data_6D4F # _model_server_result.job_id xoHaW4wnnlrvK9g_qmaI_Q _model_server_result.datetime_utc '2025-04-21 22:50:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d4f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 6D4F # _exptl.entry_id 6D4F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6D4F _cell.length_a 61.47 _cell.length_b 73.489 _cell.length_c 75.656 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D4F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 6D4F _atom_sites.fract_transf_matrix[1][1] 0.016268 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013218 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PE A 1 801 1 1PE DRG . C 3 HOH A 1 901 181 HOH HOH . C 3 HOH A 2 902 151 HOH HOH . C 3 HOH A 3 903 86 HOH HOH . C 3 HOH A 4 904 120 HOH HOH . C 3 HOH A 5 905 62 HOH HOH . C 3 HOH A 6 906 77 HOH HOH . C 3 HOH A 7 907 158 HOH HOH . C 3 HOH A 8 908 196 HOH HOH . C 3 HOH A 9 909 16 HOH HOH . C 3 HOH A 10 910 69 HOH HOH . C 3 HOH A 11 911 10 HOH HOH . C 3 HOH A 12 912 162 HOH HOH . C 3 HOH A 13 913 1 HOH HOH . C 3 HOH A 14 914 13 HOH HOH . C 3 HOH A 15 915 159 HOH HOH . C 3 HOH A 16 916 74 HOH HOH . C 3 HOH A 17 917 76 HOH HOH . C 3 HOH A 18 918 65 HOH HOH . C 3 HOH A 19 919 2 HOH HOH . C 3 HOH A 20 920 97 HOH HOH . C 3 HOH A 21 921 47 HOH HOH . C 3 HOH A 22 922 129 HOH HOH . C 3 HOH A 23 923 54 HOH HOH . C 3 HOH A 24 924 4 HOH HOH . C 3 HOH A 25 925 42 HOH HOH . C 3 HOH A 26 926 57 HOH HOH . C 3 HOH A 27 927 28 HOH HOH . C 3 HOH A 28 928 190 HOH HOH . C 3 HOH A 29 929 71 HOH HOH . C 3 HOH A 30 930 126 HOH HOH . C 3 HOH A 31 931 38 HOH HOH . C 3 HOH A 32 932 67 HOH HOH . C 3 HOH A 33 933 63 HOH HOH . C 3 HOH A 34 934 36 HOH HOH . C 3 HOH A 35 935 149 HOH HOH . C 3 HOH A 36 936 48 HOH HOH . C 3 HOH A 37 937 108 HOH HOH . C 3 HOH A 38 938 80 HOH HOH . C 3 HOH A 39 939 156 HOH HOH . C 3 HOH A 40 940 8 HOH HOH . C 3 HOH A 41 941 11 HOH HOH . C 3 HOH A 42 942 7 HOH HOH . C 3 HOH A 43 943 96 HOH HOH . C 3 HOH A 44 944 12 HOH HOH . C 3 HOH A 45 945 145 HOH HOH . C 3 HOH A 46 946 19 HOH HOH . C 3 HOH A 47 947 150 HOH HOH . C 3 HOH A 48 948 89 HOH HOH . C 3 HOH A 49 949 20 HOH HOH . C 3 HOH A 50 950 148 HOH HOH . C 3 HOH A 51 951 32 HOH HOH . C 3 HOH A 52 952 64 HOH HOH . C 3 HOH A 53 953 82 HOH HOH . C 3 HOH A 54 954 98 HOH HOH . C 3 HOH A 55 955 49 HOH HOH . C 3 HOH A 56 956 22 HOH HOH . C 3 HOH A 57 957 99 HOH HOH . C 3 HOH A 58 958 52 HOH HOH . C 3 HOH A 59 959 23 HOH HOH . C 3 HOH A 60 960 9 HOH HOH . C 3 HOH A 61 961 61 HOH HOH . C 3 HOH A 62 962 34 HOH HOH . C 3 HOH A 63 963 26 HOH HOH . C 3 HOH A 64 964 5 HOH HOH . C 3 HOH A 65 965 66 HOH HOH . C 3 HOH A 66 966 107 HOH HOH . C 3 HOH A 67 967 25 HOH HOH . C 3 HOH A 68 968 142 HOH HOH . C 3 HOH A 69 969 3 HOH HOH . C 3 HOH A 70 970 55 HOH HOH . C 3 HOH A 71 971 174 HOH HOH . C 3 HOH A 72 972 72 HOH HOH . C 3 HOH A 73 973 17 HOH HOH . C 3 HOH A 74 974 30 HOH HOH . C 3 HOH A 75 975 121 HOH HOH . C 3 HOH A 76 976 39 HOH HOH . C 3 HOH A 77 977 70 HOH HOH . C 3 HOH A 78 978 194 HOH HOH . C 3 HOH A 79 979 180 HOH HOH . C 3 HOH A 80 980 110 HOH HOH . C 3 HOH A 81 981 44 HOH HOH . C 3 HOH A 82 982 83 HOH HOH . C 3 HOH A 83 983 187 HOH HOH . C 3 HOH A 84 984 104 HOH HOH . C 3 HOH A 85 985 37 HOH HOH . C 3 HOH A 86 986 133 HOH HOH . C 3 HOH A 87 987 116 HOH HOH . C 3 HOH A 88 988 51 HOH HOH . C 3 HOH A 89 989 123 HOH HOH . C 3 HOH A 90 990 191 HOH HOH . C 3 HOH A 91 991 186 HOH HOH . C 3 HOH A 92 992 35 HOH HOH . C 3 HOH A 93 993 105 HOH HOH . C 3 HOH A 94 994 56 HOH HOH . C 3 HOH A 95 995 138 HOH HOH . C 3 HOH A 96 996 18 HOH HOH . C 3 HOH A 97 997 58 HOH HOH . C 3 HOH A 98 998 15 HOH HOH . C 3 HOH A 99 999 14 HOH HOH . C 3 HOH A 100 1000 154 HOH HOH . C 3 HOH A 101 1001 21 HOH HOH . C 3 HOH A 102 1002 59 HOH HOH . C 3 HOH A 103 1003 50 HOH HOH . C 3 HOH A 104 1004 118 HOH HOH . C 3 HOH A 105 1005 193 HOH HOH . C 3 HOH A 106 1006 27 HOH HOH . C 3 HOH A 107 1007 60 HOH HOH . C 3 HOH A 108 1008 45 HOH HOH . C 3 HOH A 109 1009 33 HOH HOH . C 3 HOH A 110 1010 90 HOH HOH . C 3 HOH A 111 1011 88 HOH HOH . C 3 HOH A 112 1012 155 HOH HOH . C 3 HOH A 113 1013 75 HOH HOH . C 3 HOH A 114 1014 84 HOH HOH . C 3 HOH A 115 1015 115 HOH HOH . C 3 HOH A 116 1016 179 HOH HOH . C 3 HOH A 117 1017 143 HOH HOH . C 3 HOH A 118 1018 195 HOH HOH . C 3 HOH A 119 1019 29 HOH HOH . C 3 HOH A 120 1020 53 HOH HOH . C 3 HOH A 121 1021 93 HOH HOH . C 3 HOH A 122 1022 103 HOH HOH . C 3 HOH A 123 1023 102 HOH HOH . C 3 HOH A 124 1024 127 HOH HOH . C 3 HOH A 125 1025 170 HOH HOH . C 3 HOH A 126 1026 176 HOH HOH . C 3 HOH A 127 1027 132 HOH HOH . C 3 HOH A 128 1028 192 HOH HOH . C 3 HOH A 129 1029 24 HOH HOH . C 3 HOH A 130 1030 78 HOH HOH . C 3 HOH A 131 1031 81 HOH HOH . C 3 HOH A 132 1032 128 HOH HOH . C 3 HOH A 133 1033 101 HOH HOH . C 3 HOH A 134 1034 164 HOH HOH . C 3 HOH A 135 1035 139 HOH HOH . C 3 HOH A 136 1036 140 HOH HOH . C 3 HOH A 137 1037 153 HOH HOH . C 3 HOH A 138 1038 95 HOH HOH . C 3 HOH A 139 1039 87 HOH HOH . C 3 HOH A 140 1040 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . B 2 21.593 -0.041 10.068 1 57.13 ? OH2 1PE 801 A 1 HETATM 2 C C12 1PE . . . B 2 20.683 1.067 10.087 1 51.18 ? C12 1PE 801 A 1 HETATM 3 C C22 1PE . . . B 2 19.346 0.648 9.464 1 49.2 ? C22 1PE 801 A 1 HETATM 4 O OH3 1PE . . . B 2 18.795 -0.446 10.209 1 64.24 ? OH3 1PE 801 A 1 HETATM 5 C C13 1PE . . . B 2 17.385 -2.378 9.855 1 45.7 ? C13 1PE 801 A 1 HETATM 6 C C23 1PE . . . B 2 17.516 -0.854 9.705 1 46.53 ? C23 1PE 801 A 1 HETATM 7 O OH4 1PE . . . B 2 17.483 -2.755 11.221 1 47.5 ? OH4 1PE 801 A 1 HETATM 8 C C14 1PE . . . B 2 18.686 -4.849 10.734 1 41.64 ? C14 1PE 801 A 1 HETATM 9 C C24 1PE . . . B 2 17.531 -4.173 11.488 1 46.53 ? C24 1PE 801 A 1 HETATM 10 O OH5 1PE . . . B 2 18.745 -6.24 11.053 1 48.92 ? OH5 1PE 801 A 1 HETATM 11 C C15 1PE . . . B 2 19.715 -6.722 8.832 1 49.1 ? C15 1PE 801 A 1 HETATM 12 C C25 1PE . . . B 2 18.708 -7.126 9.921 1 59.44 ? C25 1PE 801 A 1 HETATM 13 O OH6 1PE . . . B 2 19.634 -7.63 7.72 1 52.13 ? OH6 1PE 801 A 1 HETATM 14 C C16 1PE . . . B 2 18.118 -9.004 6.422 1 43.36 ? C16 1PE 801 A 1 HETATM 15 C C26 1PE . . . B 2 18.261 -7.842 7.392 1 54.83 ? C26 1PE 801 A 1 HETATM 16 O OH7 1PE . . . B 2 16.729 -9.199 6.147 1 51.26 ? OH7 1PE 801 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #