data_6D3E # _model_server_result.job_id M9q27WDxfe_HG9foPlxcTQ _model_server_result.datetime_utc '2024-11-26 11:05:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6D3E # _exptl.entry_id 6D3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 432.505 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(2,4-difluorophenyl)methyl]-2,3-dimethyl-N-[(1R)-1-phenylpropyl]-1H-indole-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.32 _cell.angle_gamma 90 _cell.entry_id 6D3E _cell.length_a 93.04 _cell.length_b 62.51 _cell.length_c 118.65 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.52 31.255 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H26 F2 N2 O' _chem_comp.formula_weight 432.505 _chem_comp.id FT7 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(2,4-difluorophenyl)methyl]-2,3-dimethyl-N-[(1R)-1-phenylpropyl]-1H-indole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F32 C28 FT7 sing 83 n n C28 C27 FT7 doub 84 n y C28 C29 FT7 sing 85 n y C27 C26 FT7 sing 86 n y C29 C30 FT7 doub 87 n y C26 F31 FT7 sing 88 n n C26 C25 FT7 doub 89 n y C30 C25 FT7 sing 90 n y C25 C24 FT7 sing 91 n n C24 N19 FT7 sing 92 n n C23 C20 FT7 sing 93 n n N19 C20 FT7 sing 94 n y N19 C16 FT7 sing 95 n y C20 C21 FT7 doub 96 n y C16 C15 FT7 doub 97 n y C16 C17 FT7 sing 98 n y C15 C14 FT7 sing 99 n y C21 C17 FT7 sing 100 n y C21 C22 FT7 sing 101 n n C17 C18 FT7 doub 102 n y C14 C12 FT7 doub 103 n y C18 C12 FT7 sing 104 n y C12 C11 FT7 sing 105 n n C11 O13 FT7 doub 106 n n C11 N08 FT7 sing 107 n n N08 C07 FT7 sing 108 n n C06 C01 FT7 doub 109 n y C06 C05 FT7 sing 110 n y C01 C02 FT7 sing 111 n y C07 C05 FT7 sing 112 n n C07 C09 FT7 sing 113 n n C05 C04 FT7 doub 114 n y C02 C03 FT7 doub 115 n y C09 C10 FT7 sing 116 n n C04 C03 FT7 sing 117 n y C10 H1 FT7 sing 118 n n C10 H2 FT7 sing 119 n n C10 H3 FT7 sing 120 n n C15 H4 FT7 sing 121 n n C22 H5 FT7 sing 122 n n C22 H6 FT7 sing 123 n n C22 H7 FT7 sing 124 n n C24 H8 FT7 sing 125 n n C24 H9 FT7 sing 126 n n C01 H10 FT7 sing 127 n n C02 H11 FT7 sing 128 n n C03 H12 FT7 sing 129 n n C04 H13 FT7 sing 130 n n C06 H14 FT7 sing 131 n n C07 H15 FT7 sing 132 n n C09 H16 FT7 sing 133 n n C09 H17 FT7 sing 134 n n C14 H18 FT7 sing 135 n n C18 H19 FT7 sing 136 n n C23 H20 FT7 sing 137 n n C23 H21 FT7 sing 138 n n C23 H22 FT7 sing 139 n n C27 H23 FT7 sing 140 n n C29 H24 FT7 sing 141 n n C30 H25 FT7 sing 142 n n N08 H26 FT7 sing 143 n n # _atom_sites.entry_id 6D3E _atom_sites.fract_transf_matrix[1][1] 0.010748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002347 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FT7 A 1 501 1 FT7 LIG . D 3 HOH A 1 601 94 HOH HOH . D 3 HOH A 2 602 196 HOH HOH . D 3 HOH A 3 603 40 HOH HOH . D 3 HOH A 4 604 5 HOH HOH . D 3 HOH A 5 605 13 HOH HOH . D 3 HOH A 6 606 142 HOH HOH . D 3 HOH A 7 607 56 HOH HOH . D 3 HOH A 8 608 51 HOH HOH . D 3 HOH A 9 609 22 HOH HOH . D 3 HOH A 10 610 189 HOH HOH . D 3 HOH A 11 611 6 HOH HOH . D 3 HOH A 12 612 64 HOH HOH . D 3 HOH A 13 613 143 HOH HOH . D 3 HOH A 14 614 19 HOH HOH . D 3 HOH A 15 615 154 HOH HOH . D 3 HOH A 16 616 10 HOH HOH . D 3 HOH A 17 617 191 HOH HOH . D 3 HOH A 18 618 31 HOH HOH . D 3 HOH A 19 619 14 HOH HOH . D 3 HOH A 20 620 99 HOH HOH . D 3 HOH A 21 621 39 HOH HOH . D 3 HOH A 22 622 23 HOH HOH . D 3 HOH A 23 623 15 HOH HOH . D 3 HOH A 24 624 18 HOH HOH . D 3 HOH A 25 625 44 HOH HOH . D 3 HOH A 26 626 7 HOH HOH . D 3 HOH A 27 627 100 HOH HOH . D 3 HOH A 28 628 101 HOH HOH . D 3 HOH A 29 629 11 HOH HOH . D 3 HOH A 30 630 147 HOH HOH . D 3 HOH A 31 631 167 HOH HOH . D 3 HOH A 32 632 38 HOH HOH . D 3 HOH A 33 633 193 HOH HOH . D 3 HOH A 34 634 149 HOH HOH . D 3 HOH A 35 635 79 HOH HOH . D 3 HOH A 36 636 25 HOH HOH . D 3 HOH A 37 637 37 HOH HOH . D 3 HOH A 38 638 146 HOH HOH . D 3 HOH A 39 639 34 HOH HOH . D 3 HOH A 40 640 111 HOH HOH . D 3 HOH A 41 641 161 HOH HOH . D 3 HOH A 42 642 102 HOH HOH . D 3 HOH A 43 643 95 HOH HOH . D 3 HOH A 44 644 26 HOH HOH . D 3 HOH A 45 645 36 HOH HOH . D 3 HOH A 46 646 2 HOH HOH . D 3 HOH A 47 647 47 HOH HOH . D 3 HOH A 48 648 136 HOH HOH . D 3 HOH A 49 649 103 HOH HOH . D 3 HOH A 50 650 113 HOH HOH . D 3 HOH A 51 651 83 HOH HOH . D 3 HOH A 52 652 91 HOH HOH . D 3 HOH A 53 653 165 HOH HOH . D 3 HOH A 54 654 133 HOH HOH . D 3 HOH A 55 655 81 HOH HOH . D 3 HOH A 56 656 52 HOH HOH . D 3 HOH A 57 657 163 HOH HOH . D 3 HOH A 58 658 98 HOH HOH . D 3 HOH A 59 659 68 HOH HOH . D 3 HOH A 60 660 74 HOH HOH . D 3 HOH A 61 661 20 HOH HOH . D 3 HOH A 62 662 82 HOH HOH . D 3 HOH A 63 663 141 HOH HOH . D 3 HOH A 64 664 151 HOH HOH . D 3 HOH A 65 665 197 HOH HOH . D 3 HOH A 66 666 92 HOH HOH . D 3 HOH A 67 667 185 HOH HOH . D 3 HOH A 68 668 54 HOH HOH . D 3 HOH A 69 669 41 HOH HOH . D 3 HOH A 70 670 50 HOH HOH . D 3 HOH A 71 671 156 HOH HOH . D 3 HOH A 72 672 43 HOH HOH . D 3 HOH A 73 673 162 HOH HOH . D 3 HOH A 74 674 73 HOH HOH . D 3 HOH A 75 675 144 HOH HOH . D 3 HOH A 76 676 169 HOH HOH . D 3 HOH A 77 677 145 HOH HOH . D 3 HOH A 78 678 112 HOH HOH . D 3 HOH A 79 679 32 HOH HOH . D 3 HOH A 80 680 131 HOH HOH . D 3 HOH A 81 681 107 HOH HOH . D 3 HOH A 82 682 61 HOH HOH . D 3 HOH A 83 683 62 HOH HOH . D 3 HOH A 84 684 152 HOH HOH . D 3 HOH A 85 685 57 HOH HOH . D 3 HOH A 86 686 70 HOH HOH . D 3 HOH A 87 687 195 HOH HOH . D 3 HOH A 88 688 97 HOH HOH . D 3 HOH A 89 689 128 HOH HOH . D 3 HOH A 90 690 132 HOH HOH . D 3 HOH A 91 691 194 HOH HOH . D 3 HOH A 92 692 155 HOH HOH . D 3 HOH A 93 693 173 HOH HOH . D 3 HOH A 94 694 84 HOH HOH . D 3 HOH A 95 695 179 HOH HOH . D 3 HOH A 96 696 69 HOH HOH . D 3 HOH A 97 697 198 HOH HOH . D 3 HOH A 98 698 63 HOH HOH . D 3 HOH A 99 699 89 HOH HOH . D 3 HOH A 100 700 135 HOH HOH . D 3 HOH A 101 701 130 HOH HOH . D 3 HOH A 102 702 77 HOH HOH . D 3 HOH A 103 703 134 HOH HOH . D 3 HOH A 104 704 150 HOH HOH . D 3 HOH A 105 705 190 HOH HOH . D 3 HOH A 106 706 188 HOH HOH . E 3 HOH B 1 501 9 HOH HOH . E 3 HOH B 2 502 200 HOH HOH . E 3 HOH B 3 503 178 HOH HOH . E 3 HOH B 4 504 114 HOH HOH . E 3 HOH B 5 505 16 HOH HOH . E 3 HOH B 6 506 187 HOH HOH . E 3 HOH B 7 507 12 HOH HOH . E 3 HOH B 8 508 66 HOH HOH . E 3 HOH B 9 509 88 HOH HOH . E 3 HOH B 10 510 3 HOH HOH . E 3 HOH B 11 511 29 HOH HOH . E 3 HOH B 12 512 33 HOH HOH . E 3 HOH B 13 513 1 HOH HOH . E 3 HOH B 14 514 8 HOH HOH . E 3 HOH B 15 515 78 HOH HOH . E 3 HOH B 16 516 159 HOH HOH . E 3 HOH B 17 517 45 HOH HOH . E 3 HOH B 18 518 42 HOH HOH . E 3 HOH B 19 519 158 HOH HOH . E 3 HOH B 20 520 28 HOH HOH . E 3 HOH B 21 521 93 HOH HOH . E 3 HOH B 22 522 153 HOH HOH . E 3 HOH B 23 523 85 HOH HOH . E 3 HOH B 24 524 90 HOH HOH . E 3 HOH B 25 525 17 HOH HOH . E 3 HOH B 26 526 46 HOH HOH . E 3 HOH B 27 527 58 HOH HOH . E 3 HOH B 28 528 126 HOH HOH . E 3 HOH B 29 529 65 HOH HOH . E 3 HOH B 30 530 21 HOH HOH . E 3 HOH B 31 531 49 HOH HOH . E 3 HOH B 32 532 138 HOH HOH . E 3 HOH B 33 533 174 HOH HOH . E 3 HOH B 34 534 71 HOH HOH . E 3 HOH B 35 535 80 HOH HOH . E 3 HOH B 36 536 67 HOH HOH . E 3 HOH B 37 537 86 HOH HOH . E 3 HOH B 38 538 171 HOH HOH . E 3 HOH B 39 539 166 HOH HOH . E 3 HOH B 40 540 53 HOH HOH . E 3 HOH B 41 541 192 HOH HOH . E 3 HOH B 42 542 59 HOH HOH . E 3 HOH B 43 543 176 HOH HOH . E 3 HOH B 44 544 170 HOH HOH . E 3 HOH B 45 545 140 HOH HOH . E 3 HOH B 46 546 122 HOH HOH . E 3 HOH B 47 547 124 HOH HOH . E 3 HOH B 48 548 75 HOH HOH . E 3 HOH B 49 549 125 HOH HOH . E 3 HOH B 50 550 139 HOH HOH . E 3 HOH B 51 551 177 HOH HOH . E 3 HOH B 52 552 164 HOH HOH . E 3 HOH B 53 553 137 HOH HOH . E 3 HOH B 54 554 180 HOH HOH . E 3 HOH B 55 555 72 HOH HOH . E 3 HOH B 56 556 199 HOH HOH . E 3 HOH B 57 557 186 HOH HOH . E 3 HOH B 58 558 96 HOH HOH . E 3 HOH B 59 559 183 HOH HOH . E 3 HOH B 60 560 160 HOH HOH . E 3 HOH B 61 561 175 HOH HOH . E 3 HOH B 62 562 123 HOH HOH . E 3 HOH B 63 563 182 HOH HOH . E 3 HOH B 64 564 109 HOH HOH . E 3 HOH B 65 565 76 HOH HOH . E 3 HOH B 66 566 108 HOH HOH . E 3 HOH B 67 567 184 HOH HOH . E 3 HOH B 68 568 181 HOH HOH . E 3 HOH B 69 569 157 HOH HOH . E 3 HOH B 70 570 172 HOH HOH . E 3 HOH B 71 571 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 FT7 . . . C 2 17.231 27.332 20.399 1 100.1 ? C10 FT7 501 A 1 HETATM 2 C C15 FT7 . . . C 2 18.377 28.907 12.743 1 107.62 ? C15 FT7 501 A 1 HETATM 3 C C17 FT7 . . . C 2 16.234 28.147 13.562 1 107.46 ? C17 FT7 501 A 1 HETATM 4 C C20 FT7 . . . C 2 15.035 28.18 11.651 1 108.53 ? C20 FT7 501 A 1 HETATM 5 C C21 FT7 . . . C 2 14.946 27.892 13.011 1 107.87 ? C21 FT7 501 A 1 HETATM 6 C C22 FT7 . . . C 2 13.714 27.399 13.769 1 106.32 ? C22 FT7 501 A 1 HETATM 7 C C24 FT7 . . . C 2 16.767 28.973 10.058 1 108.83 ? C24 FT7 501 A 1 HETATM 8 C C26 FT7 . . . C 2 17.668 31.298 9.598 1 110.02 ? C26 FT7 501 A 1 HETATM 9 C C28 FT7 . . . C 2 16.214 33.175 9.214 1 111.68 ? C28 FT7 501 A 1 HETATM 10 C C01 FT7 . . . C 2 20.334 32.209 18.192 1 98.11 ? C01 FT7 501 A 1 HETATM 11 C C02 FT7 . . . C 2 20.598 32.676 19.471 1 98.85 ? C02 FT7 501 A 1 HETATM 12 C C03 FT7 . . . C 2 20.213 31.932 20.579 1 99 ? C03 FT7 501 A 1 HETATM 13 C C04 FT7 . . . C 2 19.56 30.72 20.41 1 98.69 ? C04 FT7 501 A 1 HETATM 14 C C05 FT7 . . . C 2 19.3 30.25 19.133 1 99.04 ? C05 FT7 501 A 1 HETATM 15 C C06 FT7 . . . C 2 19.683 30.996 18.026 1 98.15 ? C06 FT7 501 A 1 HETATM 16 C C07 FT7 . . . C 2 18.581 28.916 18.93 1 100.47 ? C07 FT7 501 A 1 HETATM 17 C C09 FT7 . . . C 2 17.467 28.779 19.965 1 100.39 ? C09 FT7 501 A 1 HETATM 18 C C11 FT7 . . . C 2 18.715 28.283 16.494 1 103.02 ? C11 FT7 501 A 1 HETATM 19 C C12 FT7 . . . C 2 18.113 28.372 15.089 1 104.68 ? C12 FT7 501 A 1 HETATM 20 C C14 FT7 . . . C 2 18.912 28.81 14.026 1 106.3 ? C14 FT7 501 A 1 HETATM 21 C C16 FT7 . . . C 2 17.016 28.569 12.515 1 108.3 ? C16 FT7 501 A 1 HETATM 22 C C18 FT7 . . . C 2 16.778 28.047 14.871 1 105.45 ? C18 FT7 501 A 1 HETATM 23 C C23 FT7 . . . C 2 13.884 28.047 10.653 1 108.92 ? C23 FT7 501 A 1 HETATM 24 C C25 FT7 . . . C 2 16.566 30.468 9.765 1 110.53 ? C25 FT7 501 A 1 HETATM 25 C C27 FT7 . . . C 2 17.493 32.648 9.326 1 110.36 ? C27 FT7 501 A 1 HETATM 26 C C29 FT7 . . . C 2 15.113 32.349 9.374 1 112.03 ? C29 FT7 501 A 1 HETATM 27 C C30 FT7 . . . C 2 15.29 30.999 9.646 1 112.03 ? C30 FT7 501 A 1 HETATM 28 F F31 FT7 . . . C 2 18.929 30.788 9.708 1 109.56 ? F31 FT7 501 A 1 HETATM 29 F F32 FT7 . . . C 2 16.039 34.502 8.946 1 112.14 ? F32 FT7 501 A 1 HETATM 30 N N08 FT7 . . . C 2 18.031 28.955 17.591 1 101.86 ? N08 FT7 501 A 1 HETATM 31 N N19 FT7 . . . C 2 16.269 28.585 11.377 1 108.17 ? N19 FT7 501 A 1 HETATM 32 O O13 FT7 . . . C 2 19.725 27.695 16.689 1 102.16 ? O13 FT7 501 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #