data_6DF6 # _model_server_result.job_id gX-5AOQU1rBp5qdE0Of1AQ _model_server_result.datetime_utc '2024-10-11 19:23:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6df6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6DF6 # _exptl.entry_id 6DF6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 489.535 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8R)-8-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-1,8-dihydro-2H-[1]benzopyrano[4,3-d][1]benzoxepine-5,11-diol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 79.75 _cell.angle_beta 75.42 _cell.angle_gamma 63.1 _cell.entry_id 6DF6 _cell.length_a 53.386 _cell.length_b 58.857 _cell.length_c 94.046 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DF6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C29 H28 F N O5' _chem_comp.formula_weight 489.535 _chem_comp.id G8Y _chem_comp.mon_nstd_flag . _chem_comp.name (8R)-8-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-1,8-dihydro-2H-[1]benzopyrano[4,3-d][1]benzoxepine-5,11-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 O13 G8Y sing 83 n n C12 C11 G8Y sing 84 n n O20 C18 G8Y sing 85 n n O13 C14 G8Y sing 86 n n C19 C18 G8Y doub 87 n y C19 C14 G8Y sing 88 n y C18 C17 G8Y sing 89 n y C14 C15 G8Y doub 90 n y C11 C10 G8Y sing 91 n n C17 C16 G8Y doub 92 n y C15 C16 G8Y sing 93 n y C15 C9 G8Y sing 94 n n C10 C9 G8Y doub 95 n n C10 C21 G8Y sing 96 n n C9 C7 G8Y sing 97 n n C21 C22 G8Y doub 98 n y C21 C26 G8Y sing 99 n y C22 C23 G8Y sing 100 n y O27 C7 G8Y sing 101 n n O27 C26 G8Y sing 102 n n C7 C6 G8Y sing 103 n n C26 C25 G8Y doub 104 n y C23 C24 G8Y doub 105 n y C25 C24 G8Y sing 106 n y C24 O28 G8Y sing 107 n n C6 C1 G8Y doub 108 n y C6 C5 G8Y sing 109 n y C1 C2 G8Y sing 110 n y C5 C4 G8Y doub 111 n y C2 C3 G8Y doub 112 n y C4 C3 G8Y sing 113 n y C3 O29 G8Y sing 114 n n O29 C30 G8Y sing 115 n n C30 C31 G8Y sing 116 n n C31 N32 G8Y sing 117 n n N32 C35 G8Y sing 118 n n N32 C33 G8Y sing 119 n n C35 C34 G8Y sing 120 n n C33 C34 G8Y sing 121 n n C34 C36 G8Y sing 122 n n C36 F37 G8Y sing 123 n n C4 H1 G8Y sing 124 n n C5 H2 G8Y sing 125 n n C11 H3 G8Y sing 126 n n C11 H4 G8Y sing 127 n n C7 H5 G8Y sing 128 n n C12 H6 G8Y sing 129 n n C12 H7 G8Y sing 130 n n C1 H8 G8Y sing 131 n n C2 H9 G8Y sing 132 n n C16 H10 G8Y sing 133 n n C17 H11 G8Y sing 134 n n C19 H12 G8Y sing 135 n n O20 H13 G8Y sing 136 n n C22 H14 G8Y sing 137 n n C23 H15 G8Y sing 138 n n C25 H16 G8Y sing 139 n n O28 H17 G8Y sing 140 n n C30 H18 G8Y sing 141 n n C30 H19 G8Y sing 142 n n C31 H20 G8Y sing 143 n n C31 H21 G8Y sing 144 n n C33 H23 G8Y sing 145 n n C33 H24 G8Y sing 146 n n C34 H25 G8Y sing 147 n n C35 H26 G8Y sing 148 n n C35 H27 G8Y sing 149 n n C36 H28 G8Y sing 150 n n C36 H29 G8Y sing 151 n n # _atom_sites.entry_id 6DF6 _atom_sites.fract_transf_matrix[1][1] 0.018732 _atom_sites.fract_transf_matrix[1][2] -0.009502 _atom_sites.fract_transf_matrix[1][3] -0.00418 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019051 _atom_sites.fract_transf_matrix[2][3] -0.001417 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G8Y A 1 601 1 G8Y DRG . F 2 G8Y B 1 601 2 G8Y DRG . G 3 GOL B 1 602 1 GOL GOL . H 2 G8Y C 1 601 3 G8Y DRG . I 2 G8Y D 1 601 4 G8Y DRG . J 3 GOL D 1 602 2 GOL GOL . K 4 HOH A 1 701 20 HOH HOH . K 4 HOH A 2 702 11 HOH HOH . K 4 HOH A 3 703 10 HOH HOH . K 4 HOH A 4 704 17 HOH HOH . K 4 HOH A 5 705 14 HOH HOH . K 4 HOH A 6 706 1 HOH HOH . L 4 HOH B 1 701 18 HOH HOH . L 4 HOH B 2 702 13 HOH HOH . L 4 HOH B 3 703 12 HOH HOH . L 4 HOH B 4 704 15 HOH HOH . L 4 HOH B 5 705 16 HOH HOH . L 4 HOH B 6 706 7 HOH HOH . M 4 HOH C 1 701 4 HOH HOH . M 4 HOH C 2 702 3 HOH HOH . M 4 HOH C 3 703 5 HOH HOH . N 4 HOH D 1 701 2 HOH HOH . N 4 HOH D 2 702 9 HOH HOH . N 4 HOH D 3 703 8 HOH HOH . N 4 HOH D 4 704 19 HOH HOH . N 4 HOH D 5 705 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 G8Y . . . E 2 57.652 12.789 60.596 1 48.95 ? C4 G8Y 601 A 1 HETATM 2 C C14 G8Y . . . E 2 55.451 10.741 54.178 1 46.05 ? C14 G8Y 601 A 1 HETATM 3 C C5 G8Y . . . E 2 57.975 13.007 59.263 1 48.25 ? C5 G8Y 601 A 1 HETATM 4 C C6 G8Y . . . E 2 57.506 12.131 58.279 1 48.38 ? C6 G8Y 601 A 1 HETATM 5 C C11 G8Y . . . E 2 57.918 9.039 54.828 1 48.1 ? C11 G8Y 601 A 1 HETATM 6 C C7 G8Y . . . E 2 57.872 12.399 56.826 1 48.18 ? C7 G8Y 601 A 1 HETATM 7 C C9 G8Y . . . E 2 57.362 11.308 55.889 1 47.16 ? C9 G8Y 601 A 1 HETATM 8 C C10 G8Y . . . E 2 58.215 10.221 55.713 1 48.59 ? C10 G8Y 601 A 1 HETATM 9 C C12 G8Y . . . E 2 57.413 9.469 53.465 1 47.6 ? C12 G8Y 601 A 1 HETATM 10 C C3 G8Y . . . E 2 56.855 11.693 60.952 1 49.83 ? C3 G8Y 601 A 1 HETATM 11 C C1 G8Y . . . E 2 56.708 11.041 58.645 1 47.45 ? C1 G8Y 601 A 1 HETATM 12 C C2 G8Y . . . E 2 56.379 10.822 59.973 1 47.07 ? C2 G8Y 601 A 1 HETATM 13 O O13 G8Y . . . E 2 56.014 9.637 53.604 1 46.89 ? O13 G8Y 601 A 1 HETATM 14 C C15 G8Y . . . E 2 56.017 11.528 55.244 1 46.08 ? C15 G8Y 601 A 1 HETATM 15 C C16 G8Y . . . E 2 55.25 12.632 55.681 1 45.22 ? C16 G8Y 601 A 1 HETATM 16 C C17 G8Y . . . E 2 54.01 12.949 55.156 1 44.75 ? C17 G8Y 601 A 1 HETATM 17 C C18 G8Y . . . E 2 53.484 12.161 54.141 1 44.93 ? C18 G8Y 601 A 1 HETATM 18 C C19 G8Y . . . E 2 54.204 11.071 53.665 1 45.12 ? C19 G8Y 601 A 1 HETATM 19 O O20 G8Y . . . E 2 52.272 12.451 53.602 1 44.75 ? O20 G8Y 601 A 1 HETATM 20 C C21 G8Y . . . E 2 59.532 10.21 56.409 1 50.17 ? C21 G8Y 601 A 1 HETATM 21 C C22 G8Y . . . E 2 60.324 9.056 56.579 1 50.97 ? C22 G8Y 601 A 1 HETATM 22 C C23 G8Y . . . E 2 61.558 9.144 57.224 1 52.12 ? C23 G8Y 601 A 1 HETATM 23 C C24 G8Y . . . E 2 62.023 10.383 57.695 1 52.62 ? C24 G8Y 601 A 1 HETATM 24 C C25 G8Y . . . E 2 61.262 11.536 57.533 1 51.7 ? C25 G8Y 601 A 1 HETATM 25 C C26 G8Y . . . E 2 60.039 11.454 56.883 1 51.31 ? C26 G8Y 601 A 1 HETATM 26 O O27 G8Y . . . E 2 59.285 12.561 56.717 1 49.71 ? O27 G8Y 601 A 1 HETATM 27 O O28 G8Y . . . E 2 63.219 10.486 58.325 1 54.29 ? O28 G8Y 601 A 1 HETATM 28 O O29 G8Y . . . E 2 56.498 11.44 62.237 1 52.57 ? O29 G8Y 601 A 1 HETATM 29 C C30 G8Y . . . E 2 57.294 11.835 63.355 1 54.68 ? C30 G8Y 601 A 1 HETATM 30 C C31 G8Y . . . E 2 56.507 11.428 64.602 1 59.63 ? C31 G8Y 601 A 1 HETATM 31 N N32 G8Y . . . E 2 55.217 12.144 64.652 1 61 ? N32 G8Y 601 A 1 HETATM 32 C C33 G8Y . . . E 2 55.025 12.742 65.987 1 64.88 ? C33 G8Y 601 A 1 HETATM 33 C C34 G8Y . . . E 2 53.759 11.903 66.228 1 66.31 ? C34 G8Y 601 A 1 HETATM 34 C C35 G8Y . . . E 2 54.057 11.251 64.863 1 61.96 ? C35 G8Y 601 A 1 HETATM 35 C C36 G8Y . . . E 2 52.474 12.735 66.309 1 70.88 ? C36 G8Y 601 A 1 HETATM 36 F F37 G8Y . . . E 2 52.509 13.578 67.433 1 72.67 ? F37 G8Y 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #