data_6D1Z # _model_server_result.job_id p7fg_TrxZtqZ5b1rFFhZvg _model_server_result.datetime_utc '2024-11-14 23:45:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d1z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 6D1Z # _exptl.entry_id 6D1Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.88 _cell.angle_gamma 90 _cell.entry_id 6D1Z _cell.length_a 113.15 _cell.length_b 45.66 _cell.length_c 78.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D1Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 206 n n C1 C2 GOL sing 207 n n C1 H11 GOL sing 208 n n C1 H12 GOL sing 209 n n O1 HO1 GOL sing 210 n n C2 O2 GOL sing 211 n n C2 C3 GOL sing 212 n n C2 H2 GOL sing 213 n n O2 HO2 GOL sing 214 n n C3 O3 GOL sing 215 n n C3 H31 GOL sing 216 n n C3 H32 GOL sing 217 n n O3 HO3 GOL sing 218 n n # _atom_sites.entry_id 6D1Z _atom_sites.fract_transf_matrix[1][1] 0.008838 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006631 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FQD A 1 801 1 FQD UNL . C 3 GOL A 1 802 1 GOL GOL . D 4 FQM A 1 803 1 FQM UN2 . E 5 HOH A 1 901 57 HOH HOH . E 5 HOH A 2 902 49 HOH HOH . E 5 HOH A 3 903 51 HOH HOH . E 5 HOH A 4 904 24 HOH HOH . E 5 HOH A 5 905 23 HOH HOH . E 5 HOH A 6 906 55 HOH HOH . E 5 HOH A 7 907 35 HOH HOH . E 5 HOH A 8 908 26 HOH HOH . E 5 HOH A 9 909 8 HOH HOH . E 5 HOH A 10 910 33 HOH HOH . E 5 HOH A 11 911 54 HOH HOH . E 5 HOH A 12 912 22 HOH HOH . E 5 HOH A 13 913 46 HOH HOH . E 5 HOH A 14 914 1 HOH HOH . E 5 HOH A 15 915 49 HOH HOH . E 5 HOH A 16 916 3 HOH HOH . E 5 HOH A 17 917 94 HOH HOH . E 5 HOH A 18 918 17 HOH HOH . E 5 HOH A 19 919 119 HOH HOH . E 5 HOH A 20 920 6 HOH HOH . E 5 HOH A 21 921 27 HOH HOH . E 5 HOH A 22 922 47 HOH HOH . E 5 HOH A 23 923 44 HOH HOH . E 5 HOH A 24 924 3 HOH HOH . E 5 HOH A 25 925 87 HOH HOH . E 5 HOH A 26 926 57 HOH HOH . E 5 HOH A 27 927 6 HOH HOH . E 5 HOH A 28 928 76 HOH HOH . E 5 HOH A 29 929 52 HOH HOH . E 5 HOH A 30 930 40 HOH HOH . E 5 HOH A 31 931 50 HOH HOH . E 5 HOH A 32 932 5 HOH HOH . E 5 HOH A 33 933 22 HOH HOH . E 5 HOH A 34 934 45 HOH HOH . E 5 HOH A 35 935 28 HOH HOH . E 5 HOH A 36 936 34 HOH HOH . E 5 HOH A 37 937 21 HOH HOH . E 5 HOH A 38 938 44 HOH HOH . E 5 HOH A 39 939 5 HOH HOH . E 5 HOH A 40 940 10 HOH HOH . E 5 HOH A 41 941 18 HOH HOH . E 5 HOH A 42 942 53 HOH HOH . E 5 HOH A 43 943 35 HOH HOH . E 5 HOH A 44 944 107 HOH HOH . E 5 HOH A 45 945 62 HOH HOH . E 5 HOH A 46 946 11 HOH HOH . E 5 HOH A 47 947 20 HOH HOH . E 5 HOH A 48 948 117 HOH HOH . E 5 HOH A 49 949 12 HOH HOH . E 5 HOH A 50 950 51 HOH HOH . E 5 HOH A 51 951 54 HOH HOH . E 5 HOH A 52 952 15 HOH HOH . E 5 HOH A 53 953 53 HOH HOH . E 5 HOH A 54 954 19 HOH HOH . E 5 HOH A 55 955 128 HOH HOH . E 5 HOH A 56 956 15 HOH HOH . E 5 HOH A 57 957 110 HOH HOH . E 5 HOH A 58 958 97 HOH HOH . E 5 HOH A 59 959 50 HOH HOH . E 5 HOH A 60 960 41 HOH HOH . E 5 HOH A 61 961 23 HOH HOH . E 5 HOH A 62 962 14 HOH HOH . E 5 HOH A 63 963 4 HOH HOH . E 5 HOH A 64 964 72 HOH HOH . E 5 HOH A 65 965 122 HOH HOH . E 5 HOH A 66 966 102 HOH HOH . E 5 HOH A 67 967 83 HOH HOH . E 5 HOH A 68 968 43 HOH HOH . E 5 HOH A 69 969 59 HOH HOH . E 5 HOH A 70 970 29 HOH HOH . E 5 HOH A 71 971 8 HOH HOH . E 5 HOH A 72 972 28 HOH HOH . E 5 HOH A 73 973 92 HOH HOH . E 5 HOH A 74 974 103 HOH HOH . E 5 HOH A 75 975 66 HOH HOH . E 5 HOH A 76 976 30 HOH HOH . E 5 HOH A 77 977 114 HOH HOH . E 5 HOH A 78 978 45 HOH HOH . E 5 HOH A 79 979 31 HOH HOH . E 5 HOH A 80 980 73 HOH HOH . E 5 HOH A 81 981 27 HOH HOH . E 5 HOH A 82 982 9 HOH HOH . E 5 HOH A 83 983 9 HOH HOH . E 5 HOH A 84 984 19 HOH HOH . E 5 HOH A 85 985 13 HOH HOH . E 5 HOH A 86 986 38 HOH HOH . E 5 HOH A 87 987 18 HOH HOH . E 5 HOH A 88 988 42 HOH HOH . E 5 HOH A 89 989 1 HOH HOH . E 5 HOH A 90 990 16 HOH HOH . E 5 HOH A 91 991 64 HOH HOH . E 5 HOH A 92 992 2 HOH HOH . E 5 HOH A 93 993 75 HOH HOH . E 5 HOH A 94 994 29 HOH HOH . E 5 HOH A 95 995 4 HOH HOH . E 5 HOH A 96 996 90 HOH HOH . E 5 HOH A 97 997 20 HOH HOH . E 5 HOH A 98 998 82 HOH HOH . E 5 HOH A 99 999 46 HOH HOH . E 5 HOH A 100 1000 58 HOH HOH . E 5 HOH A 101 1001 98 HOH HOH . E 5 HOH A 102 1002 2 HOH HOH . E 5 HOH A 103 1003 16 HOH HOH . E 5 HOH A 104 1004 56 HOH HOH . E 5 HOH A 105 1005 32 HOH HOH . E 5 HOH A 106 1006 14 HOH HOH . E 5 HOH A 107 1007 81 HOH HOH . E 5 HOH A 108 1008 25 HOH HOH . E 5 HOH A 109 1009 7 HOH HOH . E 5 HOH A 110 1010 13 HOH HOH . E 5 HOH A 111 1011 37 HOH HOH . E 5 HOH A 112 1012 43 HOH HOH . E 5 HOH A 113 1013 69 HOH HOH . E 5 HOH A 114 1014 21 HOH HOH . E 5 HOH A 115 1015 125 HOH HOH . E 5 HOH A 116 1016 106 HOH HOH . E 5 HOH A 117 1017 39 HOH HOH . E 5 HOH A 118 1018 41 HOH HOH . E 5 HOH A 119 1019 31 HOH HOH . E 5 HOH A 120 1020 11 HOH HOH . E 5 HOH A 121 1021 33 HOH HOH . E 5 HOH A 122 1022 74 HOH HOH . E 5 HOH A 123 1023 84 HOH HOH . E 5 HOH A 124 1024 118 HOH HOH . E 5 HOH A 125 1025 85 HOH HOH . E 5 HOH A 126 1026 10 HOH HOH . E 5 HOH A 127 1027 79 HOH HOH . E 5 HOH A 128 1028 30 HOH HOH . E 5 HOH A 129 1029 104 HOH HOH . E 5 HOH A 130 1030 63 HOH HOH . E 5 HOH A 131 1031 80 HOH HOH . E 5 HOH A 132 1032 17 HOH HOH . E 5 HOH A 133 1033 38 HOH HOH . E 5 HOH A 134 1034 55 HOH HOH . E 5 HOH A 135 1035 67 HOH HOH . E 5 HOH A 136 1036 48 HOH HOH . E 5 HOH A 137 1037 26 HOH HOH . E 5 HOH A 138 1038 100 HOH HOH . E 5 HOH A 139 1039 96 HOH HOH . E 5 HOH A 140 1040 32 HOH HOH . E 5 HOH A 141 1041 7 HOH HOH . E 5 HOH A 142 1042 42 HOH HOH . E 5 HOH A 143 1043 25 HOH HOH . E 5 HOH A 144 1044 86 HOH HOH . E 5 HOH A 145 1045 130 HOH HOH . E 5 HOH A 146 1046 47 HOH HOH . E 5 HOH A 147 1047 108 HOH HOH . E 5 HOH A 148 1048 121 HOH HOH . E 5 HOH A 149 1049 95 HOH HOH . E 5 HOH A 150 1050 36 HOH HOH . E 5 HOH A 151 1051 36 HOH HOH . E 5 HOH A 152 1052 52 HOH HOH . E 5 HOH A 153 1053 89 HOH HOH . E 5 HOH A 154 1054 124 HOH HOH . E 5 HOH A 155 1055 112 HOH HOH . E 5 HOH A 156 1056 12 HOH HOH . E 5 HOH A 157 1057 127 HOH HOH . E 5 HOH A 158 1058 37 HOH HOH . E 5 HOH A 159 1059 60 HOH HOH . E 5 HOH A 160 1060 71 HOH HOH . E 5 HOH A 161 1061 56 HOH HOH . E 5 HOH A 162 1062 129 HOH HOH . E 5 HOH A 163 1063 109 HOH HOH . E 5 HOH A 164 1064 40 HOH HOH . E 5 HOH A 165 1065 123 HOH HOH . E 5 HOH A 166 1066 24 HOH HOH . E 5 HOH A 167 1067 105 HOH HOH . E 5 HOH A 168 1068 70 HOH HOH . E 5 HOH A 169 1069 48 HOH HOH . E 5 HOH A 170 1070 61 HOH HOH . E 5 HOH A 171 1071 116 HOH HOH . E 5 HOH A 172 1072 78 HOH HOH . E 5 HOH A 173 1073 101 HOH HOH . E 5 HOH A 174 1074 120 HOH HOH . E 5 HOH A 175 1075 39 HOH HOH . E 5 HOH A 176 1076 65 HOH HOH . E 5 HOH A 177 1077 126 HOH HOH . E 5 HOH A 178 1078 132 HOH HOH . E 5 HOH A 179 1079 88 HOH HOH . E 5 HOH A 180 1080 68 HOH HOH . E 5 HOH A 181 1081 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -19.283 3.047 -25.152 1 55.6 ? C1 GOL 802 A 1 HETATM 2 O O1 GOL . . . C 3 -19.942 2.495 -24.02 1 55.47 ? O1 GOL 802 A 1 HETATM 3 C C2 GOL . . . C 3 -20.09 2.811 -26.406 1 56.97 ? C2 GOL 802 A 1 HETATM 4 O O2 GOL . . . C 3 -21.393 3.389 -26.256 1 56.41 ? O2 GOL 802 A 1 HETATM 5 C C3 GOL . . . C 3 -19.382 3.404 -27.601 1 56.91 ? C3 GOL 802 A 1 HETATM 6 O O3 GOL . . . C 3 -19.966 2.991 -28.832 1 56.89 ? O3 GOL 802 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #