data_6D24 # _model_server_result.job_id LOljRJEfRmQf1t8-bD7ucw _model_server_result.datetime_utc '2024-11-24 00:54:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d24 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":607}' # _entry.id 6D24 # _exptl.entry_id 6D24 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.27 _cell.angle_gamma 90 _cell.entry_id 6D24 _cell.length_a 96.79 _cell.length_b 133.03 _cell.length_c 107.75 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D24 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 FA N N ? 4 GA N N ? 4 HA N N ? 4 VA N N ? 4 WA N N ? 4 XA N N ? 4 YA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 39 A CYS 53 1_555 A SG CYS 121 A CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 514 A CYS 528 1_555 A SG CYS 538 A CYS 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf3 B SG CYS 39 B CYS 53 1_555 B SG CYS 121 B CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 B SG CYS 514 B CYS 528 1_555 B SG CYS 538 B CYS 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf5 C SG CYS 39 C CYS 53 1_555 C SG CYS 121 C CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 D SG CYS 39 D CYS 53 1_555 D SG CYS 121 D CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? covale ? covale1 C C SER 513 C SER 527 1_555 C N CSO 514 C CSO 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale2 C C CSO 514 C CSO 528 1_555 C N GLY 515 C GLY 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 D C SER 513 D SER 527 1_555 D N CSO 514 D CSO 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale4 D C CSO 514 D CSO 528 1_555 D N GLY 515 D GLY 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 346 n n S O2 SO4 doub 347 n n S O3 SO4 sing 348 n n S O4 SO4 sing 349 n n # _atom_sites.entry_id 6D24 _atom_sites.fract_transf_matrix[1][1] 0.010332 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001872 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009432 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 BG6 A 1 601 601 BG6 BG6 . F 4 SO4 A 1 602 602 SO4 SO4 . G 4 SO4 A 1 603 603 SO4 SO4 . H 4 SO4 A 1 604 604 SO4 SO4 . I 4 SO4 A 1 605 605 SO4 SO4 . J 4 SO4 A 1 606 606 SO4 SO4 . K 5 GOL A 1 607 801 GOL GOL . L 5 GOL A 1 608 802 GOL GOL . M 6 CL A 1 609 901 CL CL . N 6 CL A 1 610 903 CL CL . O 6 CL A 1 611 905 CL CL . P 5 GOL A 1 612 804 GOL GOL . Q 6 CL B 1 601 904 CL CL . R 3 BG6 B 1 602 601 BG6 BG6 . S 4 SO4 B 1 603 602 SO4 SO4 . T 4 SO4 B 1 604 603 SO4 SO4 . U 4 SO4 B 1 605 604 SO4 SO4 . V 4 SO4 B 1 606 605 SO4 SO4 . W 4 SO4 B 1 607 606 SO4 SO4 . X 5 GOL B 1 608 801 GOL GOL . Y 6 CL B 1 609 901 CL CL . Z 6 CL B 1 610 902 CL CL . AA 6 CL B 1 611 903 CL CL . BA 6 CL B 1 612 904 CL CL . CA 6 CL B 1 613 902 CL CL . DA 5 GOL C 1 601 802 GOL GOL . EA 3 BG6 C 1 602 601 BG6 BG6 . FA 4 SO4 C 1 603 602 SO4 SO4 . GA 4 SO4 C 1 604 603 SO4 SO4 . HA 4 SO4 C 1 605 604 SO4 SO4 . IA 5 GOL C 1 606 801 GOL GOL . JA 5 GOL C 1 607 802 GOL GOL . KA 5 GOL C 1 608 803 GOL GOL . LA 5 GOL C 1 609 805 GOL GOL . MA 6 CL C 1 610 901 CL CL . NA 6 CL C 1 611 903 CL CL . OA 6 CL C 1 612 904 CL CL . PA 6 CL C 1 613 905 CL CL . QA 6 CL C 1 614 906 CL CL . RA 6 CL C 1 615 907 CL CL . SA 5 GOL C 1 616 803 GOL GOL . TA 6 CL D 1 601 902 CL CL . UA 3 BG6 D 1 602 601 BG6 BG6 . VA 4 SO4 D 1 603 602 SO4 SO4 . WA 4 SO4 D 1 604 603 SO4 SO4 . XA 4 SO4 D 1 605 604 SO4 SO4 . YA 4 SO4 D 1 606 605 SO4 SO4 . ZA 5 GOL D 1 607 801 GOL GOL . AB 5 GOL D 1 608 802 GOL GOL . BB 5 GOL D 1 609 804 GOL GOL . CB 5 GOL D 1 610 805 GOL GOL . DB 6 CL D 1 611 901 CL CL . EB 6 CL D 1 612 902 CL CL . FB 6 CL D 1 613 903 CL CL . GB 6 CL D 1 614 904 CL CL . HB 6 CL D 1 615 905 CL CL . IB 6 CL D 1 616 906 CL CL . JB 6 CL D 1 617 907 CL CL . KB 7 HOH A 1 701 704 HOH HOH . KB 7 HOH A 2 702 753 HOH HOH . KB 7 HOH A 3 703 751 HOH HOH . KB 7 HOH A 4 704 764 HOH HOH . KB 7 HOH A 5 705 706 HOH HOH . KB 7 HOH A 6 706 752 HOH HOH . KB 7 HOH A 7 707 707 HOH HOH . KB 7 HOH A 8 708 765 HOH HOH . LB 7 HOH B 1 701 713 HOH HOH . LB 7 HOH B 2 702 716 HOH HOH . LB 7 HOH B 3 703 712 HOH HOH . LB 7 HOH B 4 704 709 HOH HOH . LB 7 HOH B 5 705 715 HOH HOH . LB 7 HOH B 6 706 714 HOH HOH . LB 7 HOH B 7 707 710 HOH HOH . LB 7 HOH B 8 708 711 HOH HOH . LB 7 HOH B 9 709 708 HOH HOH . MB 7 HOH C 1 701 701 HOH HOH . MB 7 HOH C 2 702 712 HOH HOH . MB 7 HOH C 3 703 720 HOH HOH . MB 7 HOH C 4 704 710 HOH HOH . MB 7 HOH C 5 705 713 HOH HOH . MB 7 HOH C 6 706 716 HOH HOH . MB 7 HOH C 7 707 711 HOH HOH . MB 7 HOH C 8 708 718 HOH HOH . MB 7 HOH C 9 709 708 HOH HOH . MB 7 HOH C 10 710 715 HOH HOH . MB 7 HOH C 11 711 703 HOH HOH . MB 7 HOH C 12 712 709 HOH HOH . MB 7 HOH C 13 713 719 HOH HOH . MB 7 HOH C 14 714 717 HOH HOH . MB 7 HOH C 15 715 714 HOH HOH . MB 7 HOH C 16 716 705 HOH HOH . MB 7 HOH C 17 717 702 HOH HOH . NB 7 HOH D 1 701 713 HOH HOH . NB 7 HOH D 2 702 708 HOH HOH . NB 7 HOH D 3 703 711 HOH HOH . NB 7 HOH D 4 704 704 HOH HOH . NB 7 HOH D 5 705 703 HOH HOH . NB 7 HOH D 6 706 709 HOH HOH . NB 7 HOH D 7 707 707 HOH HOH . NB 7 HOH D 8 708 702 HOH HOH . NB 7 HOH D 9 709 705 HOH HOH . NB 7 HOH D 10 710 701 HOH HOH . NB 7 HOH D 11 711 712 HOH HOH . NB 7 HOH D 12 712 706 HOH HOH . NB 7 HOH D 13 713 710 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . W 4 15.085 -74.254 13.97 1 72.75 ? S SO4 607 B 1 HETATM 2 O O1 SO4 . . . W 4 16.211 -75.173 13.812 1 71.48 ? O1 SO4 607 B 1 HETATM 3 O O2 SO4 . . . W 4 14.929 -73.513 12.714 1 73.46 ? O2 SO4 607 B 1 HETATM 4 O O3 SO4 . . . W 4 13.876 -75.017 14.312 1 71.18 ? O3 SO4 607 B 1 HETATM 5 O O4 SO4 . . . W 4 15.357 -73.298 15.048 1 74.03 ? O4 SO4 607 B 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #