data_6DE5
#
_model_server_result.job_id            lFfoZBVTeb-HXELqlYgEZg 
_model_server_result.datetime_utc      '2024-11-28 12:05:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6de5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6DE5 
#
_exptl.entry_id    6DE5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              373.451 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-ethyl-5-{(3S)-3-[2-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6DE5 
_cell.length_a            70.44 
_cell.length_b            94.631 
_cell.length_c            75.5 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DE5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C22 H23 N5 O' 
_chem_comp.formula_weight    373.451 
_chem_comp.id                G8J 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-ethyl-5-{(3S)-3-[2-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
NAH C6 G8J sing 83 n n 
N1 C6 G8J doub 84 n y 
N1 C2 G8J sing 85 n y 
C6 C5 G8J sing 86 n y 
CAZ CAM G8J sing 87 n n 
NAG C2 G8J sing 88 n n 
C2 N3 G8J doub 89 n y 
C5 CAK G8J sing 90 n n 
C5 C4 G8J doub 91 n y 
CAK CAL G8J trip 92 n n 
CAL CAM G8J sing 93 n n 
CAM CAN G8J sing 94 n n 
N3 C4 G8J sing 95 n y 
C4 CAI G8J sing 96 n n 
OBA CAS G8J sing 97 n n 
OBA CBB G8J sing 98 n n 
CAN CAS G8J doub 99 n y 
CAN CAO G8J sing 100 n y 
CAS CAR G8J sing 101 n y 
CAO CAP G8J doub 102 n y 
CAI CAJ G8J sing 103 n n 
CAU CAV G8J doub 104 n y 
CAU CAT G8J sing 105 n y 
CAR CAQ G8J doub 106 n y 
CAP CAQ G8J sing 107 n y 
CAP CAT G8J sing 108 n n 
CAV NAW G8J sing 109 n y 
CAT CAY G8J doub 110 n y 
NAW CAX G8J doub 111 n y 
CAY CAX G8J sing 112 n y 
CAJ H1 G8J sing 113 n n 
CAJ H2 G8J sing 114 n n 
CAJ H3 G8J sing 115 n n 
CAI H4 G8J sing 116 n n 
CAI H5 G8J sing 117 n n 
NAG H6 G8J sing 118 n n 
NAG H7 G8J sing 119 n n 
NAH H8 G8J sing 120 n n 
NAH H9 G8J sing 121 n n 
CAM H10 G8J sing 122 n n 
CAZ H11 G8J sing 123 n n 
CAZ H12 G8J sing 124 n n 
CAZ H13 G8J sing 125 n n 
CAO H14 G8J sing 126 n n 
CBB H15 G8J sing 127 n n 
CBB H16 G8J sing 128 n n 
CBB H17 G8J sing 129 n n 
CAR H18 G8J sing 130 n n 
CAQ H19 G8J sing 131 n n 
CAU H20 G8J sing 132 n n 
CAV H21 G8J sing 133 n n 
CAX H22 G8J sing 134 n n 
CAY H23 G8J sing 135 n n 
#
_atom_sites.entry_id                     6DE5 
_atom_sites.fract_transf_matrix[1][1]    0.014196 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010567 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013245 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDP A 1 301 461 NDP NDP . 
C 3 G8J A 1 302 462 G8J DRG . 
D 4 HOH A 1 401 4 HOH HOH . 
D 4 HOH A 2 402 28 HOH HOH . 
D 4 HOH A 3 403 26 HOH HOH . 
D 4 HOH A 4 404 36 HOH HOH . 
D 4 HOH A 5 405 13 HOH HOH . 
D 4 HOH A 6 406 8 HOH HOH . 
D 4 HOH A 7 407 25 HOH HOH . 
D 4 HOH A 8 408 15 HOH HOH . 
D 4 HOH A 9 409 11 HOH HOH . 
D 4 HOH A 10 410 18 HOH HOH . 
D 4 HOH A 11 411 24 HOH HOH . 
D 4 HOH A 12 412 14 HOH HOH . 
D 4 HOH A 13 413 5 HOH HOH . 
D 4 HOH A 14 414 16 HOH HOH . 
D 4 HOH A 15 415 2 HOH HOH . 
D 4 HOH A 16 416 34 HOH HOH . 
D 4 HOH A 17 417 12 HOH HOH . 
D 4 HOH A 18 418 6 HOH HOH . 
D 4 HOH A 19 419 33 HOH HOH . 
D 4 HOH A 20 420 10 HOH HOH . 
D 4 HOH A 21 421 32 HOH HOH . 
D 4 HOH A 22 422 17 HOH HOH . 
D 4 HOH A 23 423 27 HOH HOH . 
D 4 HOH A 24 424 3 HOH HOH . 
D 4 HOH A 25 425 9 HOH HOH . 
D 4 HOH A 26 426 31 HOH HOH . 
D 4 HOH A 27 427 29 HOH HOH . 
D 4 HOH A 28 428 19 HOH HOH . 
D 4 HOH A 29 429 21 HOH HOH . 
D 4 HOH A 30 430 35 HOH HOH . 
D 4 HOH A 31 431 1 HOH HOH . 
D 4 HOH A 32 432 22 HOH HOH . 
D 4 HOH A 33 433 30 HOH HOH . 
D 4 HOH A 34 434 23 HOH HOH . 
D 4 HOH A 35 435 20 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 G8J . . . C 3 -13.976 -19.212 21.463 1 19.13 ? C4 G8J 302 A 1 
HETATM 2 C C5 G8J . . . C 3 -14.118 -20.114 20.427 1 18.9 ? C5 G8J 302 A 1 
HETATM 3 C C6 G8J . . . C 3 -13.494 -19.825 19.203 1 20.56 ? C6 G8J 302 A 1 
HETATM 4 N N1 G8J . . . C 3 -12.785 -18.694 19.054 1 19.61 ? N1 G8J 302 A 1 
HETATM 5 N N3 G8J . . . C 3 -13.255 -18.11 21.249 1 21.44 ? N3 G8J 302 A 1 
HETATM 6 C CAJ G8J . . . C 3 -15.559 -18.287 23.003 1 16.24 ? CAJ G8J 302 A 1 
HETATM 7 C CAI G8J . . . C 3 -14.577 -19.431 22.707 1 20.98 ? CAI G8J 302 A 1 
HETATM 8 C C2 G8J . . . C 3 -12.664 -17.839 20.079 1 17.85 ? C2 G8J 302 A 1 
HETATM 9 N NAG G8J . . . C 3 -11.959 -16.714 19.948 1 17.99 ? NAG G8J 302 A 1 
HETATM 10 N NAH G8J . . . C 3 -13.635 -20.693 18.192 1 15.64 ? NAH G8J 302 A 1 
HETATM 11 C CAK G8J . . . C 3 -14.894 -21.284 20.642 1 22.49 ? CAK G8J 302 A 1 
HETATM 12 C CAL G8J . . . C 3 -15.503 -22.213 20.787 1 23.81 ? CAL G8J 302 A 1 
HETATM 13 C CAM G8J . . . C 3 -16.286 -23.44 20.903 1 29.46 ? CAM G8J 302 A 1 
HETATM 14 C CAZ G8J . . . C 3 -16.945 -23.68 19.536 1 27.79 ? CAZ G8J 302 A 1 
HETATM 15 C CAN G8J . . . C 3 -17.278 -23.317 21.891 1 27.7 ? CAN G8J 302 A 1 
HETATM 16 C CAO G8J . . . C 3 -17.647 -22.057 22.391 1 26.74 ? CAO G8J 302 A 1 
HETATM 17 C CAS G8J . . . C 3 -17.907 -24.464 22.378 1 28.01 ? CAS G8J 302 A 1 
HETATM 18 O OBA G8J . . . C 3 -17.512 -25.667 21.85 1 28.79 ? OBA G8J 302 A 1 
HETATM 19 C CBB G8J . . . C 3 -18.177 -26.755 22.499 1 32.72 ? CBB G8J 302 A 1 
HETATM 20 C CAR G8J . . . C 3 -18.892 -24.36 23.355 1 27.55 ? CAR G8J 302 A 1 
HETATM 21 C CAQ G8J . . . C 3 -19.241 -23.097 23.836 1 27.01 ? CAQ G8J 302 A 1 
HETATM 22 C CAP G8J . . . C 3 -18.631 -21.935 23.368 1 23.89 ? CAP G8J 302 A 1 
HETATM 23 C CAT G8J . . . C 3 -19.015 -20.695 23.907 1 29.59 ? CAT G8J 302 A 1 
HETATM 24 C CAU G8J . . . C 3 -18.909 -19.508 23.188 1 25.14 ? CAU G8J 302 A 1 
HETATM 25 C CAV G8J . . . C 3 -19.298 -18.29 23.756 1 26.4 ? CAV G8J 302 A 1 
HETATM 26 N NAW G8J . . . C 3 -19.807 -18.235 25.078 1 37.48 ? NAW G8J 302 A 1 
HETATM 27 C CAX G8J . . . C 3 -19.909 -19.427 25.815 1 31.64 ? CAX G8J 302 A 1 
HETATM 28 C CAY G8J . . . C 3 -19.514 -20.632 25.219 1 37.56 ? CAY G8J 302 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           28 
#