data_6CYI # _model_server_result.job_id '_avOK8sPfPM2fvLbq4HOqA' _model_server_result.datetime_utc '2024-11-01 03:44:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6cyi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6CYI # _exptl.entry_id 6CYI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6CYI _cell.length_a 89.055 _cell.length_b 100.209 _cell.length_c 63.433 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CYI _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 308 n n C1 C2 PGE sing 309 n n C1 H1 PGE sing 310 n n C1 H12 PGE sing 311 n n O1 HO1 PGE sing 312 n n C2 O2 PGE sing 313 n n C2 H2 PGE sing 314 n n C2 H22 PGE sing 315 n n O2 C3 PGE sing 316 n n C3 C4 PGE sing 317 n n C3 H3 PGE sing 318 n n C3 H32 PGE sing 319 n n C4 O3 PGE sing 320 n n C4 H4 PGE sing 321 n n C4 H42 PGE sing 322 n n O4 C6 PGE sing 323 n n O4 HO4 PGE sing 324 n n C6 C5 PGE sing 325 n n C6 H6 PGE sing 326 n n C6 H62 PGE sing 327 n n C5 O3 PGE sing 328 n n C5 H5 PGE sing 329 n n C5 H52 PGE sing 330 n n # _atom_sites.entry_id 6CYI _atom_sites.fract_transf_matrix[1][1] 0.011229 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009979 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 401 2 PGE PG4 . C 3 PG4 A 1 402 3 PG4 PG4 . D 2 PGE A 1 403 4 PGE PG4 . E 4 N5O A 1 404 1 N5O N5O . F 5 HOH A 1 501 81 HOH HOH . F 5 HOH A 2 502 78 HOH HOH . F 5 HOH A 3 503 89 HOH HOH . F 5 HOH A 4 504 12 HOH HOH . F 5 HOH A 5 505 80 HOH HOH . F 5 HOH A 6 506 1 HOH HOH . F 5 HOH A 7 507 91 HOH HOH . F 5 HOH A 8 508 25 HOH HOH . F 5 HOH A 9 509 74 HOH HOH . F 5 HOH A 10 510 99 HOH HOH . F 5 HOH A 11 511 64 HOH HOH . F 5 HOH A 12 512 48 HOH HOH . F 5 HOH A 13 513 87 HOH HOH . F 5 HOH A 14 514 3 HOH HOH . F 5 HOH A 15 515 62 HOH HOH . F 5 HOH A 16 516 32 HOH HOH . F 5 HOH A 17 517 21 HOH HOH . F 5 HOH A 18 518 47 HOH HOH . F 5 HOH A 19 519 9 HOH HOH . F 5 HOH A 20 520 17 HOH HOH . F 5 HOH A 21 521 72 HOH HOH . F 5 HOH A 22 522 92 HOH HOH . F 5 HOH A 23 523 103 HOH HOH . F 5 HOH A 24 524 14 HOH HOH . F 5 HOH A 25 525 10 HOH HOH . F 5 HOH A 26 526 7 HOH HOH . F 5 HOH A 27 527 8 HOH HOH . F 5 HOH A 28 528 27 HOH HOH . F 5 HOH A 29 529 4 HOH HOH . F 5 HOH A 30 530 11 HOH HOH . F 5 HOH A 31 531 19 HOH HOH . F 5 HOH A 32 532 5 HOH HOH . F 5 HOH A 33 533 20 HOH HOH . F 5 HOH A 34 534 49 HOH HOH . F 5 HOH A 35 535 98 HOH HOH . F 5 HOH A 36 536 15 HOH HOH . F 5 HOH A 37 537 22 HOH HOH . F 5 HOH A 38 538 29 HOH HOH . F 5 HOH A 39 539 35 HOH HOH . F 5 HOH A 40 540 30 HOH HOH . F 5 HOH A 41 541 65 HOH HOH . F 5 HOH A 42 542 34 HOH HOH . F 5 HOH A 43 543 6 HOH HOH . F 5 HOH A 44 544 26 HOH HOH . F 5 HOH A 45 545 28 HOH HOH . F 5 HOH A 46 546 101 HOH HOH . F 5 HOH A 47 547 82 HOH HOH . F 5 HOH A 48 548 33 HOH HOH . F 5 HOH A 49 549 24 HOH HOH . F 5 HOH A 50 550 70 HOH HOH . F 5 HOH A 51 551 18 HOH HOH . F 5 HOH A 52 552 79 HOH HOH . F 5 HOH A 53 553 2 HOH HOH . F 5 HOH A 54 554 13 HOH HOH . F 5 HOH A 55 555 38 HOH HOH . F 5 HOH A 56 556 36 HOH HOH . F 5 HOH A 57 557 45 HOH HOH . F 5 HOH A 58 558 16 HOH HOH . F 5 HOH A 59 559 39 HOH HOH . F 5 HOH A 60 560 73 HOH HOH . F 5 HOH A 61 561 83 HOH HOH . F 5 HOH A 62 562 100 HOH HOH . F 5 HOH A 63 563 46 HOH HOH . F 5 HOH A 64 564 68 HOH HOH . F 5 HOH A 65 565 105 HOH HOH . F 5 HOH A 66 566 53 HOH HOH . F 5 HOH A 67 567 43 HOH HOH . F 5 HOH A 68 568 56 HOH HOH . F 5 HOH A 69 569 40 HOH HOH . F 5 HOH A 70 570 71 HOH HOH . F 5 HOH A 71 571 77 HOH HOH . F 5 HOH A 72 572 93 HOH HOH . F 5 HOH A 73 573 76 HOH HOH . F 5 HOH A 74 574 31 HOH HOH . F 5 HOH A 75 575 23 HOH HOH . F 5 HOH A 76 576 104 HOH HOH . F 5 HOH A 77 577 58 HOH HOH . F 5 HOH A 78 578 41 HOH HOH . F 5 HOH A 79 579 86 HOH HOH . F 5 HOH A 80 580 52 HOH HOH . F 5 HOH A 81 581 63 HOH HOH . F 5 HOH A 82 582 57 HOH HOH . F 5 HOH A 83 583 75 HOH HOH . F 5 HOH A 84 584 67 HOH HOH . F 5 HOH A 85 585 102 HOH HOH . F 5 HOH A 86 586 61 HOH HOH . F 5 HOH A 87 587 88 HOH HOH . F 5 HOH A 88 588 51 HOH HOH . F 5 HOH A 89 589 69 HOH HOH . F 5 HOH A 90 590 85 HOH HOH . F 5 HOH A 91 591 50 HOH HOH . F 5 HOH A 92 592 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 2 18.478 27.898 10.484 1 53.79 ? C1 PGE 403 A 1 HETATM 2 O O1 PGE . . . D 2 18.017 27.02 11.515 1 54.04 ? O1 PGE 403 A 1 HETATM 3 C C2 PGE . . . D 2 17.713 27.619 9.243 1 54.01 ? C2 PGE 403 A 1 HETATM 4 O O2 PGE . . . D 2 18.323 28.303 8.138 1 50.02 ? O2 PGE 403 A 1 HETATM 5 C C3 PGE . . . D 2 17.901 27.777 6.854 1 48.74 ? C3 PGE 403 A 1 HETATM 6 C C4 PGE . . . D 2 18.774 26.561 6.51 1 43.86 ? C4 PGE 403 A 1 HETATM 7 O O4 PGE . . . D 2 19.842 22.43 5.736 1 60.01 ? O4 PGE 403 A 1 HETATM 8 C C6 PGE . . . D 2 18.874 23.412 6.151 1 52.74 ? C6 PGE 403 A 1 HETATM 9 C C5 PGE . . . D 2 18.866 24.583 5.189 1 47.87 ? C5 PGE 403 A 1 HETATM 10 O O3 PGE . . . D 2 18.05 25.654 5.723 1 46.82 ? O3 PGE 403 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 10 #