data_6DFN
#
_model_server_result.job_id            U41x6H3NIwSTg67HCZABpA 
_model_server_result.datetime_utc      '2024-11-28 10:29:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6dfn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":601}' 
#
_entry.id    6DFN 
#
_exptl.entry_id    6DFN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.273 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         86.05 
_cell.angle_beta          74.92 
_cell.angle_gamma         63.34 
_cell.entry_id            6DFN 
_cell.length_a            53.089 
_cell.length_b            59.134 
_cell.length_c            94.18 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DFN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,O,P 1 1 
C,D,K,L,M,N,Q,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C22 H17 I O3' 
_chem_comp.formula_weight    456.273 
_chem_comp.id                G9J 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
I19 C16 G9J sing 152 n n 
C16 C15 G9J doub 153 n y 
C16 C17 G9J sing 154 n y 
C15 C14 G9J sing 155 n y 
C17 C18 G9J doub 156 n y 
C14 C13 G9J doub 157 n y 
C18 C13 G9J sing 158 n y 
C13 C4 G9J sing 159 n n 
C22 C21 G9J doub 160 n y 
C22 C23 G9J sing 161 n y 
C21 C20 G9J sing 162 n y 
C4 O5 G9J sing 163 n n 
C4 C3 G9J sing 164 n n 
C23 C24 G9J doub 165 n y 
O5 C6 G9J sing 166 n n 
C20 C3 G9J sing 167 n n 
C20 C25 G9J doub 168 n y 
C3 C2 G9J doub 169 n n 
C6 C11 G9J doub 170 n y 
C6 C7 G9J sing 171 n y 
C11 C10 G9J sing 172 n y 
C2 C7 G9J sing 173 n n 
C2 C1 G9J sing 174 n n 
C7 C8 G9J doub 175 n y 
C10 C9 G9J doub 176 n y 
C24 C25 G9J sing 177 n y 
C24 O26 G9J sing 178 n n 
C8 C9 G9J sing 179 n y 
C9 O12 G9J sing 180 n n 
C1 H1 G9J sing 181 n n 
C1 H2 G9J sing 182 n n 
C1 H3 G9J sing 183 n n 
C4 H4 G9J sing 184 n n 
C8 H5 G9J sing 185 n n 
C10 H6 G9J sing 186 n n 
C11 H7 G9J sing 187 n n 
O12 H8 G9J sing 188 n n 
C14 H9 G9J sing 189 n n 
C15 H10 G9J sing 190 n n 
C17 H11 G9J sing 191 n n 
C18 H12 G9J sing 192 n n 
C21 H13 G9J sing 193 n n 
C22 H14 G9J sing 194 n n 
C23 H15 G9J sing 195 n n 
C25 H16 G9J sing 196 n n 
O26 H17 G9J sing 197 n n 
#
_atom_sites.entry_id                     6DFN 
_atom_sites.fract_transf_matrix[1][1]    0.018836 
_atom_sites.fract_transf_matrix[1][2]    -0.009456 
_atom_sites.fract_transf_matrix[1][3]    -0.005607 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018922 
_atom_sites.fract_transf_matrix[2][3]    0.00105 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011013 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 G9J A 1 601 1 G9J RRG . 
F 3 NI A 1 602 1 NI NI . 
G 4 G91 B 1 601 1 G91 DRG . 
H 2 G9J B 1 602 1 G9J RRG . 
I 5 GOL B 1 603 2 GOL GOL . 
J 5 GOL B 1 604 3 GOL GOL . 
K 2 G9J C 1 601 2 G9J RRG . 
L 2 G9J D 1 601 3 G9J RRG . 
M 4 G91 D 1 602 2 G91 DRG . 
N 5 GOL D 1 603 1 GOL GOL . 
O 6 HOH A 1 701 8 HOH HOH . 
O 6 HOH A 2 702 31 HOH HOH . 
O 6 HOH A 3 703 27 HOH HOH . 
O 6 HOH A 4 704 10 HOH HOH . 
O 6 HOH A 5 705 34 HOH HOH . 
O 6 HOH A 6 706 4 HOH HOH . 
O 6 HOH A 7 707 7 HOH HOH . 
O 6 HOH A 8 708 25 HOH HOH . 
O 6 HOH A 9 709 35 HOH HOH . 
O 6 HOH A 10 710 6 HOH HOH . 
O 6 HOH A 11 711 2 HOH HOH . 
O 6 HOH A 12 712 33 HOH HOH . 
O 6 HOH A 13 713 45 HOH HOH . 
O 6 HOH A 14 714 5 HOH HOH . 
O 6 HOH A 15 715 36 HOH HOH . 
O 6 HOH A 16 716 44 HOH HOH . 
P 6 HOH B 1 701 29 HOH HOH . 
P 6 HOH B 2 702 23 HOH HOH . 
P 6 HOH B 3 703 12 HOH HOH . 
P 6 HOH B 4 704 24 HOH HOH . 
P 6 HOH B 5 705 1 HOH HOH . 
P 6 HOH B 6 706 28 HOH HOH . 
P 6 HOH B 7 707 9 HOH HOH . 
P 6 HOH B 8 708 30 HOH HOH . 
P 6 HOH B 9 709 11 HOH HOH . 
Q 6 HOH C 1 701 14 HOH HOH . 
Q 6 HOH C 2 702 43 HOH HOH . 
Q 6 HOH C 3 703 47 HOH HOH . 
Q 6 HOH C 4 704 46 HOH HOH . 
Q 6 HOH C 5 705 13 HOH HOH . 
Q 6 HOH C 6 706 42 HOH HOH . 
Q 6 HOH C 7 707 37 HOH HOH . 
Q 6 HOH C 8 708 26 HOH HOH . 
Q 6 HOH C 9 709 16 HOH HOH . 
Q 6 HOH C 10 710 17 HOH HOH . 
R 6 HOH D 1 701 39 HOH HOH . 
R 6 HOH D 2 702 40 HOH HOH . 
R 6 HOH D 3 703 21 HOH HOH . 
R 6 HOH D 4 704 19 HOH HOH . 
R 6 HOH D 5 705 41 HOH HOH . 
R 6 HOH D 6 706 18 HOH HOH . 
R 6 HOH D 7 707 38 HOH HOH . 
R 6 HOH D 8 708 20 HOH HOH . 
R 6 HOH D 9 709 22 HOH HOH . 
R 6 HOH D 10 710 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 G9J . B . L 2 -67.207 20.044 -85.201 0.5 56.69 ? C1 G9J 601 D 1 
HETATM 2 C C2 G9J . B . L 2 -68.454 20.709 -84.68 0.5 54.83 ? C2 G9J 601 D 1 
HETATM 3 C C3 G9J . B . L 2 -69.297 20.043 -83.866 0.5 55.45 ? C3 G9J 601 D 1 
HETATM 4 C C4 G9J . B . L 2 -70.558 20.675 -83.345 0.5 56.07 ? C4 G9J 601 D 1 
HETATM 5 O O5 G9J . B . L 2 -70.535 22.099 -83.436 0.5 53.49 ? O5 G9J 601 D 1 
HETATM 6 C C6 G9J . B . L 2 -69.855 22.734 -84.424 0.5 54.53 ? C6 G9J 601 D 1 
HETATM 7 C C7 G9J . B . L 2 -68.792 22.089 -85.069 0.5 54.51 ? C7 G9J 601 D 1 
HETATM 8 C C8 G9J . B . L 2 -68.097 22.741 -86.085 0.5 54.31 ? C8 G9J 601 D 1 
HETATM 9 C C9 G9J . B . L 2 -68.45 24.034 -86.442 0.5 55.79 ? C9 G9J 601 D 1 
HETATM 10 C C10 G9J . B . L 2 -69.499 24.673 -85.791 0.5 55.61 ? C10 G9J 601 D 1 
HETATM 11 C C11 G9J . B . L 2 -70.197 24.024 -84.787 0.5 54.63 ? C11 G9J 601 D 1 
HETATM 12 O O12 G9J . B . L 2 -67.77 24.678 -87.43 0.5 53.82 ? O12 G9J 601 D 1 
HETATM 13 C C13 G9J . B . L 2 -71.736 20.115 -84.104 0.5 58.26 ? C13 G9J 601 D 1 
HETATM 14 C C14 G9J . B . L 2 -72.98 20.036 -83.503 0.5 58.73 ? C14 G9J 601 D 1 
HETATM 15 C C15 G9J . B . L 2 -74.057 19.521 -84.204 0.5 61.47 ? C15 G9J 601 D 1 
HETATM 16 C C16 G9J . B . L 2 -73.892 19.079 -85.507 0.5 62.46 ? C16 G9J 601 D 1 
HETATM 17 C C17 G9J . B . L 2 -72.646 19.154 -86.102 0.5 60.36 ? C17 G9J 601 D 1 
HETATM 18 C C18 G9J . B . L 2 -71.571 19.669 -85.402 0.5 58.53 ? C18 G9J 601 D 1 
HETATM 19 I I19 G9J . B . L 2 -75.518 18.296 -86.579 0.5 71.14 ? I19 G9J 601 D 1 
HETATM 20 C C20 G9J . B . L 2 -69.02 18.652 -83.479 0.5 55.33 ? C20 G9J 601 D 1 
HETATM 21 C C21 G9J . B . L 2 -68.825 17.702 -84.48 0.5 54.09 ? C21 G9J 601 D 1 
HETATM 22 C C22 G9J . B . L 2 -68.579 16.388 -84.152 0.5 54.93 ? C22 G9J 601 D 1 
HETATM 23 C C23 G9J . B . L 2 -68.531 16.007 -82.828 0.5 53.26 ? C23 G9J 601 D 1 
HETATM 24 C C24 G9J . B . L 2 -68.731 16.944 -81.828 0.5 55.14 ? C24 G9J 601 D 1 
HETATM 25 C C25 G9J . B . L 2 -68.983 18.268 -82.14 0.5 55.59 ? C25 G9J 601 D 1 
HETATM 26 O O26 G9J . B . L 2 -68.68 16.556 -80.532 0.5 55.3 ? O26 G9J 601 D 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           26 
#