data_6D6E
#
_model_server_result.job_id            XEx-f9SQKaYKk6UWQlDYNA 
_model_server_result.datetime_utc      '2024-11-30 02:58:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6d6e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":205}' 
#
_entry.id    6D6E 
#
_exptl.entry_id    6D6E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.22 
_cell.angle_beta          71.18 
_cell.angle_gamma         68.69 
_cell.entry_id            6D6E 
_cell.length_a            27.272 
_cell.length_b            32.236 
_cell.length_c            34.316 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6D6E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 237 n n 
N O2 NO3 sing 238 n n 
N O3 NO3 sing 239 n n 
#
_atom_sites.entry_id                     6D6E 
_atom_sites.fract_transf_matrix[1][1]    0.036668 
_atom_sites.fract_transf_matrix[1][2]    -0.014307 
_atom_sites.fract_transf_matrix[1][3]    -0.013964 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.033299 
_atom_sites.fract_transf_matrix[2][3]    0.00327 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.030936 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NO3 A 1 201 201 NO3 NO3 . 
C 2 NO3 A 1 202 202 NO3 NO3 . 
D 2 NO3 A 1 203 203 NO3 NO3 . 
E 2 NO3 A 1 204 204 NO3 NO3 . 
F 2 NO3 A 1 205 205 NO3 NO3 . 
G 2 NO3 A 1 206 1 NO3 NO3 . 
H 3 HOH A 1 301 16 HOH HOH . 
H 3 HOH A 2 302 1 HOH HOH . 
H 3 HOH A 3 303 18 HOH HOH . 
H 3 HOH A 4 304 2 HOH HOH . 
H 3 HOH A 5 305 1008 HOH HOH . 
H 3 HOH A 6 306 1014 HOH HOH . 
H 3 HOH A 7 307 1004 HOH HOH . 
H 3 HOH A 8 308 1036 HOH HOH . 
H 3 HOH A 9 309 1042 HOH HOH . 
H 3 HOH A 10 310 12 HOH HOH . 
H 3 HOH A 11 311 1058 HOH HOH . 
H 3 HOH A 12 312 1106 HOH HOH . 
H 3 HOH A 13 313 1030 HOH HOH . 
H 3 HOH A 14 314 1034 HOH HOH . 
H 3 HOH A 15 315 1006 HOH HOH . 
H 3 HOH A 16 316 1037 HOH HOH . 
H 3 HOH A 17 317 1068 HOH HOH . 
H 3 HOH A 18 318 1064 HOH HOH . 
H 3 HOH A 19 319 1010 HOH HOH . 
H 3 HOH A 20 320 1029 HOH HOH . 
H 3 HOH A 21 321 9 HOH HOH . 
H 3 HOH A 22 322 1016 HOH HOH . 
H 3 HOH A 23 323 1041 HOH HOH . 
H 3 HOH A 24 324 7 HOH HOH . 
H 3 HOH A 25 325 1027 HOH HOH . 
H 3 HOH A 26 326 1124 HOH HOH . 
H 3 HOH A 27 327 1107 HOH HOH . 
H 3 HOH A 28 328 1002 HOH HOH . 
H 3 HOH A 29 329 1076 HOH HOH . 
H 3 HOH A 30 330 1050 HOH HOH . 
H 3 HOH A 31 331 1039 HOH HOH . 
H 3 HOH A 32 332 1099 HOH HOH . 
H 3 HOH A 33 333 1045 HOH HOH . 
H 3 HOH A 34 334 1015 HOH HOH . 
H 3 HOH A 35 335 1013 HOH HOH . 
H 3 HOH A 36 336 1093 HOH HOH . 
H 3 HOH A 37 337 1061 HOH HOH . 
H 3 HOH A 38 338 15 HOH HOH . 
H 3 HOH A 39 339 1007 HOH HOH . 
H 3 HOH A 40 340 1116 HOH HOH . 
H 3 HOH A 41 341 1001 HOH HOH . 
H 3 HOH A 42 342 1033 HOH HOH . 
H 3 HOH A 43 343 1003 HOH HOH . 
H 3 HOH A 44 344 1009 HOH HOH . 
H 3 HOH A 45 345 1028 HOH HOH . 
H 3 HOH A 46 346 1012 HOH HOH . 
H 3 HOH A 47 347 1017 HOH HOH . 
H 3 HOH A 48 348 1020 HOH HOH . 
H 3 HOH A 49 349 1019 HOH HOH . 
H 3 HOH A 50 350 6 HOH HOH . 
H 3 HOH A 51 351 1018 HOH HOH . 
H 3 HOH A 52 352 1026 HOH HOH . 
H 3 HOH A 53 353 1025 HOH HOH . 
H 3 HOH A 54 354 1078 HOH HOH . 
H 3 HOH A 55 355 1005 HOH HOH . 
H 3 HOH A 56 356 1023 HOH HOH . 
H 3 HOH A 57 357 10 HOH HOH . 
H 3 HOH A 58 358 3 HOH HOH . 
H 3 HOH A 59 359 11 HOH HOH . 
H 3 HOH A 60 360 1054 HOH HOH . 
H 3 HOH A 61 361 1080 HOH HOH . 
H 3 HOH A 62 362 1069 HOH HOH . 
H 3 HOH A 63 363 1112 HOH HOH . 
H 3 HOH A 64 364 4 HOH HOH . 
H 3 HOH A 65 365 1087 HOH HOH . 
H 3 HOH A 66 366 1046 HOH HOH . 
H 3 HOH A 67 367 1032 HOH HOH . 
H 3 HOH A 68 368 1043 HOH HOH . 
H 3 HOH A 69 369 1057 HOH HOH . 
H 3 HOH A 70 370 1067 HOH HOH . 
H 3 HOH A 71 371 1082 HOH HOH . 
H 3 HOH A 72 372 1052 HOH HOH . 
H 3 HOH A 73 373 1038 HOH HOH . 
H 3 HOH A 74 374 1022 HOH HOH . 
H 3 HOH A 75 375 13 HOH HOH . 
H 3 HOH A 76 376 1138 HOH HOH . 
H 3 HOH A 77 377 5 HOH HOH . 
H 3 HOH A 78 378 17 HOH HOH . 
H 3 HOH A 79 379 1126 HOH HOH . 
H 3 HOH A 80 380 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . F 2 -5.836 -29.293 -15.678 1 31.41 ? N NO3 205 A 1 
HETATM 2 O O1 NO3 . . . F 2 -6.228 -30.481 -15.493 1 39.21 ? O1 NO3 205 A 1 
HETATM 3 O O2 NO3 . . . F 2 -6.633 -28.33 -15.484 1 36.1 ? O2 NO3 205 A 1 
HETATM 4 O O3 NO3 . . . F 2 -4.652 -29.065 -16.058 1 22.59 ? O3 NO3 205 A 1 
#
_model_server_stats.io_time_ms              104 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#