data_6CXM # _model_server_result.job_id uH8kYb_R4JRAJmW6Z-r03g _model_server_result.datetime_utc '2024-12-04 09:57:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 6CXM # _exptl.entry_id 6CXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.408 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.86 _cell.angle_gamma 90 _cell.entry_id 6CXM _cell.length_a 63.25 _cell.length_b 40.3 _cell.length_c 67.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C18 H24 N4 O4' _chem_comp.formula_weight 360.408 _chem_comp.id MMV _chem_comp.mon_nstd_flag . _chem_comp.name '3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 C3 MMV sing 237 n n C3 N4 MMV doub 238 n y C3 N2 MMV sing 239 n y N4 C5 MMV sing 240 n y N2 C1 MMV doub 241 n y C10 C9 MMV sing 242 n n C5 C9 MMV sing 243 n n C5 C6 MMV doub 244 n y O26 C24 MMV doub 245 n n O25 C24 MMV sing 246 n n C1 C6 MMV sing 247 n y C1 N7 MMV sing 248 n n C24 C23 MMV sing 249 n n C6 O11 MMV sing 250 n n C23 C22 MMV sing 251 n n O11 C12 MMV sing 252 n n C12 C13 MMV sing 253 n n C22 C17 MMV sing 254 n n C17 C18 MMV doub 255 n y C17 C16 MMV sing 256 n y C18 C19 MMV sing 257 n y O15 C16 MMV sing 258 n n O15 C14 MMV sing 259 n n C13 C14 MMV sing 260 n n C16 C21 MMV doub 261 n y C19 C20 MMV doub 262 n y C21 C20 MMV sing 263 n y N7 H1 MMV sing 264 n n N7 H2 MMV sing 265 n n N8 H3 MMV sing 266 n n N8 H4 MMV sing 267 n n C9 H5 MMV sing 268 n n C9 H6 MMV sing 269 n n C10 H7 MMV sing 270 n n C10 H8 MMV sing 271 n n C10 H9 MMV sing 272 n n C12 H10 MMV sing 273 n n C12 H11 MMV sing 274 n n C13 H12 MMV sing 275 n n C13 H13 MMV sing 276 n n C14 H14 MMV sing 277 n n C14 H15 MMV sing 278 n n C18 H16 MMV sing 279 n n C19 H17 MMV sing 280 n n C20 H18 MMV sing 281 n n C21 H19 MMV sing 282 n n C22 H20 MMV sing 283 n n C22 H21 MMV sing 284 n n C23 H22 MMV sing 285 n n C23 H23 MMV sing 286 n n O25 H24 MMV sing 287 n n # _atom_sites.entry_id 6CXM _atom_sites.fract_transf_matrix[1][1] 0.01581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001067 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024814 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 201 201 NAP NAP . D 3 MMV A 1 202 202 MMV MMV . E 2 NAP B 1 201 201 NAP NAP . F 3 MMV B 1 202 202 MMV MMV . G 4 HOH A 1 301 32 HOH HOH . G 4 HOH A 2 302 34 HOH HOH . G 4 HOH A 3 303 26 HOH HOH . G 4 HOH A 4 304 22 HOH HOH . G 4 HOH A 5 305 48 HOH HOH . G 4 HOH A 6 306 36 HOH HOH . G 4 HOH A 7 307 24 HOH HOH . G 4 HOH A 8 308 17 HOH HOH . G 4 HOH A 9 309 47 HOH HOH . G 4 HOH A 10 310 4 HOH HOH . G 4 HOH A 11 311 33 HOH HOH . G 4 HOH A 12 312 12 HOH HOH . G 4 HOH A 13 313 8 HOH HOH . G 4 HOH A 14 314 6 HOH HOH . G 4 HOH A 15 315 11 HOH HOH . G 4 HOH A 16 316 1 HOH HOH . G 4 HOH A 17 317 15 HOH HOH . G 4 HOH A 18 318 35 HOH HOH . G 4 HOH A 19 319 23 HOH HOH . G 4 HOH A 20 320 16 HOH HOH . G 4 HOH A 21 321 45 HOH HOH . G 4 HOH A 22 322 2 HOH HOH . G 4 HOH A 23 323 46 HOH HOH . G 4 HOH A 24 324 25 HOH HOH . G 4 HOH A 25 325 31 HOH HOH . G 4 HOH A 26 326 37 HOH HOH . G 4 HOH A 27 327 50 HOH HOH . H 4 HOH B 1 301 20 HOH HOH . H 4 HOH B 2 302 10 HOH HOH . H 4 HOH B 3 303 49 HOH HOH . H 4 HOH B 4 304 13 HOH HOH . H 4 HOH B 5 305 21 HOH HOH . H 4 HOH B 6 306 40 HOH HOH . H 4 HOH B 7 307 28 HOH HOH . H 4 HOH B 8 308 5 HOH HOH . H 4 HOH B 9 309 43 HOH HOH . H 4 HOH B 10 310 19 HOH HOH . H 4 HOH B 11 311 18 HOH HOH . H 4 HOH B 12 312 41 HOH HOH . H 4 HOH B 13 313 27 HOH HOH . H 4 HOH B 14 314 9 HOH HOH . H 4 HOH B 15 315 3 HOH HOH . H 4 HOH B 16 316 39 HOH HOH . H 4 HOH B 17 317 30 HOH HOH . H 4 HOH B 18 318 42 HOH HOH . H 4 HOH B 19 319 44 HOH HOH . H 4 HOH B 20 320 7 HOH HOH . H 4 HOH B 21 321 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MMV . . . D 3 26.518 -5.095 13.36 1 39.36 ? C1 MMV 202 A 1 HETATM 2 N N2 MMV . . . D 3 25.742 -5.822 12.549 1 39.35 ? N2 MMV 202 A 1 HETATM 3 C C3 MMV . . . D 3 25.248 -5.24 11.442 1 40.26 ? C3 MMV 202 A 1 HETATM 4 N N4 MMV . . . D 3 25.499 -3.956 11.099 1 38.96 ? N4 MMV 202 A 1 HETATM 5 C C5 MMV . . . D 3 26.274 -3.212 11.903 1 39.47 ? C5 MMV 202 A 1 HETATM 6 C C6 MMV . . . D 3 26.813 -3.764 13.065 1 39.61 ? C6 MMV 202 A 1 HETATM 7 N N7 MMV . . . D 3 27.018 -5.678 14.485 1 38.13 ? N7 MMV 202 A 1 HETATM 8 N N8 MMV . . . D 3 24.469 -5.975 10.644 1 43.41 ? N8 MMV 202 A 1 HETATM 9 C C9 MMV . . . D 3 26.528 -1.796 11.503 1 40.65 ? C9 MMV 202 A 1 HETATM 10 C C10 MMV . . . D 3 25.429 -0.834 11.928 1 38.69 ? C10 MMV 202 A 1 HETATM 11 O O11 MMV . . . D 3 27.611 -3.056 13.926 1 41.36 ? O11 MMV 202 A 1 HETATM 12 C C12 MMV . . . D 3 26.991 -2.434 15.065 1 41.87 ? C12 MMV 202 A 1 HETATM 13 C C13 MMV . . . D 3 27.935 -1.415 15.66 1 41.96 ? C13 MMV 202 A 1 HETATM 14 C C14 MMV . . . D 3 28.007 -0.113 14.9 1 43.38 ? C14 MMV 202 A 1 HETATM 15 O O15 MMV . . . D 3 26.785 0.604 15.152 1 47.34 ? O15 MMV 202 A 1 HETATM 16 C C16 MMV . . . D 3 26.558 1.777 14.477 1 48.09 ? C16 MMV 202 A 1 HETATM 17 C C17 MMV . . . D 3 25.269 2.315 14.597 1 48.26 ? C17 MMV 202 A 1 HETATM 18 C C18 MMV . . . D 3 24.984 3.501 13.927 1 48.6 ? C18 MMV 202 A 1 HETATM 19 C C19 MMV . . . D 3 25.941 4.136 13.162 1 48.18 ? C19 MMV 202 A 1 HETATM 20 C C20 MMV . . . D 3 27.203 3.598 13.056 1 47.85 ? C20 MMV 202 A 1 HETATM 21 C C21 MMV . . . D 3 27.52 2.42 13.708 1 47.68 ? C21 MMV 202 A 1 HETATM 22 C C22 MMV . . . D 3 24.218 1.618 15.435 1 49.28 ? C22 MMV 202 A 1 HETATM 23 C C23 MMV . . . D 3 23.108 2.556 15.889 1 49.41 ? C23 MMV 202 A 1 HETATM 24 C C24 MMV . . . D 3 22.005 1.931 16.732 1 50.16 ? C24 MMV 202 A 1 HETATM 25 O O25 MMV . . . D 3 21.207 2.7 17.326 1 49.36 ? O25 MMV 202 A 1 HETATM 26 O O26 MMV . . . D 3 21.938 0.677 16.795 1 52.45 ? O26 MMV 202 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #