data_6DFN # _model_server_result.job_id fowGL41Hp28KA2pNzghUsw _model_server_result.datetime_utc '2024-11-24 17:44:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dfn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":601}' # _entry.id 6DFN # _exptl.entry_id 6DFN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.273 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.05 _cell.angle_beta 74.92 _cell.angle_gamma 63.34 _cell.entry_id 6DFN _cell.length_a 53.089 _cell.length_b 59.134 _cell.length_c 94.18 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DFN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,O,P 1 1 C,D,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C22 H17 I O3' _chem_comp.formula_weight 456.273 _chem_comp.id G9J _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag I19 C16 G9J sing 152 n n C16 C15 G9J doub 153 n y C16 C17 G9J sing 154 n y C15 C14 G9J sing 155 n y C17 C18 G9J doub 156 n y C14 C13 G9J doub 157 n y C18 C13 G9J sing 158 n y C13 C4 G9J sing 159 n n C22 C21 G9J doub 160 n y C22 C23 G9J sing 161 n y C21 C20 G9J sing 162 n y C4 O5 G9J sing 163 n n C4 C3 G9J sing 164 n n C23 C24 G9J doub 165 n y O5 C6 G9J sing 166 n n C20 C3 G9J sing 167 n n C20 C25 G9J doub 168 n y C3 C2 G9J doub 169 n n C6 C11 G9J doub 170 n y C6 C7 G9J sing 171 n y C11 C10 G9J sing 172 n y C2 C7 G9J sing 173 n n C2 C1 G9J sing 174 n n C7 C8 G9J doub 175 n y C10 C9 G9J doub 176 n y C24 C25 G9J sing 177 n y C24 O26 G9J sing 178 n n C8 C9 G9J sing 179 n y C9 O12 G9J sing 180 n n C1 H1 G9J sing 181 n n C1 H2 G9J sing 182 n n C1 H3 G9J sing 183 n n C4 H4 G9J sing 184 n n C8 H5 G9J sing 185 n n C10 H6 G9J sing 186 n n C11 H7 G9J sing 187 n n O12 H8 G9J sing 188 n n C14 H9 G9J sing 189 n n C15 H10 G9J sing 190 n n C17 H11 G9J sing 191 n n C18 H12 G9J sing 192 n n C21 H13 G9J sing 193 n n C22 H14 G9J sing 194 n n C23 H15 G9J sing 195 n n C25 H16 G9J sing 196 n n O26 H17 G9J sing 197 n n # _atom_sites.entry_id 6DFN _atom_sites.fract_transf_matrix[1][1] 0.018836 _atom_sites.fract_transf_matrix[1][2] -0.009456 _atom_sites.fract_transf_matrix[1][3] -0.005607 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018922 _atom_sites.fract_transf_matrix[2][3] 0.00105 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011013 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G9J A 1 601 1 G9J RRG . F 3 NI A 1 602 1 NI NI . G 4 G91 B 1 601 1 G91 DRG . H 2 G9J B 1 602 1 G9J RRG . I 5 GOL B 1 603 2 GOL GOL . J 5 GOL B 1 604 3 GOL GOL . K 2 G9J C 1 601 2 G9J RRG . L 2 G9J D 1 601 3 G9J RRG . M 4 G91 D 1 602 2 G91 DRG . N 5 GOL D 1 603 1 GOL GOL . O 6 HOH A 1 701 8 HOH HOH . O 6 HOH A 2 702 31 HOH HOH . O 6 HOH A 3 703 27 HOH HOH . O 6 HOH A 4 704 10 HOH HOH . O 6 HOH A 5 705 34 HOH HOH . O 6 HOH A 6 706 4 HOH HOH . O 6 HOH A 7 707 7 HOH HOH . O 6 HOH A 8 708 25 HOH HOH . O 6 HOH A 9 709 35 HOH HOH . O 6 HOH A 10 710 6 HOH HOH . O 6 HOH A 11 711 2 HOH HOH . O 6 HOH A 12 712 33 HOH HOH . O 6 HOH A 13 713 45 HOH HOH . O 6 HOH A 14 714 5 HOH HOH . O 6 HOH A 15 715 36 HOH HOH . O 6 HOH A 16 716 44 HOH HOH . P 6 HOH B 1 701 29 HOH HOH . P 6 HOH B 2 702 23 HOH HOH . P 6 HOH B 3 703 12 HOH HOH . P 6 HOH B 4 704 24 HOH HOH . P 6 HOH B 5 705 1 HOH HOH . P 6 HOH B 6 706 28 HOH HOH . P 6 HOH B 7 707 9 HOH HOH . P 6 HOH B 8 708 30 HOH HOH . P 6 HOH B 9 709 11 HOH HOH . Q 6 HOH C 1 701 14 HOH HOH . Q 6 HOH C 2 702 43 HOH HOH . Q 6 HOH C 3 703 47 HOH HOH . Q 6 HOH C 4 704 46 HOH HOH . Q 6 HOH C 5 705 13 HOH HOH . Q 6 HOH C 6 706 42 HOH HOH . Q 6 HOH C 7 707 37 HOH HOH . Q 6 HOH C 8 708 26 HOH HOH . Q 6 HOH C 9 709 16 HOH HOH . Q 6 HOH C 10 710 17 HOH HOH . R 6 HOH D 1 701 39 HOH HOH . R 6 HOH D 2 702 40 HOH HOH . R 6 HOH D 3 703 21 HOH HOH . R 6 HOH D 4 704 19 HOH HOH . R 6 HOH D 5 705 41 HOH HOH . R 6 HOH D 6 706 18 HOH HOH . R 6 HOH D 7 707 38 HOH HOH . R 6 HOH D 8 708 20 HOH HOH . R 6 HOH D 9 709 22 HOH HOH . R 6 HOH D 10 710 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G9J . . . K 2 -60.254 -6.623 -93.119 1 51.97 ? C1 G9J 601 C 1 HETATM 2 C C2 G9J . . . K 2 -60.432 -7.96 -92.433 1 53.25 ? C2 G9J 601 C 1 HETATM 3 C C3 G9J . . . K 2 -61.519 -8.235 -91.64 1 57.86 ? C3 G9J 601 C 1 HETATM 4 C C4 G9J . . . K 2 -61.624 -9.584 -90.957 1 57.12 ? C4 G9J 601 C 1 HETATM 5 O O5 G9J . . . K 2 -60.896 -10.612 -91.643 1 56.47 ? O5 G9J 601 C 1 HETATM 6 C C6 G9J . . . K 2 -59.663 -10.332 -92.13 1 52.61 ? C6 G9J 601 C 1 HETATM 7 C C7 G9J . . . K 2 -59.378 -9.02 -92.569 1 52.19 ? C7 G9J 601 C 1 HETATM 8 C C8 G9J . . . K 2 -58.083 -8.751 -93.049 1 51.16 ? C8 G9J 601 C 1 HETATM 9 C C9 G9J . . . K 2 -57.139 -9.776 -93.113 1 51.8 ? C9 G9J 601 C 1 HETATM 10 C C10 G9J . . . K 2 -57.448 -11.065 -92.688 1 51.85 ? C10 G9J 601 C 1 HETATM 11 C C11 G9J . . . K 2 -58.714 -11.342 -92.195 1 53.32 ? C11 G9J 601 C 1 HETATM 12 O O12 G9J . . . K 2 -55.897 -9.523 -93.593 1 49.92 ? O12 G9J 601 C 1 HETATM 13 C C13 G9J . . . K 2 -61.215 -9.467 -89.511 1 56.36 ? C13 G9J 601 C 1 HETATM 14 C C14 G9J . . . K 2 -61.855 -10.272 -88.575 1 55.77 ? C14 G9J 601 C 1 HETATM 15 C C15 G9J . . . K 2 -61.505 -10.169 -87.239 1 55.59 ? C15 G9J 601 C 1 HETATM 16 C C16 G9J . . . K 2 -60.522 -9.262 -86.847 1 59.3 ? C16 G9J 601 C 1 HETATM 17 C C17 G9J . . . K 2 -59.885 -8.45 -87.77 1 55.9 ? C17 G9J 601 C 1 HETATM 18 C C18 G9J . . . K 2 -60.232 -8.557 -89.107 1 58.1 ? C18 G9J 601 C 1 HETATM 19 I I19 G9J . . . K 2 -59.989 -9.108 -84.831 1 67.04 ? I19 G9J 601 C 1 HETATM 20 C C20 G9J . . . K 2 -62.642 -7.313 -91.309 1 62.5 ? C20 G9J 601 C 1 HETATM 21 C C21 G9J . . . K 2 -62.384 -6.249 -90.417 1 66.83 ? C21 G9J 601 C 1 HETATM 22 C C22 G9J . . . K 2 -63.376 -5.363 -90.026 1 69.11 ? C22 G9J 601 C 1 HETATM 23 C C23 G9J . . . K 2 -64.666 -5.544 -90.504 1 67.57 ? C23 G9J 601 C 1 HETATM 24 C C24 G9J . . . K 2 -64.953 -6.601 -91.366 1 68.19 ? C24 G9J 601 C 1 HETATM 25 C C25 G9J . . . K 2 -63.959 -7.498 -91.77 1 65.79 ? C25 G9J 601 C 1 HETATM 26 O O26 G9J . . . K 2 -66.225 -6.741 -91.807 1 73.07 ? O26 G9J 601 C 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 558 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #