data_6D0F # _model_server_result.job_id HVem6-uhuG2_WP3Ptf2EQw _model_server_result.datetime_utc '2024-11-14 23:37:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d0f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6D0F # _exptl.entry_id 6D0F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 334.408 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4,4',4''-[(2R)-butane-1,1,2-triyl]triphenol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.04 _cell.angle_gamma 90 _cell.entry_id 6D0F _cell.length_a 54.007 _cell.length_b 82.992 _cell.length_c 58.587 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D0F _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C22 H22 O3' _chem_comp.formula_weight 334.408 _chem_comp.id FYS _chem_comp.mon_nstd_flag . _chem_comp.name "4,4',4''-[(2R)-butane-1,1,2-triyl]triphenol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ CAP FYS doub 83 n y CAJ CAX FYS sing 84 n y CAP CBA FYS sing 85 n y CAG CAM FYS doub 86 n y CAG CAW FYS sing 87 n y OAD CAW FYS sing 88 n n CAM CAZ FYS sing 89 n y OAS CAX FYS sing 90 n n CAW CAH FYS doub 91 n y CAX CAI FYS doub 92 n y CAZ CAU FYS sing 93 n n CAZ CAN FYS doub 94 n y CBA CAU FYS sing 95 n n CBA CAO FYS doub 96 n y CAH CAN FYS sing 97 n y CAU CAT FYS sing 98 n n CAI CAO FYS sing 99 n y CAR CAT FYS sing 100 n n CAR CAB FYS sing 101 n n CAT CAY FYS sing 102 n n CAK CAY FYS doub 103 n y CAK CAE FYS sing 104 n y CAY CAL FYS sing 105 n y CAE CAV FYS doub 106 n y CAL CAF FYS doub 107 n y CAV CAF FYS sing 108 n y CAV OAC FYS sing 109 n n CAB H1 FYS sing 110 n n CAB H2 FYS sing 111 n n CAB H3 FYS sing 112 n n OAC H4 FYS sing 113 n n OAD H5 FYS sing 114 n n CAE H6 FYS sing 115 n n CAF H7 FYS sing 116 n n CAG H8 FYS sing 117 n n CAH H9 FYS sing 118 n n CAI H10 FYS sing 119 n n CAJ H11 FYS sing 120 n n CAK H12 FYS sing 121 n n CAL H13 FYS sing 122 n n CAM H14 FYS sing 123 n n CAN H15 FYS sing 124 n n CAO H16 FYS sing 125 n n CAP H17 FYS sing 126 n n CAR H18 FYS sing 127 n n CAR H19 FYS sing 128 n n OAS H20 FYS sing 129 n n CAT H21 FYS sing 130 n n CAU H22 FYS sing 131 n n # _atom_sites.entry_id 6D0F _atom_sites.fract_transf_matrix[1][1] 0.018516 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007123 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012049 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FYS A 1 601 1 FYS DRG . F 3 FYS B 1 601 2 FYS DRG . G 4 HOH A 1 701 35 HOH HOH . G 4 HOH A 2 702 15 HOH HOH . G 4 HOH A 3 703 49 HOH HOH . G 4 HOH A 4 704 55 HOH HOH . G 4 HOH A 5 705 10 HOH HOH . G 4 HOH A 6 706 19 HOH HOH . G 4 HOH A 7 707 40 HOH HOH . G 4 HOH A 8 708 42 HOH HOH . G 4 HOH A 9 709 45 HOH HOH . G 4 HOH A 10 710 7 HOH HOH . G 4 HOH A 11 711 3 HOH HOH . G 4 HOH A 12 712 67 HOH HOH . G 4 HOH A 13 713 33 HOH HOH . G 4 HOH A 14 714 14 HOH HOH . G 4 HOH A 15 715 8 HOH HOH . G 4 HOH A 16 716 2 HOH HOH . G 4 HOH A 17 717 43 HOH HOH . G 4 HOH A 18 718 68 HOH HOH . G 4 HOH A 19 719 34 HOH HOH . G 4 HOH A 20 720 11 HOH HOH . G 4 HOH A 21 721 31 HOH HOH . G 4 HOH A 22 722 24 HOH HOH . G 4 HOH A 23 723 21 HOH HOH . G 4 HOH A 24 724 51 HOH HOH . G 4 HOH A 25 725 48 HOH HOH . G 4 HOH A 26 726 50 HOH HOH . G 4 HOH A 27 727 29 HOH HOH . G 4 HOH A 28 728 59 HOH HOH . G 4 HOH A 29 729 69 HOH HOH . G 4 HOH A 30 730 44 HOH HOH . G 4 HOH A 31 731 53 HOH HOH . G 4 HOH A 32 732 58 HOH HOH . G 4 HOH A 33 733 65 HOH HOH . H 4 HOH B 1 701 4 HOH HOH . H 4 HOH B 2 702 66 HOH HOH . H 4 HOH B 3 703 62 HOH HOH . H 4 HOH B 4 704 16 HOH HOH . H 4 HOH B 5 705 56 HOH HOH . H 4 HOH B 6 706 57 HOH HOH . H 4 HOH B 7 707 39 HOH HOH . H 4 HOH B 8 708 25 HOH HOH . H 4 HOH B 9 709 5 HOH HOH . H 4 HOH B 10 710 9 HOH HOH . H 4 HOH B 11 711 6 HOH HOH . H 4 HOH B 12 712 60 HOH HOH . H 4 HOH B 13 713 18 HOH HOH . H 4 HOH B 14 714 23 HOH HOH . H 4 HOH B 15 715 27 HOH HOH . H 4 HOH B 16 716 30 HOH HOH . H 4 HOH B 17 717 36 HOH HOH . H 4 HOH B 18 718 1 HOH HOH . H 4 HOH B 19 719 26 HOH HOH . H 4 HOH B 20 720 70 HOH HOH . H 4 HOH B 21 721 46 HOH HOH . H 4 HOH B 22 722 17 HOH HOH . H 4 HOH B 23 723 12 HOH HOH . H 4 HOH B 24 724 20 HOH HOH . H 4 HOH B 25 725 41 HOH HOH . H 4 HOH B 26 726 22 HOH HOH . H 4 HOH B 27 727 28 HOH HOH . H 4 HOH B 28 728 61 HOH HOH . H 4 HOH B 29 729 72 HOH HOH . H 4 HOH B 30 730 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB FYS . . . E 3 -15.012 7.721 50.693 1 52.42 ? CAB FYS 601 A 1 HETATM 2 O OAC FYS . . . E 3 -20.309 3.501 52.298 1 58.95 ? OAC FYS 601 A 1 HETATM 3 O OAD FYS . . . E 3 -16.916 -0.593 47.644 1 53.05 ? OAD FYS 601 A 1 HETATM 4 C CAE FYS . . . E 3 -19.105 5.108 50.934 1 57.33 ? CAE FYS 601 A 1 HETATM 5 C CAF FYS . . . E 3 -17.919 3.262 51.94 1 56.67 ? CAF FYS 601 A 1 HETATM 6 C CAG FYS . . . E 3 -17.112 1.798 47.398 1 52.54 ? CAG FYS 601 A 1 HETATM 7 C CAH FYS . . . E 3 -15.283 0.884 48.657 1 47.94 ? CAH FYS 601 A 1 HETATM 8 C CAI FYS . . . E 3 -11.247 5.29 49.213 1 40.45 ? CAI FYS 601 A 1 HETATM 9 C CAJ FYS . . . E 3 -11.586 4.724 46.902 1 35.19 ? CAJ FYS 601 A 1 HETATM 10 C CAK FYS . . . E 3 -17.911 5.556 50.366 1 56.65 ? CAK FYS 601 A 1 HETATM 11 C CAL FYS . . . E 3 -16.725 3.71 51.373 1 55.4 ? CAL FYS 601 A 1 HETATM 12 C CAM FYS . . . E 3 -16.639 3.078 47.651 1 52.96 ? CAM FYS 601 A 1 HETATM 13 C CAN FYS . . . E 3 -14.81 2.166 48.91 1 47.7 ? CAN FYS 601 A 1 HETATM 14 C CAO FYS . . . E 3 -12.617 5.168 49.446 1 40.44 ? CAO FYS 601 A 1 HETATM 15 C CAP FYS . . . E 3 -12.957 4.605 47.134 1 36.74 ? CAP FYS 601 A 1 HETATM 16 C CAR FYS . . . E 3 -15.647 6.833 49.641 1 53.14 ? CAR FYS 601 A 1 HETATM 17 O OAS FYS . . . E 3 -9.354 5.185 47.701 1 41.22 ? OAS FYS 601 A 1 HETATM 18 C CAT FYS . . . E 3 -15.434 5.377 49.956 1 54.45 ? CAT FYS 601 A 1 HETATM 19 C CAU FYS . . . E 3 -15.002 4.698 48.658 1 53 ? CAU FYS 601 A 1 HETATM 20 C CAV FYS . . . E 3 -19.106 3.957 51.722 1 57.79 ? CAV FYS 601 A 1 HETATM 21 C CAW FYS . . . E 3 -16.431 0.704 47.903 1 51.34 ? CAW FYS 601 A 1 HETATM 22 C CAX FYS . . . E 3 -10.736 5.065 47.939 1 38.79 ? CAX FYS 601 A 1 HETATM 23 C CAY FYS . . . E 3 -16.725 4.856 50.572 1 55.72 ? CAY FYS 601 A 1 HETATM 24 C CAZ FYS . . . E 3 -15.497 3.262 48.406 1 51.31 ? CAZ FYS 601 A 1 HETATM 25 C CBA FYS . . . E 3 -13.472 4.824 48.407 1 39.66 ? CBA FYS 601 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #