data_6D6F # _model_server_result.job_id BsAwRyrvEzRtKwsKckcSJA _model_server_result.datetime_utc '2024-11-26 22:06:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d6f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6D6F # _exptl.entry_id 6D6F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 88.23 _cell.angle_beta 71.54 _cell.angle_gamma 68.51 _cell.entry_id 6D6F _cell.length_a 26.956 _cell.length_b 31.864 _cell.length_c 33.991 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 6D6F _atom_sites.fract_transf_matrix[1][1] 0.037098 _atom_sites.fract_transf_matrix[1][2] -0.014604 _atom_sites.fract_transf_matrix[1][3] -0.013856 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033728 _atom_sites.fract_transf_matrix[2][3] 0.003266 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.03116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 201 201 NO3 NO3 . C 2 NO3 A 1 202 202 NO3 NO3 . D 2 NO3 A 1 203 203 NO3 NO3 . E 2 NO3 A 1 204 204 NO3 NO3 . F 2 NO3 A 1 205 205 NO3 NO3 . G 2 NO3 A 1 206 1 NO3 NO3 . H 2 NO3 A 1 207 2 NO3 NO3 . I 3 XYS A 1 208 1 XYS XYS . J 4 HOH A 1 301 25 HOH HOH . J 4 HOH A 2 302 1041 HOH HOH . J 4 HOH A 3 303 1039 HOH HOH . J 4 HOH A 4 304 1 HOH HOH . J 4 HOH A 5 305 1068 HOH HOH . J 4 HOH A 6 306 9 HOH HOH . J 4 HOH A 7 307 1078 HOH HOH . J 4 HOH A 8 308 24 HOH HOH . J 4 HOH A 9 309 10 HOH HOH . J 4 HOH A 10 310 18 HOH HOH . J 4 HOH A 11 311 1004 HOH HOH . J 4 HOH A 12 312 1067 HOH HOH . J 4 HOH A 13 313 1034 HOH HOH . J 4 HOH A 14 314 1014 HOH HOH . J 4 HOH A 15 315 1037 HOH HOH . J 4 HOH A 16 316 1029 HOH HOH . J 4 HOH A 17 317 1008 HOH HOH . J 4 HOH A 18 318 1139 HOH HOH . J 4 HOH A 19 319 28 HOH HOH . J 4 HOH A 20 320 1042 HOH HOH . J 4 HOH A 21 321 22 HOH HOH . J 4 HOH A 22 322 4 HOH HOH . J 4 HOH A 23 323 2 HOH HOH . J 4 HOH A 24 324 1002 HOH HOH . J 4 HOH A 25 325 1023 HOH HOH . J 4 HOH A 26 326 1027 HOH HOH . J 4 HOH A 27 327 1032 HOH HOH . J 4 HOH A 28 328 1093 HOH HOH . J 4 HOH A 29 329 1064 HOH HOH . J 4 HOH A 30 330 1013 HOH HOH . J 4 HOH A 31 331 1030 HOH HOH . J 4 HOH A 32 332 1050 HOH HOH . J 4 HOH A 33 333 1010 HOH HOH . J 4 HOH A 34 334 1087 HOH HOH . J 4 HOH A 35 335 1012 HOH HOH . J 4 HOH A 36 336 1019 HOH HOH . J 4 HOH A 37 337 1020 HOH HOH . J 4 HOH A 38 338 27 HOH HOH . J 4 HOH A 39 339 26 HOH HOH . J 4 HOH A 40 340 1028 HOH HOH . J 4 HOH A 41 341 1006 HOH HOH . J 4 HOH A 42 342 1016 HOH HOH . J 4 HOH A 43 343 1058 HOH HOH . J 4 HOH A 44 344 1003 HOH HOH . J 4 HOH A 45 345 30 HOH HOH . J 4 HOH A 46 346 5 HOH HOH . J 4 HOH A 47 347 1024 HOH HOH . J 4 HOH A 48 348 20 HOH HOH . J 4 HOH A 49 349 1007 HOH HOH . J 4 HOH A 50 350 1033 HOH HOH . J 4 HOH A 51 351 1036 HOH HOH . J 4 HOH A 52 352 1099 HOH HOH . J 4 HOH A 53 353 1124 HOH HOH . J 4 HOH A 54 354 1045 HOH HOH . J 4 HOH A 55 355 8 HOH HOH . J 4 HOH A 56 356 1009 HOH HOH . J 4 HOH A 57 357 1015 HOH HOH . J 4 HOH A 58 358 1017 HOH HOH . J 4 HOH A 59 359 17 HOH HOH . J 4 HOH A 60 360 1018 HOH HOH . J 4 HOH A 61 361 1106 HOH HOH . J 4 HOH A 62 362 1001 HOH HOH . J 4 HOH A 63 363 1061 HOH HOH . J 4 HOH A 64 364 1080 HOH HOH . J 4 HOH A 65 365 1116 HOH HOH . J 4 HOH A 66 366 1107 HOH HOH . J 4 HOH A 67 367 23 HOH HOH . J 4 HOH A 68 368 1025 HOH HOH . J 4 HOH A 69 369 1005 HOH HOH . J 4 HOH A 70 370 1054 HOH HOH . J 4 HOH A 71 371 19 HOH HOH . J 4 HOH A 72 372 3 HOH HOH . J 4 HOH A 73 373 1069 HOH HOH . J 4 HOH A 74 374 1026 HOH HOH . J 4 HOH A 75 375 15 HOH HOH . J 4 HOH A 76 376 11 HOH HOH . J 4 HOH A 77 377 12 HOH HOH . J 4 HOH A 78 378 1134 HOH HOH . J 4 HOH A 79 379 21 HOH HOH . J 4 HOH A 80 380 1076 HOH HOH . J 4 HOH A 81 381 1138 HOH HOH . J 4 HOH A 82 382 13 HOH HOH . J 4 HOH A 83 383 1046 HOH HOH . J 4 HOH A 84 384 1022 HOH HOH . J 4 HOH A 85 385 1057 HOH HOH . J 4 HOH A 86 386 1043 HOH HOH . J 4 HOH A 87 387 1131 HOH HOH . J 4 HOH A 88 388 7 HOH HOH . J 4 HOH A 89 389 16 HOH HOH . J 4 HOH A 90 390 14 HOH HOH . J 4 HOH A 91 391 6 HOH HOH . J 4 HOH A 92 392 1126 HOH HOH . J 4 HOH A 93 393 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . E 2 -9.451 -10.792 -13.522 0.82 14.84 ? N NO3 204 A 1 HETATM 2 O O1 NO3 . . . E 2 -8.299 -10.359 -13.232 0.82 9.84 ? O1 NO3 204 A 1 HETATM 3 O O2 NO3 . . . E 2 -10.141 -11.396 -12.65 0.82 28.26 ? O2 NO3 204 A 1 HETATM 4 O O3 NO3 . . . E 2 -9.91 -10.62 -14.687 0.82 38 ? O3 NO3 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #