data_6D7N # _model_server_result.job_id jLJZfDgRTJrvySBNA-XALA _model_server_result.datetime_utc '2024-10-18 12:25:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6d7n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 6D7N # _exptl.entry_id 6D7N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6D7N _cell.length_a 78.402 _cell.length_b 90.637 _cell.length_c 100.831 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D7N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6D7N _atom_sites.fract_transf_matrix[1][1] 0.012755 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 601 1 EDO EDO . C 2 EDO B 1 602 2 EDO EDO . D 2 EDO B 1 603 3 EDO EDO . E 2 EDO B 1 604 5 EDO EDO . F 2 EDO B 1 605 6 EDO EDO . G 3 HOH B 1 701 107 HOH HOH . G 3 HOH B 2 702 153 HOH HOH . G 3 HOH B 3 703 41 HOH HOH . G 3 HOH B 4 704 90 HOH HOH . G 3 HOH B 5 705 48 HOH HOH . G 3 HOH B 6 706 35 HOH HOH . G 3 HOH B 7 707 5 HOH HOH . G 3 HOH B 8 708 175 HOH HOH . G 3 HOH B 9 709 11 HOH HOH . G 3 HOH B 10 710 64 HOH HOH . G 3 HOH B 11 711 106 HOH HOH . G 3 HOH B 12 712 52 HOH HOH . G 3 HOH B 13 713 87 HOH HOH . G 3 HOH B 14 714 9 HOH HOH . G 3 HOH B 15 715 7 HOH HOH . G 3 HOH B 16 716 92 HOH HOH . G 3 HOH B 17 717 30 HOH HOH . G 3 HOH B 18 718 214 HOH HOH . G 3 HOH B 19 719 21 HOH HOH . G 3 HOH B 20 720 180 HOH HOH . G 3 HOH B 21 721 27 HOH HOH . G 3 HOH B 22 722 1 HOH HOH . G 3 HOH B 23 723 33 HOH HOH . G 3 HOH B 24 724 145 HOH HOH . G 3 HOH B 25 725 215 HOH HOH . G 3 HOH B 26 726 108 HOH HOH . G 3 HOH B 27 727 3 HOH HOH . G 3 HOH B 28 728 43 HOH HOH . G 3 HOH B 29 729 12 HOH HOH . G 3 HOH B 30 730 13 HOH HOH . G 3 HOH B 31 731 15 HOH HOH . G 3 HOH B 32 732 213 HOH HOH . G 3 HOH B 33 733 6 HOH HOH . G 3 HOH B 34 734 226 HOH HOH . G 3 HOH B 35 735 28 HOH HOH . G 3 HOH B 36 736 38 HOH HOH . G 3 HOH B 37 737 25 HOH HOH . G 3 HOH B 38 738 160 HOH HOH . G 3 HOH B 39 739 132 HOH HOH . G 3 HOH B 40 740 47 HOH HOH . G 3 HOH B 41 741 16 HOH HOH . G 3 HOH B 42 742 97 HOH HOH . G 3 HOH B 43 743 171 HOH HOH . G 3 HOH B 44 744 8 HOH HOH . G 3 HOH B 45 745 102 HOH HOH . G 3 HOH B 46 746 178 HOH HOH . G 3 HOH B 47 747 96 HOH HOH . G 3 HOH B 48 748 60 HOH HOH . G 3 HOH B 49 749 31 HOH HOH . G 3 HOH B 50 750 131 HOH HOH . G 3 HOH B 51 751 45 HOH HOH . G 3 HOH B 52 752 2 HOH HOH . G 3 HOH B 53 753 26 HOH HOH . G 3 HOH B 54 754 14 HOH HOH . G 3 HOH B 55 755 187 HOH HOH . G 3 HOH B 56 756 176 HOH HOH . G 3 HOH B 57 757 93 HOH HOH . G 3 HOH B 58 758 19 HOH HOH . G 3 HOH B 59 759 63 HOH HOH . G 3 HOH B 60 760 119 HOH HOH . G 3 HOH B 61 761 116 HOH HOH . G 3 HOH B 62 762 174 HOH HOH . G 3 HOH B 63 763 56 HOH HOH . G 3 HOH B 64 764 86 HOH HOH . G 3 HOH B 65 765 49 HOH HOH . G 3 HOH B 66 766 81 HOH HOH . G 3 HOH B 67 767 158 HOH HOH . G 3 HOH B 68 768 196 HOH HOH . G 3 HOH B 69 769 122 HOH HOH . G 3 HOH B 70 770 85 HOH HOH . G 3 HOH B 71 771 59 HOH HOH . G 3 HOH B 72 772 80 HOH HOH . G 3 HOH B 73 773 82 HOH HOH . G 3 HOH B 74 774 58 HOH HOH . G 3 HOH B 75 775 205 HOH HOH . G 3 HOH B 76 776 32 HOH HOH . G 3 HOH B 77 777 74 HOH HOH . G 3 HOH B 78 778 34 HOH HOH . G 3 HOH B 79 779 20 HOH HOH . G 3 HOH B 80 780 109 HOH HOH . G 3 HOH B 81 781 125 HOH HOH . G 3 HOH B 82 782 4 HOH HOH . G 3 HOH B 83 783 44 HOH HOH . G 3 HOH B 84 784 219 HOH HOH . G 3 HOH B 85 785 72 HOH HOH . G 3 HOH B 86 786 127 HOH HOH . G 3 HOH B 87 787 95 HOH HOH . G 3 HOH B 88 788 99 HOH HOH . G 3 HOH B 89 789 195 HOH HOH . G 3 HOH B 90 790 18 HOH HOH . G 3 HOH B 91 791 79 HOH HOH . G 3 HOH B 92 792 50 HOH HOH . G 3 HOH B 93 793 37 HOH HOH . G 3 HOH B 94 794 70 HOH HOH . G 3 HOH B 95 795 66 HOH HOH . G 3 HOH B 96 796 114 HOH HOH . G 3 HOH B 97 797 10 HOH HOH . G 3 HOH B 98 798 150 HOH HOH . G 3 HOH B 99 799 206 HOH HOH . G 3 HOH B 100 800 17 HOH HOH . G 3 HOH B 101 801 36 HOH HOH . G 3 HOH B 102 802 61 HOH HOH . G 3 HOH B 103 803 110 HOH HOH . G 3 HOH B 104 804 105 HOH HOH . G 3 HOH B 105 805 54 HOH HOH . G 3 HOH B 106 806 197 HOH HOH . G 3 HOH B 107 807 55 HOH HOH . G 3 HOH B 108 808 53 HOH HOH . G 3 HOH B 109 809 149 HOH HOH . G 3 HOH B 110 810 136 HOH HOH . G 3 HOH B 111 811 121 HOH HOH . G 3 HOH B 112 812 42 HOH HOH . G 3 HOH B 113 813 51 HOH HOH . G 3 HOH B 114 814 146 HOH HOH . G 3 HOH B 115 815 83 HOH HOH . G 3 HOH B 116 816 62 HOH HOH . G 3 HOH B 117 817 78 HOH HOH . G 3 HOH B 118 818 162 HOH HOH . G 3 HOH B 119 819 208 HOH HOH . G 3 HOH B 120 820 73 HOH HOH . G 3 HOH B 121 821 222 HOH HOH . G 3 HOH B 122 822 200 HOH HOH . G 3 HOH B 123 823 128 HOH HOH . G 3 HOH B 124 824 172 HOH HOH . G 3 HOH B 125 825 173 HOH HOH . G 3 HOH B 126 826 22 HOH HOH . G 3 HOH B 127 827 183 HOH HOH . G 3 HOH B 128 828 65 HOH HOH . G 3 HOH B 129 829 203 HOH HOH . G 3 HOH B 130 830 23 HOH HOH . G 3 HOH B 131 831 98 HOH HOH . G 3 HOH B 132 832 46 HOH HOH . G 3 HOH B 133 833 112 HOH HOH . G 3 HOH B 134 834 111 HOH HOH . G 3 HOH B 135 835 202 HOH HOH . G 3 HOH B 136 836 177 HOH HOH . G 3 HOH B 137 837 24 HOH HOH . G 3 HOH B 138 838 151 HOH HOH . G 3 HOH B 139 839 170 HOH HOH . G 3 HOH B 140 840 71 HOH HOH . G 3 HOH B 141 841 185 HOH HOH . G 3 HOH B 142 842 169 HOH HOH . G 3 HOH B 143 843 188 HOH HOH . G 3 HOH B 144 844 211 HOH HOH . G 3 HOH B 145 845 225 HOH HOH . G 3 HOH B 146 846 212 HOH HOH . G 3 HOH B 147 847 198 HOH HOH . G 3 HOH B 148 848 217 HOH HOH . G 3 HOH B 149 849 140 HOH HOH . G 3 HOH B 150 850 120 HOH HOH . G 3 HOH B 151 851 221 HOH HOH . G 3 HOH B 152 852 167 HOH HOH . G 3 HOH B 153 853 148 HOH HOH . G 3 HOH B 154 854 39 HOH HOH . G 3 HOH B 155 855 166 HOH HOH . G 3 HOH B 156 856 209 HOH HOH . G 3 HOH B 157 857 75 HOH HOH . G 3 HOH B 158 858 143 HOH HOH . G 3 HOH B 159 859 218 HOH HOH . G 3 HOH B 160 860 201 HOH HOH . G 3 HOH B 161 861 163 HOH HOH . G 3 HOH B 162 862 220 HOH HOH . G 3 HOH B 163 863 199 HOH HOH . G 3 HOH B 164 864 141 HOH HOH . G 3 HOH B 165 865 207 HOH HOH . G 3 HOH B 166 866 130 HOH HOH . G 3 HOH B 167 867 124 HOH HOH . G 3 HOH B 168 868 210 HOH HOH . G 3 HOH B 169 869 69 HOH HOH . G 3 HOH B 170 870 91 HOH HOH . G 3 HOH B 171 871 189 HOH HOH . G 3 HOH B 172 872 40 HOH HOH . G 3 HOH B 173 873 103 HOH HOH . G 3 HOH B 174 874 216 HOH HOH . G 3 HOH B 175 875 76 HOH HOH . G 3 HOH B 176 876 192 HOH HOH . G 3 HOH B 177 877 126 HOH HOH . G 3 HOH B 178 878 133 HOH HOH . G 3 HOH B 179 879 100 HOH HOH . G 3 HOH B 180 880 129 HOH HOH . G 3 HOH B 181 881 161 HOH HOH . G 3 HOH B 182 882 123 HOH HOH . G 3 HOH B 183 883 57 HOH HOH . G 3 HOH B 184 884 224 HOH HOH . G 3 HOH B 185 885 104 HOH HOH . G 3 HOH B 186 886 182 HOH HOH . G 3 HOH B 187 887 115 HOH HOH . G 3 HOH B 188 888 117 HOH HOH . G 3 HOH B 189 889 223 HOH HOH . G 3 HOH B 190 890 77 HOH HOH . G 3 HOH B 191 891 101 HOH HOH . G 3 HOH B 192 892 159 HOH HOH . G 3 HOH B 193 893 204 HOH HOH . G 3 HOH B 194 894 67 HOH HOH . G 3 HOH B 195 895 89 HOH HOH . G 3 HOH B 196 896 186 HOH HOH . G 3 HOH B 197 897 118 HOH HOH . G 3 HOH B 198 898 181 HOH HOH . G 3 HOH B 199 899 137 HOH HOH . G 3 HOH B 200 900 113 HOH HOH . G 3 HOH B 201 901 84 HOH HOH . G 3 HOH B 202 902 68 HOH HOH . G 3 HOH B 203 903 139 HOH HOH . G 3 HOH B 204 904 157 HOH HOH . G 3 HOH B 205 905 29 HOH HOH . G 3 HOH B 206 906 135 HOH HOH . G 3 HOH B 207 907 94 HOH HOH . G 3 HOH B 208 908 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 12.71 -16.836 -20.569 1 70.18 ? C1 EDO 604 B 1 HETATM 2 O O1 EDO . . . E 2 11.302 -17.195 -20.64 1 52.01 ? O1 EDO 604 B 1 HETATM 3 C C2 EDO . . . E 2 13.643 -18.064 -20.546 1 54.02 ? C2 EDO 604 B 1 HETATM 4 O O2 EDO . . . E 2 13.557 -18.847 -21.776 1 59.55 ? O2 EDO 604 B 1 HETATM 5 H H11 EDO . . . E 2 12.963 -16.212 -21.429 1 84.22 ? H11 EDO 604 B 1 HETATM 6 H H12 EDO . . . E 2 12.881 -16.241 -19.67 1 84.22 ? H12 EDO 604 B 1 HETATM 7 H HO1 EDO . . . E 2 10.765 -16.391 -20.652 1 62.41 ? HO1 EDO 604 B 1 HETATM 8 H H21 EDO . . . E 2 14.673 -17.73 -20.404 1 64.82 ? H21 EDO 604 B 1 HETATM 9 H H22 EDO . . . E 2 13.381 -18.699 -19.697 1 64.82 ? H22 EDO 604 B 1 HETATM 10 H HO2 EDO . . . E 2 14.156 -19.604 -21.719 1 71.46 ? HO2 EDO 604 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #