data_6DB1 # _model_server_result.job_id NxbIZfUDxiA8Ejs4iUy3pQ _model_server_result.datetime_utc '2024-12-26 17:27:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6db1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6DB1 # _exptl.entry_id 6DB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6DB1 _cell.length_a 89.226 _cell.length_b 89.226 _cell.length_c 65.89 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 20 A GLN 51 1_555 A N MSE 21 A MSE 52 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C GLN 20 A GLN 51 1_555 A N MSE 21 A MSE 52 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C MSE 21 A MSE 52 1_555 A N THR 22 A THR 53 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C MSE 21 A MSE 52 1_555 A N THR 22 A THR 53 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C ALA 41 A ALA 72 1_555 A N MSE 42 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 A C MSE 42 A MSE 73 1_555 A N ASP 43 A ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 A C ASN 62 A ASN 93 1_555 A N MSE 63 A MSE 94 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.335 ? covale ? covale8 A C ASN 62 A ASN 93 1_555 A N MSE 63 A MSE 94 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.333 ? covale ? covale9 A C MSE 63 A MSE 94 1_555 A N ARG 64 A ARG 95 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 A C MSE 63 A MSE 94 1_555 A N ARG 64 A ARG 95 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 A C GLU 69 A GLU 100 1_555 A N MSE 70 A MSE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale12 A C MSE 70 A MSE 101 1_555 A N LYS 71 A LYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale13 A C PRO 77 A PRO 108 1_555 A N MSE 78 A MSE 109 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.332 ? covale ? covale14 A C PRO 77 A PRO 108 1_555 A N MSE 78 A MSE 109 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.319 ? covale ? covale15 A C MSE 78 A MSE 109 1_555 A N ASN 79 A ASN 110 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale16 A C MSE 78 A MSE 109 1_555 A N ASN 79 A ASN 110 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale17 A C GLN 101 A GLN 132 1_555 A N MSE 102 A MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale18 A C MSE 102 A MSE 133 1_555 A N GLN 103 A GLN 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale19 A C ALA 141 A ALA 172 1_555 A N MSE 142 A MSE 173 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.339 ? covale ? covale20 A C ALA 141 A ALA 172 1_555 A N MSE 142 A MSE 173 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.331 ? covale ? covale21 A C MSE 142 A MSE 173 1_555 A N LEU 143 A LEU 174 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale22 A C MSE 142 A MSE 173 1_555 A N LEU 143 A LEU 174 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 B C GLN 20 B GLN 51 1_555 B N MSE 21 B MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale24 B C MSE 21 B MSE 52 1_555 B N THR 22 B THR 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale25 B C ALA 41 B ALA 72 1_555 B N MSE 42 B MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale26 B C MSE 42 B MSE 73 1_555 B N ASP 43 B ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale27 B C ASN 62 B ASN 93 1_555 B N MSE 63 B MSE 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale28 B C MSE 63 B MSE 94 1_555 B N ARG 64 B ARG 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale29 B C GLU 69 B GLU 100 1_555 B N MSE 70 B MSE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale30 B C MSE 70 B MSE 101 1_555 B N LYS 71 B LYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale31 B C PRO 77 B PRO 108 1_555 B N MSE 78 B MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale32 B C MSE 78 B MSE 109 1_555 B N ASN 79 B ASN 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale33 B C GLN 101 B GLN 132 1_555 B N MSE 102 B MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale34 B C MSE 102 B MSE 133 1_555 B N GLN 103 B GLN 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale35 B C ALA 141 B ALA 172 1_555 B N MSE 142 B MSE 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale36 B C MSE 142 B MSE 173 1_555 B N LEU 143 B LEU 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6DB1 _atom_sites.fract_transf_matrix[1][1] 0.011207 _atom_sites.fract_transf_matrix[1][2] 0.006471 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL B 1 201 1 CL CL . D 3 HOH A 1 201 21 HOH HOH . D 3 HOH A 2 202 71 HOH HOH . D 3 HOH A 3 203 83 HOH HOH . D 3 HOH A 4 204 22 HOH HOH . D 3 HOH A 5 205 70 HOH HOH . D 3 HOH A 6 206 63 HOH HOH . D 3 HOH A 7 207 73 HOH HOH . D 3 HOH A 8 208 24 HOH HOH . D 3 HOH A 9 209 69 HOH HOH . D 3 HOH A 10 210 32 HOH HOH . D 3 HOH A 11 211 9 HOH HOH . D 3 HOH A 12 212 50 HOH HOH . D 3 HOH A 13 213 45 HOH HOH . D 3 HOH A 14 214 51 HOH HOH . D 3 HOH A 15 215 19 HOH HOH . D 3 HOH A 16 216 16 HOH HOH . D 3 HOH A 17 217 28 HOH HOH . D 3 HOH A 18 218 8 HOH HOH . D 3 HOH A 19 219 74 HOH HOH . D 3 HOH A 20 220 52 HOH HOH . D 3 HOH A 21 221 17 HOH HOH . D 3 HOH A 22 222 35 HOH HOH . D 3 HOH A 23 223 6 HOH HOH . D 3 HOH A 24 224 4 HOH HOH . D 3 HOH A 25 225 27 HOH HOH . D 3 HOH A 26 226 48 HOH HOH . D 3 HOH A 27 227 23 HOH HOH . D 3 HOH A 28 228 68 HOH HOH . D 3 HOH A 29 229 5 HOH HOH . D 3 HOH A 30 230 49 HOH HOH . D 3 HOH A 31 231 43 HOH HOH . D 3 HOH A 32 232 72 HOH HOH . D 3 HOH A 33 233 67 HOH HOH . D 3 HOH A 34 234 62 HOH HOH . D 3 HOH A 35 235 80 HOH HOH . D 3 HOH A 36 236 53 HOH HOH . D 3 HOH A 37 237 79 HOH HOH . D 3 HOH A 38 238 78 HOH HOH . D 3 HOH A 39 239 81 HOH HOH . D 3 HOH A 40 240 46 HOH HOH . D 3 HOH A 41 241 42 HOH HOH . D 3 HOH A 42 242 47 HOH HOH . D 3 HOH A 43 243 61 HOH HOH . D 3 HOH A 44 244 41 HOH HOH . E 3 HOH B 1 301 18 HOH HOH . E 3 HOH B 2 302 54 HOH HOH . E 3 HOH B 3 303 20 HOH HOH . E 3 HOH B 4 304 39 HOH HOH . E 3 HOH B 5 305 25 HOH HOH . E 3 HOH B 6 306 7 HOH HOH . E 3 HOH B 7 307 10 HOH HOH . E 3 HOH B 8 308 3 HOH HOH . E 3 HOH B 9 309 77 HOH HOH . E 3 HOH B 10 310 64 HOH HOH . E 3 HOH B 11 311 26 HOH HOH . E 3 HOH B 12 312 29 HOH HOH . E 3 HOH B 13 313 56 HOH HOH . E 3 HOH B 14 314 36 HOH HOH . E 3 HOH B 15 315 34 HOH HOH . E 3 HOH B 16 316 58 HOH HOH . E 3 HOH B 17 317 82 HOH HOH . E 3 HOH B 18 318 13 HOH HOH . E 3 HOH B 19 319 14 HOH HOH . E 3 HOH B 20 320 55 HOH HOH . E 3 HOH B 21 321 59 HOH HOH . E 3 HOH B 22 322 11 HOH HOH . E 3 HOH B 23 323 44 HOH HOH . E 3 HOH B 24 324 30 HOH HOH . E 3 HOH B 25 325 2 HOH HOH . E 3 HOH B 26 326 38 HOH HOH . E 3 HOH B 27 327 66 HOH HOH . E 3 HOH B 28 328 57 HOH HOH . E 3 HOH B 29 329 12 HOH HOH . E 3 HOH B 30 330 40 HOH HOH . E 3 HOH B 31 331 60 HOH HOH . E 3 HOH B 32 332 65 HOH HOH . E 3 HOH B 33 333 76 HOH HOH . E 3 HOH B 34 334 31 HOH HOH . E 3 HOH B 35 335 15 HOH HOH . E 3 HOH B 36 336 75 HOH HOH . E 3 HOH B 37 337 37 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 55.078 _atom_site.Cartn_y 6.581 _atom_site.Cartn_z -13.489 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #