data_6D1X # _model_server_result.job_id aY8yK4p3LDwiLvnfLj8SJg _model_server_result.datetime_utc '2024-11-22 20:11:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d1x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6D1X # _exptl.entry_id 6D1X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6D1X _cell.length_a 89.467 _cell.length_b 99.654 _cell.length_c 63.191 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D1X _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 280 n n O1 HO1 PG4 sing 281 n n C1 C2 PG4 sing 282 n n C1 H11 PG4 sing 283 n n C1 H12 PG4 sing 284 n n C2 O2 PG4 sing 285 n n C2 H21 PG4 sing 286 n n C2 H22 PG4 sing 287 n n O2 C3 PG4 sing 288 n n C3 C4 PG4 sing 289 n n C3 H31 PG4 sing 290 n n C3 H32 PG4 sing 291 n n C4 O3 PG4 sing 292 n n C4 H41 PG4 sing 293 n n C4 H42 PG4 sing 294 n n O3 C5 PG4 sing 295 n n C5 C6 PG4 sing 296 n n C5 H51 PG4 sing 297 n n C5 H52 PG4 sing 298 n n C6 O4 PG4 sing 299 n n C6 H61 PG4 sing 300 n n C6 H62 PG4 sing 301 n n O4 C7 PG4 sing 302 n n C7 C8 PG4 sing 303 n n C7 H71 PG4 sing 304 n n C7 H72 PG4 sing 305 n n C8 O5 PG4 sing 306 n n C8 H81 PG4 sing 307 n n C8 H82 PG4 sing 308 n n O5 HO5 PG4 sing 309 n n # _atom_sites.entry_id 6D1X _atom_sites.fract_transf_matrix[1][1] 0.011177 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010035 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015825 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PA7 A 1 401 1 PA7 PA7 . C 3 PG4 A 1 402 339 PG4 PG4 . D 3 PG4 A 1 403 340 PG4 PG4 . E 3 PG4 A 1 404 341 PG4 PG4 . F 4 HOH A 1 501 441 HOH HOH . F 4 HOH A 2 502 411 HOH HOH . F 4 HOH A 3 503 406 HOH HOH . F 4 HOH A 4 504 390 HOH HOH . F 4 HOH A 5 505 410 HOH HOH . F 4 HOH A 6 506 391 HOH HOH . F 4 HOH A 7 507 404 HOH HOH . F 4 HOH A 8 508 442 HOH HOH . F 4 HOH A 9 509 357 HOH HOH . F 4 HOH A 10 510 376 HOH HOH . F 4 HOH A 11 511 387 HOH HOH . F 4 HOH A 12 512 418 HOH HOH . F 4 HOH A 13 513 359 HOH HOH . F 4 HOH A 14 514 385 HOH HOH . F 4 HOH A 15 515 399 HOH HOH . F 4 HOH A 16 516 362 HOH HOH . F 4 HOH A 17 517 423 HOH HOH . F 4 HOH A 18 518 388 HOH HOH . F 4 HOH A 19 519 343 HOH HOH . F 4 HOH A 20 520 438 HOH HOH . F 4 HOH A 21 521 345 HOH HOH . F 4 HOH A 22 522 414 HOH HOH . F 4 HOH A 23 523 365 HOH HOH . F 4 HOH A 24 524 348 HOH HOH . F 4 HOH A 25 525 421 HOH HOH . F 4 HOH A 26 526 379 HOH HOH . F 4 HOH A 27 527 344 HOH HOH . F 4 HOH A 28 528 351 HOH HOH . F 4 HOH A 29 529 355 HOH HOH . F 4 HOH A 30 530 403 HOH HOH . F 4 HOH A 31 531 352 HOH HOH . F 4 HOH A 32 532 405 HOH HOH . F 4 HOH A 33 533 358 HOH HOH . F 4 HOH A 34 534 360 HOH HOH . F 4 HOH A 35 535 380 HOH HOH . F 4 HOH A 36 536 408 HOH HOH . F 4 HOH A 37 537 347 HOH HOH . F 4 HOH A 38 538 367 HOH HOH . F 4 HOH A 39 539 375 HOH HOH . F 4 HOH A 40 540 444 HOH HOH . F 4 HOH A 41 541 440 HOH HOH . F 4 HOH A 42 542 354 HOH HOH . F 4 HOH A 43 543 394 HOH HOH . F 4 HOH A 44 544 346 HOH HOH . F 4 HOH A 45 545 427 HOH HOH . F 4 HOH A 46 546 363 HOH HOH . F 4 HOH A 47 547 401 HOH HOH . F 4 HOH A 48 548 420 HOH HOH . F 4 HOH A 49 549 342 HOH HOH . F 4 HOH A 50 550 407 HOH HOH . F 4 HOH A 51 551 353 HOH HOH . F 4 HOH A 52 552 397 HOH HOH . F 4 HOH A 53 553 349 HOH HOH . F 4 HOH A 54 554 378 HOH HOH . F 4 HOH A 55 555 432 HOH HOH . F 4 HOH A 56 556 389 HOH HOH . F 4 HOH A 57 557 368 HOH HOH . F 4 HOH A 58 558 412 HOH HOH . F 4 HOH A 59 559 361 HOH HOH . F 4 HOH A 60 560 415 HOH HOH . F 4 HOH A 61 561 428 HOH HOH . F 4 HOH A 62 562 386 HOH HOH . F 4 HOH A 63 563 383 HOH HOH . F 4 HOH A 64 564 384 HOH HOH . F 4 HOH A 65 565 413 HOH HOH . F 4 HOH A 66 566 356 HOH HOH . F 4 HOH A 67 567 426 HOH HOH . F 4 HOH A 68 568 392 HOH HOH . F 4 HOH A 69 569 454 HOH HOH . F 4 HOH A 70 570 422 HOH HOH . F 4 HOH A 71 571 366 HOH HOH . F 4 HOH A 72 572 435 HOH HOH . F 4 HOH A 73 573 402 HOH HOH . F 4 HOH A 74 574 416 HOH HOH . F 4 HOH A 75 575 381 HOH HOH . F 4 HOH A 76 576 382 HOH HOH . F 4 HOH A 77 577 409 HOH HOH . F 4 HOH A 78 578 434 HOH HOH . F 4 HOH A 79 579 393 HOH HOH . F 4 HOH A 80 580 372 HOH HOH . F 4 HOH A 81 581 398 HOH HOH . F 4 HOH A 82 582 364 HOH HOH . F 4 HOH A 83 583 419 HOH HOH . F 4 HOH A 84 584 436 HOH HOH . F 4 HOH A 85 585 400 HOH HOH . F 4 HOH A 86 586 430 HOH HOH . F 4 HOH A 87 587 395 HOH HOH . F 4 HOH A 88 588 424 HOH HOH . F 4 HOH A 89 589 377 HOH HOH . F 4 HOH A 90 590 449 HOH HOH . F 4 HOH A 91 591 448 HOH HOH . F 4 HOH A 92 592 350 HOH HOH . F 4 HOH A 93 593 429 HOH HOH . F 4 HOH A 94 594 437 HOH HOH . F 4 HOH A 95 595 455 HOH HOH . F 4 HOH A 96 596 369 HOH HOH . F 4 HOH A 97 597 459 HOH HOH . F 4 HOH A 98 598 417 HOH HOH . F 4 HOH A 99 599 370 HOH HOH . F 4 HOH A 100 600 425 HOH HOH . F 4 HOH A 101 601 447 HOH HOH . F 4 HOH A 102 602 371 HOH HOH . F 4 HOH A 103 603 453 HOH HOH . F 4 HOH A 104 604 457 HOH HOH . F 4 HOH A 105 605 450 HOH HOH . F 4 HOH A 106 606 373 HOH HOH . F 4 HOH A 107 607 452 HOH HOH . F 4 HOH A 108 608 445 HOH HOH . F 4 HOH A 109 609 458 HOH HOH . F 4 HOH A 110 610 433 HOH HOH . F 4 HOH A 111 611 460 HOH HOH . F 4 HOH A 112 612 396 HOH HOH . F 4 HOH A 113 613 446 HOH HOH . F 4 HOH A 114 614 451 HOH HOH . F 4 HOH A 115 615 461 HOH HOH . F 4 HOH A 116 616 443 HOH HOH . F 4 HOH A 117 617 374 HOH HOH . F 4 HOH A 118 618 456 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 3 28.077 29.64 35.509 1 45.17 ? O1 PG4 403 A 1 HETATM 2 C C1 PG4 . . . D 3 27.986 28.478 36.289 1 45.21 ? C1 PG4 403 A 1 HETATM 3 C C2 PG4 . . . D 3 29.349 28.091 36.86 1 42.32 ? C2 PG4 403 A 1 HETATM 4 O O2 PG4 . . . D 3 29.202 27.713 38.207 1 48.28 ? O2 PG4 403 A 1 HETATM 5 C C3 PG4 . . . D 3 30.347 27.915 38.998 1 44.82 ? C3 PG4 403 A 1 HETATM 6 C C4 PG4 . . . D 3 30.086 28.853 40.183 1 50.22 ? C4 PG4 403 A 1 HETATM 7 O O3 PG4 . . . D 3 31.308 29.393 40.631 1 54.86 ? O3 PG4 403 A 1 HETATM 8 C C5 PG4 . . . D 3 31.373 30.798 40.663 1 55.33 ? C5 PG4 403 A 1 HETATM 9 C C6 PG4 . . . D 3 32.833 31.265 40.624 1 60.2 ? C6 PG4 403 A 1 HETATM 10 O O4 PG4 . . . D 3 33.012 32.251 39.636 1 57.26 ? O4 PG4 403 A 1 HETATM 11 C C7 PG4 . . . D 3 32.05 33.266 39.668 1 54.88 ? C7 PG4 403 A 1 HETATM 12 C C8 PG4 . . . D 3 32.074 34.019 38.342 1 58.58 ? C8 PG4 403 A 1 HETATM 13 O O5 PG4 . . . D 3 33.386 33.99 37.856 1 57.63 ? O5 PG4 403 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 430 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #