data_6D6E # _model_server_result.job_id RHqG3wOEjnp_GDzL6rSIYw _model_server_result.datetime_utc '2024-11-26 17:34:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6D6E # _exptl.entry_id 6D6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 88.22 _cell.angle_beta 71.18 _cell.angle_gamma 68.69 _cell.entry_id 6D6E _cell.length_a 27.272 _cell.length_b 32.236 _cell.length_c 34.316 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 6D6E _atom_sites.fract_transf_matrix[1][1] 0.036668 _atom_sites.fract_transf_matrix[1][2] -0.014307 _atom_sites.fract_transf_matrix[1][3] -0.013964 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033299 _atom_sites.fract_transf_matrix[2][3] 0.00327 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030936 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 201 201 NO3 NO3 . C 2 NO3 A 1 202 202 NO3 NO3 . D 2 NO3 A 1 203 203 NO3 NO3 . E 2 NO3 A 1 204 204 NO3 NO3 . F 2 NO3 A 1 205 205 NO3 NO3 . G 2 NO3 A 1 206 1 NO3 NO3 . H 3 HOH A 1 301 16 HOH HOH . H 3 HOH A 2 302 1 HOH HOH . H 3 HOH A 3 303 18 HOH HOH . H 3 HOH A 4 304 2 HOH HOH . H 3 HOH A 5 305 1008 HOH HOH . H 3 HOH A 6 306 1014 HOH HOH . H 3 HOH A 7 307 1004 HOH HOH . H 3 HOH A 8 308 1036 HOH HOH . H 3 HOH A 9 309 1042 HOH HOH . H 3 HOH A 10 310 12 HOH HOH . H 3 HOH A 11 311 1058 HOH HOH . H 3 HOH A 12 312 1106 HOH HOH . H 3 HOH A 13 313 1030 HOH HOH . H 3 HOH A 14 314 1034 HOH HOH . H 3 HOH A 15 315 1006 HOH HOH . H 3 HOH A 16 316 1037 HOH HOH . H 3 HOH A 17 317 1068 HOH HOH . H 3 HOH A 18 318 1064 HOH HOH . H 3 HOH A 19 319 1010 HOH HOH . H 3 HOH A 20 320 1029 HOH HOH . H 3 HOH A 21 321 9 HOH HOH . H 3 HOH A 22 322 1016 HOH HOH . H 3 HOH A 23 323 1041 HOH HOH . H 3 HOH A 24 324 7 HOH HOH . H 3 HOH A 25 325 1027 HOH HOH . H 3 HOH A 26 326 1124 HOH HOH . H 3 HOH A 27 327 1107 HOH HOH . H 3 HOH A 28 328 1002 HOH HOH . H 3 HOH A 29 329 1076 HOH HOH . H 3 HOH A 30 330 1050 HOH HOH . H 3 HOH A 31 331 1039 HOH HOH . H 3 HOH A 32 332 1099 HOH HOH . H 3 HOH A 33 333 1045 HOH HOH . H 3 HOH A 34 334 1015 HOH HOH . H 3 HOH A 35 335 1013 HOH HOH . H 3 HOH A 36 336 1093 HOH HOH . H 3 HOH A 37 337 1061 HOH HOH . H 3 HOH A 38 338 15 HOH HOH . H 3 HOH A 39 339 1007 HOH HOH . H 3 HOH A 40 340 1116 HOH HOH . H 3 HOH A 41 341 1001 HOH HOH . H 3 HOH A 42 342 1033 HOH HOH . H 3 HOH A 43 343 1003 HOH HOH . H 3 HOH A 44 344 1009 HOH HOH . H 3 HOH A 45 345 1028 HOH HOH . H 3 HOH A 46 346 1012 HOH HOH . H 3 HOH A 47 347 1017 HOH HOH . H 3 HOH A 48 348 1020 HOH HOH . H 3 HOH A 49 349 1019 HOH HOH . H 3 HOH A 50 350 6 HOH HOH . H 3 HOH A 51 351 1018 HOH HOH . H 3 HOH A 52 352 1026 HOH HOH . H 3 HOH A 53 353 1025 HOH HOH . H 3 HOH A 54 354 1078 HOH HOH . H 3 HOH A 55 355 1005 HOH HOH . H 3 HOH A 56 356 1023 HOH HOH . H 3 HOH A 57 357 10 HOH HOH . H 3 HOH A 58 358 3 HOH HOH . H 3 HOH A 59 359 11 HOH HOH . H 3 HOH A 60 360 1054 HOH HOH . H 3 HOH A 61 361 1080 HOH HOH . H 3 HOH A 62 362 1069 HOH HOH . H 3 HOH A 63 363 1112 HOH HOH . H 3 HOH A 64 364 4 HOH HOH . H 3 HOH A 65 365 1087 HOH HOH . H 3 HOH A 66 366 1046 HOH HOH . H 3 HOH A 67 367 1032 HOH HOH . H 3 HOH A 68 368 1043 HOH HOH . H 3 HOH A 69 369 1057 HOH HOH . H 3 HOH A 70 370 1067 HOH HOH . H 3 HOH A 71 371 1082 HOH HOH . H 3 HOH A 72 372 1052 HOH HOH . H 3 HOH A 73 373 1038 HOH HOH . H 3 HOH A 74 374 1022 HOH HOH . H 3 HOH A 75 375 13 HOH HOH . H 3 HOH A 76 376 1138 HOH HOH . H 3 HOH A 77 377 5 HOH HOH . H 3 HOH A 78 378 17 HOH HOH . H 3 HOH A 79 379 1126 HOH HOH . H 3 HOH A 80 380 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . E 2 -9.355 -10.824 -13.152 0.81 28.81 ? N NO3 204 A 1 HETATM 2 O O1 NO3 . . . E 2 -8.248 -10.215 -13.156 0.81 23.44 ? O1 NO3 204 A 1 HETATM 3 O O2 NO3 . . . E 2 -9.605 -11.684 -12.258 0.81 47.96 ? O2 NO3 204 A 1 HETATM 4 O O3 NO3 . . . E 2 -10.216 -10.573 -14.043 0.81 45.85 ? O3 NO3 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #