data_6DFN
#
_model_server_result.job_id            iAf1rtsRSEc3xiuYfMgYIQ 
_model_server_result.datetime_utc      '2024-11-28 10:20:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6dfn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":602}' 
#
_entry.id    6DFN 
#
_exptl.entry_id    6DFN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              489.535 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (8S)-8-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-1,8-dihydro-2H-[1]benzopyrano[4,3-d][1]benzoxepine-5,11-diol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         86.05 
_cell.angle_beta          74.92 
_cell.angle_gamma         63.34 
_cell.entry_id            6DFN 
_cell.length_a            53.089 
_cell.length_b            59.134 
_cell.length_c            94.18 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DFN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,O,P 1 1 
C,D,K,L,M,N,Q,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 M N N 
#
_chem_comp.formula           'C29 H28 F N O5' 
_chem_comp.formula_weight    489.535 
_chem_comp.id                G91 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (8S)-8-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-1,8-dihydro-2H-[1]benzopyrano[4,3-d][1]benzoxepine-5,11-diol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C17 C16 G91 doub 83 n y 
C17 C18 G91 sing 84 n y 
O20 C18 G91 sing 85 n n 
C16 C15 G91 sing 86 n y 
C18 C19 G91 doub 87 n y 
C15 C9 G91 sing 88 n n 
C15 C14 G91 doub 89 n y 
C19 C14 G91 sing 90 n y 
C7 C9 G91 sing 91 n n 
C7 O27 G91 sing 92 n n 
C7 C6 G91 sing 93 n n 
C9 C10 G91 doub 94 n n 
C14 O13 G91 sing 95 n n 
C5 C6 G91 doub 96 n y 
C5 C4 G91 sing 97 n y 
O27 C26 G91 sing 98 n n 
C6 C1 G91 sing 99 n y 
C10 C11 G91 sing 100 n n 
C10 C21 G91 sing 101 n n 
C11 C12 G91 sing 102 n n 
C4 C3 G91 doub 103 n y 
C26 C21 G91 doub 104 n y 
C26 C25 G91 sing 105 n y 
C21 C22 G91 sing 106 n y 
O13 C12 G91 sing 107 n n 
C1 C2 G91 doub 108 n y 
C25 C24 G91 doub 109 n y 
C3 C2 G91 sing 110 n y 
C3 O29 G91 sing 111 n n 
C22 C23 G91 doub 112 n y 
C30 O29 G91 sing 113 n n 
C30 C31 G91 sing 114 n n 
C24 C23 G91 sing 115 n y 
C24 O28 G91 sing 116 n n 
C31 N32 G91 sing 117 n n 
N32 C33 G91 sing 118 n n 
N32 C35 G91 sing 119 n n 
C33 C34 G91 sing 120 n n 
C36 F37 G91 sing 121 n n 
C36 C34 G91 sing 122 n n 
C35 C34 G91 sing 123 n n 
C4 H1 G91 sing 124 n n 
C5 H2 G91 sing 125 n n 
C11 H3 G91 sing 126 n n 
C11 H4 G91 sing 127 n n 
C7 H5 G91 sing 128 n n 
C12 H6 G91 sing 129 n n 
C12 H7 G91 sing 130 n n 
C1 H8 G91 sing 131 n n 
C2 H9 G91 sing 132 n n 
C16 H10 G91 sing 133 n n 
C17 H11 G91 sing 134 n n 
C19 H12 G91 sing 135 n n 
O20 H13 G91 sing 136 n n 
C22 H14 G91 sing 137 n n 
C23 H15 G91 sing 138 n n 
C25 H16 G91 sing 139 n n 
O28 H17 G91 sing 140 n n 
C30 H18 G91 sing 141 n n 
C30 H19 G91 sing 142 n n 
C31 H20 G91 sing 143 n n 
C31 H21 G91 sing 144 n n 
C33 H23 G91 sing 145 n n 
C33 H24 G91 sing 146 n n 
C34 H25 G91 sing 147 n n 
C35 H26 G91 sing 148 n n 
C35 H27 G91 sing 149 n n 
C36 H28 G91 sing 150 n n 
C36 H29 G91 sing 151 n n 
#
_atom_sites.entry_id                     6DFN 
_atom_sites.fract_transf_matrix[1][1]    0.018836 
_atom_sites.fract_transf_matrix[1][2]    -0.009456 
_atom_sites.fract_transf_matrix[1][3]    -0.005607 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018922 
_atom_sites.fract_transf_matrix[2][3]    0.00105 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011013 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 G9J A 1 601 1 G9J RRG . 
F 3 NI A 1 602 1 NI NI . 
G 4 G91 B 1 601 1 G91 DRG . 
H 2 G9J B 1 602 1 G9J RRG . 
I 5 GOL B 1 603 2 GOL GOL . 
J 5 GOL B 1 604 3 GOL GOL . 
K 2 G9J C 1 601 2 G9J RRG . 
L 2 G9J D 1 601 3 G9J RRG . 
M 4 G91 D 1 602 2 G91 DRG . 
N 5 GOL D 1 603 1 GOL GOL . 
O 6 HOH A 1 701 8 HOH HOH . 
O 6 HOH A 2 702 31 HOH HOH . 
O 6 HOH A 3 703 27 HOH HOH . 
O 6 HOH A 4 704 10 HOH HOH . 
O 6 HOH A 5 705 34 HOH HOH . 
O 6 HOH A 6 706 4 HOH HOH . 
O 6 HOH A 7 707 7 HOH HOH . 
O 6 HOH A 8 708 25 HOH HOH . 
O 6 HOH A 9 709 35 HOH HOH . 
O 6 HOH A 10 710 6 HOH HOH . 
O 6 HOH A 11 711 2 HOH HOH . 
O 6 HOH A 12 712 33 HOH HOH . 
O 6 HOH A 13 713 45 HOH HOH . 
O 6 HOH A 14 714 5 HOH HOH . 
O 6 HOH A 15 715 36 HOH HOH . 
O 6 HOH A 16 716 44 HOH HOH . 
P 6 HOH B 1 701 29 HOH HOH . 
P 6 HOH B 2 702 23 HOH HOH . 
P 6 HOH B 3 703 12 HOH HOH . 
P 6 HOH B 4 704 24 HOH HOH . 
P 6 HOH B 5 705 1 HOH HOH . 
P 6 HOH B 6 706 28 HOH HOH . 
P 6 HOH B 7 707 9 HOH HOH . 
P 6 HOH B 8 708 30 HOH HOH . 
P 6 HOH B 9 709 11 HOH HOH . 
Q 6 HOH C 1 701 14 HOH HOH . 
Q 6 HOH C 2 702 43 HOH HOH . 
Q 6 HOH C 3 703 47 HOH HOH . 
Q 6 HOH C 4 704 46 HOH HOH . 
Q 6 HOH C 5 705 13 HOH HOH . 
Q 6 HOH C 6 706 42 HOH HOH . 
Q 6 HOH C 7 707 37 HOH HOH . 
Q 6 HOH C 8 708 26 HOH HOH . 
Q 6 HOH C 9 709 16 HOH HOH . 
Q 6 HOH C 10 710 17 HOH HOH . 
R 6 HOH D 1 701 39 HOH HOH . 
R 6 HOH D 2 702 40 HOH HOH . 
R 6 HOH D 3 703 21 HOH HOH . 
R 6 HOH D 4 704 19 HOH HOH . 
R 6 HOH D 5 705 41 HOH HOH . 
R 6 HOH D 6 706 18 HOH HOH . 
R 6 HOH D 7 707 38 HOH HOH . 
R 6 HOH D 8 708 20 HOH HOH . 
R 6 HOH D 9 709 22 HOH HOH . 
R 6 HOH D 10 710 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 G91 . A . M 4 -74.173 19.929 -84.633 0.5 60.87 ? C4 G91 602 D 1 
HETATM 2 C C14 G91 . A . M 4 -67.947 18.861 -82.647 0.5 61.69 ? C14 G91 602 D 1 
HETATM 3 C C5 G91 . A . M 4 -73.149 20.438 -83.855 0.5 60.46 ? C5 G91 602 D 1 
HETATM 4 C C6 G91 . A . M 4 -71.857 20.536 -84.349 0.5 60.24 ? C6 G91 602 D 1 
HETATM 5 C C11 G91 . A . M 4 -67.443 20.049 -85.179 0.5 61.28 ? C11 G91 602 D 1 
HETATM 6 C C7 G91 . A . M 4 -70.746 21.147 -83.527 0.5 59.17 ? C7 G91 602 D 1 
HETATM 7 C C9 G91 . A . M 4 -69.499 20.38 -83.881 0.5 59.92 ? C9 G91 602 D 1 
HETATM 8 C C10 G91 . A . M 4 -68.646 20.867 -84.798 0.5 59.71 ? C10 G91 602 D 1 
HETATM 9 C C12 G91 . A . M 4 -66.375 19.896 -84.119 0.5 61.8 ? C12 G91 602 D 1 
HETATM 10 C C3 G91 . A . M 4 -73.911 19.519 -85.93 0.5 60.75 ? C3 G91 602 D 1 
HETATM 11 C C1 G91 . A . M 4 -71.607 20.086 -85.633 0.5 59.95 ? C1 G91 602 D 1 
HETATM 12 C C2 G91 . A . M 4 -72.62 19.577 -86.422 0.5 60.19 ? C2 G91 602 D 1 
HETATM 13 O O13 G91 . A . M 4 -66.901 19.748 -82.786 0.5 61.75 ? O13 G91 602 D 1 
HETATM 14 C C15 G91 . A . M 4 -69.202 19.104 -83.196 0.5 60.92 ? C15 G91 602 D 1 
HETATM 15 C C16 G91 . A . M 4 -70.179 18.123 -83.058 0.5 60.88 ? C16 G91 602 D 1 
HETATM 16 C C17 G91 . A . M 4 -69.906 16.944 -82.392 0.5 61.49 ? C17 G91 602 D 1 
HETATM 17 C C18 G91 . A . M 4 -68.651 16.733 -81.843 0.5 61.48 ? C18 G91 602 D 1 
HETATM 18 C C19 G91 . A . M 4 -67.664 17.699 -81.962 0.5 62.26 ? C19 G91 602 D 1 
HETATM 19 O O20 G91 . A . M 4 -68.386 15.572 -81.184 0.5 60.72 ? O20 G91 602 D 1 
HETATM 20 C C21 G91 . A . M 4 -68.911 22.16 -85.431 0.5 58.95 ? C21 G91 602 D 1 
HETATM 21 C C22 G91 . A . M 4 -68.152 22.676 -86.479 0.5 58.81 ? C22 G91 602 D 1 
HETATM 22 C C23 G91 . A . M 4 -68.459 23.899 -87.043 0.5 58.72 ? C23 G91 602 D 1 
HETATM 23 C C24 G91 . A . M 4 -69.535 24.632 -86.564 0.5 58.56 ? C24 G91 602 D 1 
HETATM 24 C C25 G91 . A . M 4 -70.299 24.149 -85.511 0.5 58.03 ? C25 G91 602 D 1 
HETATM 25 C C26 G91 . A . M 4 -69.972 22.93 -84.948 0.5 58.78 ? C26 G91 602 D 1 
HETATM 26 O O27 G91 . A . M 4 -70.698 22.562 -83.84 0.5 58.33 ? O27 G91 602 D 1 
HETATM 27 O O28 G91 . A . M 4 -69.84 25.838 -87.124 0.5 57.21 ? O28 G91 602 D 1 
HETATM 28 O O29 G91 . A . M 4 -74.853 19.104 -86.837 0.5 62.43 ? O29 G91 602 D 1 
HETATM 29 C C30 G91 . A . M 4 -76.222 19.02 -86.418 0.5 65.55 ? C30 G91 602 D 1 
HETATM 30 C C31 G91 . A . M 4 -77.026 18.543 -87.606 0.5 66.73 ? C31 G91 602 D 1 
HETATM 31 N N32 G91 . A . M 4 -78.307 17.919 -87.245 0.5 67.76 ? N32 G91 602 D 1 
HETATM 32 C C33 G91 . A . M 4 -79.463 18.2 -88.146 0.5 69.35 ? C33 G91 602 D 1 
HETATM 33 C C34 G91 . A . M 4 -80.381 18.237 -86.894 0.5 69.37 ? C34 G91 602 D 1 
HETATM 34 C C35 G91 . A . M 4 -79.068 18.527 -86.118 0.5 68.57 ? C35 G91 602 D 1 
HETATM 35 C C36 G91 . A . M 4 -81.395 19.386 -86.922 0.5 69.85 ? C36 G91 602 D 1 
HETATM 36 F F37 G91 . A . M 4 -82.685 18.876 -86.768 0.5 70.4 ? F37 G91 602 D 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           36 
#