIG . L 8 HOH C 1 501 34 HOH HOH . L 8 HOH C 2 502 6 HOH HOH . L 8 HOH C 3 503 53 HOH HOH . L 8 HOH C 4 504 5 HOH HOH . L 8 HOH C 5 505 32 HOH HOH . L 8 HOH C 6 506 43 HOH HOH . L 8 HOH C 7 507 50 HOH HOH . L 8 HOH C 8 508 38 HOH HOH . L 8 HOH C 9 509 49 HOH HOH . L 8 HOH C 10 510 39 HOH HOH . L 8 HOH C 11 511 33 HOH HOH . L 8 HOH C 12 512 59 HOH HOH . L 8 HOH C 13 513 29 HOH HOH . L 8 HOH C 14 514 45 HOH HOH . L 8 HOH C 15 515 23 HOH HOH . L 8 HOH C 16 516 44 HOH HOH . L 8 HOH C 17 517 47 HOH HOH . L 8 HOH C 18 518 36 HOH HOH . L 8 HOH C 19 519 51 HOH HOH . M 8 HOH D 1 801 1 HOH HOH . M 8 HOH D 2 802 20 HOH HOH . M 8 HOH D 3 803 25 HOH HOH . M 8 HOH D 4 804 2 HOH HOH . M 8 HOH D 5 805 28 HOH HOH . M 8 HOH D 6 806 3 HOH HOH . M 8 HOH D 7 807 58 HOH HOH . M 8 HOH D 8 808 12 HOH HOH . M 8 HOH D 9 809 14 HOH HOH . M 8 HOH D 10 810 22 HOH HOH . M 8 HOH D 11 811 66 HOH HOH . M 8 HOH D 12 812 15 HOH HOH . M 8 HOH D 13 813 24 HOH HOH . M 8 HOH D 14 814 65 HOH HOH . M 8 HOH D 15 815 13 HOH HOH . M 8 HOH D 16 816 16 HOH HOH . M 8 HOH D 17 817 4 HOH HOH . M 8 HOH D 18 818 27 HOH HOH . M 8 HOH D 19 819 21 HOH HOH . M 8 HOH D 20 820 17 HOH HOH . M 8 HOH D 21 821 57 HOH HOH . M 8 HOH D 22 822 11 HOH HOH . M 8 HOH D 23 823 63 HOH HOH . M 8 HOH D 24 824 26 HOH HOH . M 8 HOH D 25 825 55 HOH HOH . M 8 HOH D 26 826 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 152.709 235.634 568.789 1 80.46 ? C1 GOL 401 C 1 HETATM 2 O O1 GOL . . . C 3 151.835 236.735 568.894 1 79.92 ? O1 GOL 401 C 1 HETATM 3 C C2 GOL . . . C 3 154.144 236.106 568.992 1 79.18 ? C2 GOL 401 C 1 HETATM 4 O O2 GOL . . . C 3 154.144 237.347 569.661 1 73.92 ? O2 GOL 401 C 1 HETATM 5 C C3 GOL . . . C 3 154.899 235.08 569.827 1 85.74 ? C3 GOL 401 C 1 HETATM 6 O O3 GOL . . . C 3 156.127 235.629 570.251 1 89.07 ? O3 GOL 401 C 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #