data_6DA1 # _model_server_result.job_id OpiPInBq4SeSPhZJ3yFFkQ _model_server_result.datetime_utc '2025-03-31 22:21:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6da1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 6DA1 # _exptl.entry_id 6DA1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6DA1 _cell.length_a 75.33 _cell.length_b 75.33 _cell.length_c 115.331 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DA1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C PRO 1 C PRO 281 1_555 C N SEP 2 C SEP 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 C C SEP 2 C SEP 282 1_555 C N PF5 3 C PF5 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 C C PF5 3 C PF5 283 1_555 C N ASP 4 C ASP 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 C C ASP 4 C ASP 284 1_555 C N SEP 5 C SEP 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 C C SEP 5 C SEP 285 1_555 C N PF5 6 C PF5 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 C C PF5 6 C PF5 286 1_555 C N ASP 7 C ASP 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 C C ASP 7 C ASP 287 1_555 C N PF5 8 C PF5 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 C C PF5 8 C PF5 288 1_555 C N GLU 9 C GLU 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 C C ASP 10 C ASP 290 1_555 C N PF5 11 C PF5 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 C C PF5 11 C PF5 291 1_555 C N PRO 12 C PRO 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale11 C C TRP 16 C TRP 296 1_555 C N NH2 17 C NH2 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 333 n n S O2 SO4 doub 334 n n S O3 SO4 sing 335 n n S O4 SO4 sing 336 n n # _atom_sites.entry_id 6DA1 _atom_sites.fract_transf_matrix[1][1] 0.013275 _atom_sites.fract_transf_matrix[1][2] 0.007664 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015329 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008671 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SO4 A 1 501 164 SO4 SO4 . E 3 SO4 B 1 501 162 SO4 SO4 . F 3 SO4 B 1 502 163 SO4 SO4 . G 4 HOH A 1 601 148 HOH HOH . G 4 HOH A 2 602 134 HOH HOH . G 4 HOH A 3 603 123 HOH HOH . G 4 HOH A 4 604 16 HOH HOH . G 4 HOH A 5 605 14 HOH HOH . G 4 HOH A 6 606 32 HOH HOH . G 4 HOH A 7 607 5 HOH HOH . G 4 HOH A 8 608 136 HOH HOH . G 4 HOH A 9 609 73 HOH HOH . G 4 HOH A 10 610 53 HOH HOH . G 4 HOH A 11 611 9 HOH HOH . G 4 HOH A 12 612 51 HOH HOH . G 4 HOH A 13 613 146 HOH HOH . G 4 HOH A 14 614 13 HOH HOH . G 4 HOH A 15 615 147 HOH HOH . G 4 HOH A 16 616 104 HOH HOH . G 4 HOH A 17 617 18 HOH HOH . G 4 HOH A 18 618 65 HOH HOH . G 4 HOH A 19 619 139 HOH HOH . G 4 HOH A 20 620 54 HOH HOH . G 4 HOH A 21 621 84 HOH HOH . G 4 HOH A 22 622 151 HOH HOH . G 4 HOH A 23 623 70 HOH HOH . G 4 HOH A 24 624 94 HOH HOH . G 4 HOH A 25 625 59 HOH HOH . G 4 HOH A 26 626 106 HOH HOH . G 4 HOH A 27 627 44 HOH HOH . G 4 HOH A 28 628 92 HOH HOH . G 4 HOH A 29 629 159 HOH HOH . G 4 HOH A 30 630 79 HOH HOH . G 4 HOH A 31 631 122 HOH HOH . G 4 HOH A 32 632 1 HOH HOH . G 4 HOH A 33 633 141 HOH HOH . G 4 HOH A 34 634 105 HOH HOH . G 4 HOH A 35 635 124 HOH HOH . G 4 HOH A 36 636 62 HOH HOH . G 4 HOH A 37 637 97 HOH HOH . G 4 HOH A 38 638 90 HOH HOH . G 4 HOH A 39 639 115 HOH HOH . G 4 HOH A 40 640 60 HOH HOH . G 4 HOH A 41 641 142 HOH HOH . G 4 HOH A 42 642 154 HOH HOH . G 4 HOH A 43 643 161 HOH HOH . G 4 HOH A 44 644 135 HOH HOH . G 4 HOH A 45 645 133 HOH HOH . G 4 HOH A 46 646 19 HOH HOH . G 4 HOH A 47 647 10 HOH HOH . G 4 HOH A 48 648 156 HOH HOH . G 4 HOH A 49 649 82 HOH HOH . G 4 HOH A 50 650 155 HOH HOH . G 4 HOH A 51 651 64 HOH HOH . G 4 HOH A 52 652 83 HOH HOH . G 4 HOH A 53 653 150 HOH HOH . G 4 HOH A 54 654 129 HOH HOH . G 4 HOH A 55 655 128 HOH HOH . H 4 HOH B 1 601 88 HOH HOH . H 4 HOH B 2 602 107 HOH HOH . H 4 HOH B 3 603 145 HOH HOH . H 4 HOH B 4 604 24 HOH HOH . H 4 HOH B 5 605 28 HOH HOH . H 4 HOH B 6 606 117 HOH HOH . H 4 HOH B 7 607 39 HOH HOH . H 4 HOH B 8 608 113 HOH HOH . H 4 HOH B 9 609 86 HOH HOH . H 4 HOH B 10 610 29 HOH HOH . H 4 HOH B 11 611 55 HOH HOH . H 4 HOH B 12 612 46 HOH HOH . H 4 HOH B 13 613 96 HOH HOH . H 4 HOH B 14 614 144 HOH HOH . H 4 HOH B 15 615 34 HOH HOH . H 4 HOH B 16 616 131 HOH HOH . H 4 HOH B 17 617 35 HOH HOH . H 4 HOH B 18 618 74 HOH HOH . H 4 HOH B 19 619 68 HOH HOH . H 4 HOH B 20 620 138 HOH HOH . H 4 HOH B 21 621 93 HOH HOH . H 4 HOH B 22 622 22 HOH HOH . H 4 HOH B 23 623 103 HOH HOH . H 4 HOH B 24 624 23 HOH HOH . H 4 HOH B 25 625 20 HOH HOH . H 4 HOH B 26 626 42 HOH HOH . H 4 HOH B 27 627 30 HOH HOH . H 4 HOH B 28 628 40 HOH HOH . H 4 HOH B 29 629 27 HOH HOH . H 4 HOH B 30 630 119 HOH HOH . H 4 HOH B 31 631 75 HOH HOH . H 4 HOH B 32 632 26 HOH HOH . H 4 HOH B 33 633 85 HOH HOH . H 4 HOH B 34 634 58 HOH HOH . H 4 HOH B 35 635 6 HOH HOH . H 4 HOH B 36 636 78 HOH HOH . H 4 HOH B 37 637 8 HOH HOH . H 4 HOH B 38 638 2 HOH HOH . H 4 HOH B 39 639 132 HOH HOH . H 4 HOH B 40 640 36 HOH HOH . H 4 HOH B 41 641 4 HOH HOH . H 4 HOH B 42 642 126 HOH HOH . H 4 HOH B 43 643 45 HOH HOH . H 4 HOH B 44 644 31 HOH HOH . H 4 HOH B 45 645 112 HOH HOH . H 4 HOH B 46 646 38 HOH HOH . H 4 HOH B 47 647 157 HOH HOH . H 4 HOH B 48 648 87 HOH HOH . H 4 HOH B 49 649 67 HOH HOH . H 4 HOH B 50 650 72 HOH HOH . H 4 HOH B 51 651 160 HOH HOH . H 4 HOH B 52 652 98 HOH HOH . H 4 HOH B 53 653 71 HOH HOH . H 4 HOH B 54 654 33 HOH HOH . H 4 HOH B 55 655 99 HOH HOH . H 4 HOH B 56 656 140 HOH HOH . H 4 HOH B 57 657 52 HOH HOH . H 4 HOH B 58 658 91 HOH HOH . H 4 HOH B 59 659 11 HOH HOH . H 4 HOH B 60 660 127 HOH HOH . H 4 HOH B 61 661 121 HOH HOH . H 4 HOH B 62 662 120 HOH HOH . H 4 HOH B 63 663 109 HOH HOH . H 4 HOH B 64 664 80 HOH HOH . H 4 HOH B 65 665 108 HOH HOH . H 4 HOH B 66 666 25 HOH HOH . H 4 HOH B 67 667 158 HOH HOH . H 4 HOH B 68 668 76 HOH HOH . H 4 HOH B 69 669 66 HOH HOH . H 4 HOH B 70 670 143 HOH HOH . H 4 HOH B 71 671 152 HOH HOH . H 4 HOH B 72 672 116 HOH HOH . H 4 HOH B 73 673 17 HOH HOH . H 4 HOH B 74 674 69 HOH HOH . H 4 HOH B 75 675 149 HOH HOH . H 4 HOH B 76 676 130 HOH HOH . H 4 HOH B 77 677 81 HOH HOH . H 4 HOH B 78 678 100 HOH HOH . H 4 HOH B 79 679 137 HOH HOH . H 4 HOH B 80 680 114 HOH HOH . H 4 HOH B 81 681 48 HOH HOH . H 4 HOH B 82 682 63 HOH HOH . H 4 HOH B 83 683 102 HOH HOH . H 4 HOH B 84 684 101 HOH HOH . H 4 HOH B 85 685 49 HOH HOH . H 4 HOH B 86 686 41 HOH HOH . H 4 HOH B 87 687 153 HOH HOH . H 4 HOH B 88 688 21 HOH HOH . I 4 HOH C 1 301 7 HOH HOH . I 4 HOH C 2 302 3 HOH HOH . I 4 HOH C 3 303 47 HOH HOH . I 4 HOH C 4 304 95 HOH HOH . I 4 HOH C 5 305 50 HOH HOH . I 4 HOH C 6 306 57 HOH HOH . I 4 HOH C 7 307 111 HOH HOH . I 4 HOH C 8 308 43 HOH HOH . I 4 HOH C 9 309 89 HOH HOH . I 4 HOH C 10 310 77 HOH HOH . I 4 HOH C 11 311 12 HOH HOH . I 4 HOH C 12 312 37 HOH HOH . I 4 HOH C 13 313 61 HOH HOH . I 4 HOH C 14 314 118 HOH HOH . I 4 HOH C 15 315 56 HOH HOH . I 4 HOH C 16 316 15 HOH HOH . I 4 HOH C 17 317 125 HOH HOH . I 4 HOH C 18 318 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 37.921 24.205 30.825 1 93 ? S SO4 502 B 1 HETATM 2 O O1 SO4 . . . F 3 38.917 23.583 29.95 1 92.19 ? O1 SO4 502 B 1 HETATM 3 O O2 SO4 . . . F 3 37.826 25.635 30.524 1 88.27 ? O2 SO4 502 B 1 HETATM 4 O O3 SO4 . . . F 3 38.325 24.03 32.221 1 91.06 ? O3 SO4 502 B 1 HETATM 5 O O4 SO4 . . . F 3 36.618 23.574 30.609 1 88.1 ? O4 SO4 502 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #