data_6DFN # _model_server_result.job_id 9I-153IJFsFy6qYkLKdgoA _model_server_result.datetime_utc '2024-11-24 17:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dfn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6DFN # _exptl.entry_id 6DFN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.273 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.05 _cell.angle_beta 74.92 _cell.angle_gamma 63.34 _cell.entry_id 6DFN _cell.length_a 53.089 _cell.length_b 59.134 _cell.length_c 94.18 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DFN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,O,P 1 1 C,D,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C22 H17 I O3' _chem_comp.formula_weight 456.273 _chem_comp.id G9J _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag I19 C16 G9J sing 152 n n C16 C15 G9J doub 153 n y C16 C17 G9J sing 154 n y C15 C14 G9J sing 155 n y C17 C18 G9J doub 156 n y C14 C13 G9J doub 157 n y C18 C13 G9J sing 158 n y C13 C4 G9J sing 159 n n C22 C21 G9J doub 160 n y C22 C23 G9J sing 161 n y C21 C20 G9J sing 162 n y C4 O5 G9J sing 163 n n C4 C3 G9J sing 164 n n C23 C24 G9J doub 165 n y O5 C6 G9J sing 166 n n C20 C3 G9J sing 167 n n C20 C25 G9J doub 168 n y C3 C2 G9J doub 169 n n C6 C11 G9J doub 170 n y C6 C7 G9J sing 171 n y C11 C10 G9J sing 172 n y C2 C7 G9J sing 173 n n C2 C1 G9J sing 174 n n C7 C8 G9J doub 175 n y C10 C9 G9J doub 176 n y C24 C25 G9J sing 177 n y C24 O26 G9J sing 178 n n C8 C9 G9J sing 179 n y C9 O12 G9J sing 180 n n C1 H1 G9J sing 181 n n C1 H2 G9J sing 182 n n C1 H3 G9J sing 183 n n C4 H4 G9J sing 184 n n C8 H5 G9J sing 185 n n C10 H6 G9J sing 186 n n C11 H7 G9J sing 187 n n O12 H8 G9J sing 188 n n C14 H9 G9J sing 189 n n C15 H10 G9J sing 190 n n C17 H11 G9J sing 191 n n C18 H12 G9J sing 192 n n C21 H13 G9J sing 193 n n C22 H14 G9J sing 194 n n C23 H15 G9J sing 195 n n C25 H16 G9J sing 196 n n O26 H17 G9J sing 197 n n # _atom_sites.entry_id 6DFN _atom_sites.fract_transf_matrix[1][1] 0.018836 _atom_sites.fract_transf_matrix[1][2] -0.009456 _atom_sites.fract_transf_matrix[1][3] -0.005607 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018922 _atom_sites.fract_transf_matrix[2][3] 0.00105 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011013 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G9J A 1 601 1 G9J RRG . F 3 NI A 1 602 1 NI NI . G 4 G91 B 1 601 1 G91 DRG . H 2 G9J B 1 602 1 G9J RRG . I 5 GOL B 1 603 2 GOL GOL . J 5 GOL B 1 604 3 GOL GOL . K 2 G9J C 1 601 2 G9J RRG . L 2 G9J D 1 601 3 G9J RRG . M 4 G91 D 1 602 2 G91 DRG . N 5 GOL D 1 603 1 GOL GOL . O 6 HOH A 1 701 8 HOH HOH . O 6 HOH A 2 702 31 HOH HOH . O 6 HOH A 3 703 27 HOH HOH . O 6 HOH A 4 704 10 HOH HOH . O 6 HOH A 5 705 34 HOH HOH . O 6 HOH A 6 706 4 HOH HOH . O 6 HOH A 7 707 7 HOH HOH . O 6 HOH A 8 708 25 HOH HOH . O 6 HOH A 9 709 35 HOH HOH . O 6 HOH A 10 710 6 HOH HOH . O 6 HOH A 11 711 2 HOH HOH . O 6 HOH A 12 712 33 HOH HOH . O 6 HOH A 13 713 45 HOH HOH . O 6 HOH A 14 714 5 HOH HOH . O 6 HOH A 15 715 36 HOH HOH . O 6 HOH A 16 716 44 HOH HOH . P 6 HOH B 1 701 29 HOH HOH . P 6 HOH B 2 702 23 HOH HOH . P 6 HOH B 3 703 12 HOH HOH . P 6 HOH B 4 704 24 HOH HOH . P 6 HOH B 5 705 1 HOH HOH . P 6 HOH B 6 706 28 HOH HOH . P 6 HOH B 7 707 9 HOH HOH . P 6 HOH B 8 708 30 HOH HOH . P 6 HOH B 9 709 11 HOH HOH . Q 6 HOH C 1 701 14 HOH HOH . Q 6 HOH C 2 702 43 HOH HOH . Q 6 HOH C 3 703 47 HOH HOH . Q 6 HOH C 4 704 46 HOH HOH . Q 6 HOH C 5 705 13 HOH HOH . Q 6 HOH C 6 706 42 HOH HOH . Q 6 HOH C 7 707 37 HOH HOH . Q 6 HOH C 8 708 26 HOH HOH . Q 6 HOH C 9 709 16 HOH HOH . Q 6 HOH C 10 710 17 HOH HOH . R 6 HOH D 1 701 39 HOH HOH . R 6 HOH D 2 702 40 HOH HOH . R 6 HOH D 3 703 21 HOH HOH . R 6 HOH D 4 704 19 HOH HOH . R 6 HOH D 5 705 41 HOH HOH . R 6 HOH D 6 706 18 HOH HOH . R 6 HOH D 7 707 38 HOH HOH . R 6 HOH D 8 708 20 HOH HOH . R 6 HOH D 9 709 22 HOH HOH . R 6 HOH D 10 710 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G9J . . . E 2 -60.374 10.803 -50.575 1 49.93 ? C1 G9J 601 A 1 HETATM 2 C C2 G9J . . . E 2 -60.464 12.086 -51.385 1 50.95 ? C2 G9J 601 A 1 HETATM 3 C C3 G9J . . . E 2 -61.567 12.401 -52.141 1 53.01 ? C3 G9J 601 A 1 HETATM 4 C C4 G9J . . . E 2 -61.631 13.691 -52.927 1 52.32 ? C4 G9J 601 A 1 HETATM 5 O O5 G9J . . . E 2 -60.767 14.687 -52.376 1 51.54 ? O5 G9J 601 A 1 HETATM 6 C C6 G9J . . . E 2 -59.553 14.356 -51.87 1 49.6 ? C6 G9J 601 A 1 HETATM 7 C C7 G9J . . . E 2 -59.329 13.052 -51.362 1 49.59 ? C7 G9J 601 A 1 HETATM 8 C C8 G9J . . . E 2 -58.067 12.746 -50.833 1 49 ? C8 G9J 601 A 1 HETATM 9 C C9 G9J . . . E 2 -57.069 13.719 -50.836 1 48.47 ? C9 G9J 601 A 1 HETATM 10 C C10 G9J . . . E 2 -57.306 14.989 -51.348 1 48.94 ? C10 G9J 601 A 1 HETATM 11 C C11 G9J . . . E 2 -58.548 15.313 -51.866 1 50.02 ? C11 G9J 601 A 1 HETATM 12 O O12 G9J . . . E 2 -55.844 13.43 -50.328 1 51.47 ? O12 G9J 601 A 1 HETATM 13 C C13 G9J . . . E 2 -61.235 13.515 -54.372 1 53.57 ? C13 G9J 601 A 1 HETATM 14 C C14 G9J . . . E 2 -61.837 14.331 -55.321 1 55.47 ? C14 G9J 601 A 1 HETATM 15 C C15 G9J . . . E 2 -61.491 14.207 -56.658 1 53.43 ? C15 G9J 601 A 1 HETATM 16 C C16 G9J . . . E 2 -60.536 13.273 -57.034 1 56.12 ? C16 G9J 601 A 1 HETATM 17 C C17 G9J . . . E 2 -59.921 12.454 -56.097 1 55.5 ? C17 G9J 601 A 1 HETATM 18 C C18 G9J . . . E 2 -60.273 12.577 -54.761 1 54.48 ? C18 G9J 601 A 1 HETATM 19 I I19 G9J . . . E 2 -60.014 13.1 -59.047 1 66.21 ? I19 G9J 601 A 1 HETATM 20 C C20 G9J . . . E 2 -62.777 11.555 -52.214 1 57.25 ? C20 G9J 601 A 1 HETATM 21 C C21 G9J . . . E 2 -63.152 10.838 -53.366 1 59.73 ? C21 G9J 601 A 1 HETATM 22 C C22 G9J . . . E 2 -64.317 10.078 -53.361 1 62.63 ? C22 G9J 601 A 1 HETATM 23 C C23 G9J . . . E 2 -65.109 10.036 -52.217 1 62.66 ? C23 G9J 601 A 1 HETATM 24 C C24 G9J . . . E 2 -64.746 10.754 -51.072 1 64.6 ? C24 G9J 601 A 1 HETATM 25 C C25 G9J . . . E 2 -63.594 11.517 -51.074 1 60.63 ? C25 G9J 601 A 1 HETATM 26 O O26 G9J . . . E 2 -65.502 10.732 -49.944 1 68.39 ? O26 G9J 601 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #