data_6D87
#
_model_server_result.job_id            iBgTg9-FfDcb5C_ozifmUg 
_model_server_result.datetime_utc      '2025-07-30 20:40:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6d87 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    6D87 
#
_exptl.entry_id    6D87 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6D87 
_cell.length_a            85.499 
_cell.length_b            91.637 
_cell.length_c            93.574 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6D87 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLU 36 B GLU 145 1_555 A N CSO 37 B CSO 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C CSO 37 B CSO 146 1_555 A N SER 38 B SER 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 B C GLU 36 A GLU 145 1_555 B N CSO 37 A CSO 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 B C CSO 37 A CSO 146 1_555 B N SER 38 A SER 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 304 n n 
S O2 SO4 doub 305 n n 
S O3 SO4 sing 306 n n 
S O4 SO4 sing 307 n n 
#
_atom_sites.entry_id                     6D87 
_atom_sites.fract_transf_matrix[1][1]    0.011696 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010913 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010687 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 B 1 401 1 SO4 SO4 . 
D 2 SO4 B 1 402 3 SO4 SO4 . 
E 2 SO4 A 1 401 4 SO4 SO4 . 
F 3 HOH B 1 501 195 HOH HOH . 
F 3 HOH B 2 502 188 HOH HOH . 
F 3 HOH B 3 503 183 HOH HOH . 
F 3 HOH B 4 504 154 HOH HOH . 
F 3 HOH B 5 505 16 HOH HOH . 
F 3 HOH B 6 506 184 HOH HOH . 
F 3 HOH B 7 507 121 HOH HOH . 
F 3 HOH B 8 508 34 HOH HOH . 
F 3 HOH B 9 509 189 HOH HOH . 
F 3 HOH B 10 510 185 HOH HOH . 
F 3 HOH B 11 511 217 HOH HOH . 
F 3 HOH B 12 512 216 HOH HOH . 
F 3 HOH B 13 513 9 HOH HOH . 
F 3 HOH B 14 514 156 HOH HOH . 
F 3 HOH B 15 515 10 HOH HOH . 
F 3 HOH B 16 516 198 HOH HOH . 
F 3 HOH B 17 517 187 HOH HOH . 
F 3 HOH B 18 518 207 HOH HOH . 
F 3 HOH B 19 519 17 HOH HOH . 
F 3 HOH B 20 520 215 HOH HOH . 
F 3 HOH B 21 521 126 HOH HOH . 
F 3 HOH B 22 522 197 HOH HOH . 
F 3 HOH B 23 523 168 HOH HOH . 
F 3 HOH B 24 524 33 HOH HOH . 
F 3 HOH B 25 525 192 HOH HOH . 
F 3 HOH B 26 526 211 HOH HOH . 
F 3 HOH B 27 527 111 HOH HOH . 
F 3 HOH B 28 528 167 HOH HOH . 
F 3 HOH B 29 529 193 HOH HOH . 
F 3 HOH B 30 530 186 HOH HOH . 
F 3 HOH B 31 531 175 HOH HOH . 
F 3 HOH B 32 532 117 HOH HOH . 
F 3 HOH B 33 533 45 HOH HOH . 
F 3 HOH B 34 534 161 HOH HOH . 
F 3 HOH B 35 535 213 HOH HOH . 
F 3 HOH B 36 536 208 HOH HOH . 
F 3 HOH B 37 537 163 HOH HOH . 
F 3 HOH B 38 538 196 HOH HOH . 
F 3 HOH B 39 539 109 HOH HOH . 
F 3 HOH B 40 540 162 HOH HOH . 
F 3 HOH B 41 541 90 HOH HOH . 
F 3 HOH B 42 542 137 HOH HOH . 
F 3 HOH B 43 543 209 HOH HOH . 
F 3 HOH B 44 544 169 HOH HOH . 
F 3 HOH B 45 545 194 HOH HOH . 
G 3 HOH A 1 501 180 HOH HOH . 
G 3 HOH A 2 502 51 HOH HOH . 
G 3 HOH A 3 503 176 HOH HOH . 
G 3 HOH A 4 504 205 HOH HOH . 
G 3 HOH A 5 505 61 HOH HOH . 
G 3 HOH A 6 506 179 HOH HOH . 
G 3 HOH A 7 507 202 HOH HOH . 
G 3 HOH A 8 508 190 HOH HOH . 
G 3 HOH A 9 509 131 HOH HOH . 
G 3 HOH A 10 510 173 HOH HOH . 
G 3 HOH A 11 511 178 HOH HOH . 
G 3 HOH A 12 512 146 HOH HOH . 
G 3 HOH A 13 513 206 HOH HOH . 
G 3 HOH A 14 514 182 HOH HOH . 
G 3 HOH A 15 515 218 HOH HOH . 
G 3 HOH A 16 516 130 HOH HOH . 
G 3 HOH A 17 517 60 HOH HOH . 
G 3 HOH A 18 518 177 HOH HOH . 
G 3 HOH A 19 519 204 HOH HOH . 
G 3 HOH A 20 520 105 HOH HOH . 
G 3 HOH A 21 521 125 HOH HOH . 
G 3 HOH A 22 522 64 HOH HOH . 
G 3 HOH A 23 523 181 HOH HOH . 
G 3 HOH A 24 524 174 HOH HOH . 
G 3 HOH A 25 525 124 HOH HOH . 
G 3 HOH A 26 526 214 HOH HOH . 
G 3 HOH A 27 527 1 HOH HOH . 
G 3 HOH A 28 528 203 HOH HOH . 
G 3 HOH A 29 529 122 HOH HOH . 
G 3 HOH A 30 530 201 HOH HOH . 
G 3 HOH A 31 531 200 HOH HOH . 
G 3 HOH A 32 532 164 HOH HOH . 
G 3 HOH A 33 533 220 HOH HOH . 
G 3 HOH A 34 534 159 HOH HOH . 
G 3 HOH A 35 535 221 HOH HOH . 
G 3 HOH A 36 536 191 HOH HOH . 
G 3 HOH A 37 537 171 HOH HOH . 
G 3 HOH A 38 538 172 HOH HOH . 
G 3 HOH A 39 539 219 HOH HOH . 
G 3 HOH A 40 540 166 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . E 2 -1.235 4.283 -6.058 1 104.96 ? S SO4 401 A 1 
HETATM 2 O O1 SO4 . . . E 2 -0.796 5.096 -7.191 1 85.82 ? O1 SO4 401 A 1 
HETATM 3 O O2 SO4 . . . E 2 -2.166 3.258 -6.522 1 74.27 ? O2 SO4 401 A 1 
HETATM 4 O O3 SO4 . . . E 2 -0.074 3.659 -5.427 1 69.45 ? O3 SO4 401 A 1 
HETATM 5 O O4 SO4 . . . E 2 -1.911 5.128 -5.081 1 154.06 ? O4 SO4 401 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           358 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#