data_6D27 # _model_server_result.job_id ZJ0OTWpo1HfH1ckkwIo6iw _model_server_result.datetime_utc '2024-11-05 08:30:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d27 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":2418}' # _entry.id 6D27 # _exptl.entry_id 6D27 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6D27 _cell.length_a 52.175 _cell.length_b 62.636 _cell.length_c 272.215 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D27 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id S _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 11 1_555 A SG CYS 200 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 105 A CYS 104 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A C THR 432 A THR 2307 1_555 A N YCM 433 A YCM 2308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C YCM 433 A YCM 2308 1_555 A N PRO 434 A PRO 2309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 368 n n C1 C2 PEG sing 369 n n C1 H11 PEG sing 370 n n C1 H12 PEG sing 371 n n O1 HO1 PEG sing 372 n n C2 O2 PEG sing 373 n n C2 H21 PEG sing 374 n n C2 H22 PEG sing 375 n n O2 C3 PEG sing 376 n n C3 C4 PEG sing 377 n n C3 H31 PEG sing 378 n n C3 H32 PEG sing 379 n n C4 O4 PEG sing 380 n n C4 H41 PEG sing 381 n n C4 H42 PEG sing 382 n n O4 HO4 PEG sing 383 n n # _atom_sites.entry_id 6D27 _atom_sites.fract_transf_matrix[1][1] 0.019166 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015965 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003674 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 2401 1 SO4 SO4 . C 2 SO4 A 1 2402 2 SO4 SO4 . D 2 SO4 A 1 2403 3 SO4 SO4 . E 2 SO4 A 1 2404 5 SO4 SO4 . F 2 SO4 A 1 2405 7 SO4 SO4 . G 2 SO4 A 1 2406 8 SO4 SO4 . H 2 SO4 A 1 2407 9 SO4 SO4 . I 3 FT4 A 1 2408 1 FT4 ZIN . J 4 MES A 1 2409 1 MES MES . K 5 OLA A 1 2410 1 OLA OLA . L 5 OLA A 1 2411 2 OLA OLA . M 6 PGE A 1 2412 1 PGE PGE . N 6 PGE A 1 2413 2 PGE PGE . O 7 PGO A 1 2414 1 PGO PGO . P 7 PGO A 1 2415 2 PGO PGO . Q 7 PGO A 1 2416 3 PGO PGO . R 7 PGO A 1 2417 4 PGO PGO . S 8 PEG A 1 2418 1 PEG PEG . T 9 HOH A 1 2501 4 HOH HOH . T 9 HOH A 2 2502 5 HOH HOH . T 9 HOH A 3 2503 2 HOH HOH . T 9 HOH A 4 2504 3 HOH HOH . T 9 HOH A 5 2505 8 HOH HOH . T 9 HOH A 6 2506 11 HOH HOH . T 9 HOH A 7 2507 12 HOH HOH . T 9 HOH A 8 2508 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . S 8 51.308 -42.357 296.966 1 86.63 ? C1 PEG 2418 A 1 HETATM 2 O O1 PEG . . . S 8 50.328 -41.317 297.08 1 84.85 ? O1 PEG 2418 A 1 HETATM 3 C C2 PEG . . . S 8 52.708 -41.778 297.151 1 94.24 ? C2 PEG 2418 A 1 HETATM 4 O O2 PEG . . . S 8 53.471 -42.024 295.971 1 103.38 ? O2 PEG 2418 A 1 HETATM 5 C C3 PEG . . . S 8 54.541 -41.088 295.826 1 108.71 ? C3 PEG 2418 A 1 HETATM 6 C C4 PEG . . . S 8 54.701 -40.754 294.343 1 109.5 ? C4 PEG 2418 A 1 HETATM 7 O O4 PEG . . . S 8 55.712 -39.745 294.202 1 108.62 ? O4 PEG 2418 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #