data_6D26 # _model_server_result.job_id Xcd5ZiPSIvJSnU_mdIeCfA _model_server_result.datetime_utc '2024-11-23 04:40:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d26 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2401}' # _entry.id 6D26 # _exptl.entry_id 6D26 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 426.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description fevipiprant _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6D26 _cell.length_a 50.457 _cell.length_b 61.71 _cell.length_c 266.517 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D26 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 11 1_555 A SG CYS 200 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 105 A CYS 104 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A C THR 432 A THR 2307 1_555 A N YCM 433 A YCM 2308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C YCM 433 A YCM 2308 1_555 A N PRO 434 A PRO 2309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C19 H17 F3 N2 O4 S' _chem_comp.formula_weight 426.409 _chem_comp.id FSY _chem_comp.mon_nstd_flag . _chem_comp.name fevipiprant _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2-methyl-1-{[4-(methylsulfonyl)-2-(trifluoromethyl)phenyl]methyl}-1H-pyrrolo[2,3-b]pyridin-3-yl)acetic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O28 S26 FSY doub 83 n n C29 S26 FSY sing 84 n n O27 S26 FSY doub 85 n n S26 C19 FSY sing 86 n n C19 C20 FSY doub 87 n y C19 C18 FSY sing 88 n y C20 C21 FSY sing 89 n y C18 C17 FSY doub 90 n y F24 C22 FSY sing 91 n n C21 C22 FSY sing 92 n n C21 C16 FSY doub 93 n y F23 C22 FSY sing 94 n n C22 F25 FSY sing 95 n n C17 C16 FSY sing 96 n y C16 C15 FSY sing 97 n n C07 C06 FSY sing 98 n n C15 N08 FSY sing 99 n n C06 N08 FSY sing 100 n y C06 C05 FSY doub 101 n y N08 C09 FSY sing 102 n y O03 C02 FSY doub 103 n n C05 C04 FSY sing 104 n n C05 C10 FSY sing 105 n y C02 C04 FSY sing 106 n n C02 O01 FSY sing 107 n n C09 N14 FSY doub 108 n y C09 C10 FSY sing 109 n y N14 C13 FSY sing 110 n y C10 C11 FSY doub 111 n y C13 C12 FSY doub 112 n y C11 C12 FSY sing 113 n y O01 H1 FSY sing 114 n n C04 H2 FSY sing 115 n n C04 H3 FSY sing 116 n n C07 H4 FSY sing 117 n n C07 H5 FSY sing 118 n n C07 H6 FSY sing 119 n n C11 H7 FSY sing 120 n n C12 H8 FSY sing 121 n n C13 H9 FSY sing 122 n n C15 H10 FSY sing 123 n n C15 H11 FSY sing 124 n n C17 H12 FSY sing 125 n n C18 H13 FSY sing 126 n n C20 H14 FSY sing 127 n n C29 H15 FSY sing 128 n n C29 H16 FSY sing 129 n n C29 H17 FSY sing 130 n n # _atom_sites.entry_id 6D26 _atom_sites.fract_transf_matrix[1][1] 0.019819 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016205 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FSY A 1 2401 1 FSY FEV . C 3 SO4 A 1 2402 1 SO4 SO4 . D 3 SO4 A 1 2403 2 SO4 SO4 . E 3 SO4 A 1 2404 3 SO4 SO4 . F 3 SO4 A 1 2405 4 SO4 SO4 . G 3 SO4 A 1 2406 5 SO4 SO4 . H 3 SO4 A 1 2407 6 SO4 SO4 . I 3 SO4 A 1 2408 7 SO4 SO4 . J 3 SO4 A 1 2409 8 SO4 SO4 . K 3 SO4 A 1 2410 9 SO4 SO4 . L 4 SIN A 1 2411 1 SIN SIN . M 4 SIN A 1 2412 3 SIN SIN . N 4 SIN A 1 2413 4 SIN SIN . O 4 SIN A 1 2414 7 SIN SIN . P 4 SIN A 1 2415 8 SIN SIN . Q 5 PGE A 1 2416 1 PGE PGE . R 6 OLA A 1 2417 1 OLA OLA . S 7 PGO A 1 2418 1 PGO PGO . T 8 HOH A 1 2501 5 HOH HOH . T 8 HOH A 2 2502 2 HOH HOH . T 8 HOH A 3 2503 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 FSY . . . B 2 0.687 85.789 283.702 1 60.96 ? O01 FSY 2401 A 1 HETATM 2 C C02 FSY . . . B 2 1.833 85.29 283.426 1 64.4 ? C02 FSY 2401 A 1 HETATM 3 O O03 FSY . . . B 2 1.915 84.139 283.038 1 65.01 ? O03 FSY 2401 A 1 HETATM 4 C C04 FSY . . . B 2 3.095 86.151 283.593 1 66.45 ? C04 FSY 2401 A 1 HETATM 5 C C05 FSY . . . B 2 4.456 85.378 283.39 1 58.99 ? C05 FSY 2401 A 1 HETATM 6 C C06 FSY . . . B 2 5.573 85.801 282.633 1 61.4 ? C06 FSY 2401 A 1 HETATM 7 C C07 FSY . . . B 2 5.677 87.123 281.842 1 60.88 ? C07 FSY 2401 A 1 HETATM 8 N N08 FSY . . . B 2 6.508 84.905 282.712 1 64.86 ? N08 FSY 2401 A 1 HETATM 9 C C09 FSY . . . B 2 6.11 83.871 283.483 1 62.38 ? C09 FSY 2401 A 1 HETATM 10 C C10 FSY . . . B 2 4.834 84.117 283.936 1 58.57 ? C10 FSY 2401 A 1 HETATM 11 C C11 FSY . . . B 2 4.228 83.141 284.767 1 57.23 ? C11 FSY 2401 A 1 HETATM 12 C C12 FSY . . . B 2 4.967 81.983 285.081 1 58.63 ? C12 FSY 2401 A 1 HETATM 13 C C13 FSY . . . B 2 6.24 81.834 284.578 1 59.52 ? C13 FSY 2401 A 1 HETATM 14 N N14 FSY . . . B 2 6.778 82.771 283.797 1 62.06 ? N14 FSY 2401 A 1 HETATM 15 C C15 FSY . . . B 2 7.772 85.002 282.079 1 69.19 ? C15 FSY 2401 A 1 HETATM 16 C C16 FSY . . . B 2 7.64 84.702 280.531 1 92.62 ? C16 FSY 2401 A 1 HETATM 17 C C17 FSY . . . B 2 6.819 83.642 280.138 1 93.95 ? C17 FSY 2401 A 1 HETATM 18 C C18 FSY . . . B 2 6.661 83.33 278.79 1 95.44 ? C18 FSY 2401 A 1 HETATM 19 C C19 FSY . . . B 2 7.318 84.078 277.833 1 96.06 ? C19 FSY 2401 A 1 HETATM 20 C C20 FSY . . . B 2 8.127 85.13 278.208 1 95.93 ? C20 FSY 2401 A 1 HETATM 21 C C21 FSY . . . B 2 8.302 85.455 279.568 1 92.88 ? C21 FSY 2401 A 1 HETATM 22 C C22 FSY . . . B 2 9.222 86.64 279.88 1 91.77 ? C22 FSY 2401 A 1 HETATM 23 S S26 FSY . . . B 2 7.11 83.672 276.077 1 74.32 ? S26 FSY 2401 A 1 HETATM 24 O O27 FSY . . . B 2 6.927 82.131 275.934 1 61.42 ? O27 FSY 2401 A 1 HETATM 25 O O28 FSY . . . B 2 8.329 84.118 275.314 1 76.97 ? O28 FSY 2401 A 1 HETATM 26 C C29 FSY . . . B 2 5.655 84.531 275.436 1 43.03 ? C29 FSY 2401 A 1 HETATM 27 F F23 FSY . . . B 2 8.568 87.728 279.706 1 88.1 ? F23 FSY 2401 A 1 HETATM 28 F F24 FSY . . . B 2 10.249 86.615 279.028 1 92.52 ? F24 FSY 2401 A 1 HETATM 29 F F25 FSY . . . B 2 9.75 86.609 281.208 1 96.41 ? F25 FSY 2401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 29 #