data_6DHA # _model_server_result.job_id hQShVF0B7ao2i78fYhU22g _model_server_result.datetime_utc '2025-01-10 15:47:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dha # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6DHA # _exptl.entry_id 6DHA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 372.438 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Hydroxy Pioglitazone (M-IV)' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.73 _cell.angle_gamma 90 _cell.entry_id 6DHA _cell.length_a 93.08 _cell.length_b 61.85 _cell.length_c 119.67 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DHA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C19 H20 N2 O4 S' _chem_comp.formula_weight 372.438 _chem_comp.id GFV _chem_comp.mon_nstd_flag . _chem_comp.name 'Hydroxy Pioglitazone (M-IV)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (5S)-5-{[4-(2-{5-[(1S)-1-hydroxyethyl]pyridin-2-yl}ethoxy)phenyl]methyl}-1,3-thiazolidine-2,4-dione # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O26 C02 GFV sing 83 n n C02 C03 GFV sing 84 n n C02 C01 GFV sing 85 n n C08 C03 GFV doub 86 n y C08 C07 GFV sing 87 n y C03 C04 GFV sing 88 n y C07 C06 GFV doub 89 n y C04 N05 GFV doub 90 n y C06 N05 GFV sing 91 n y C06 C09 GFV sing 92 n n C09 C10 GFV sing 93 n n C10 O11 GFV sing 94 n n O11 C12 GFV sing 95 n n C12 C13 GFV doub 96 n y C12 C17 GFV sing 97 n y C13 C14 GFV sing 98 n y C17 C16 GFV doub 99 n y C14 C15 GFV doub 100 n y C16 C15 GFV sing 101 n y C15 C18 GFV sing 102 n n S25 C19 GFV sing 103 n n S25 C23 GFV sing 104 n n C18 C19 GFV sing 105 n n C19 C20 GFV sing 106 n n C23 O24 GFV doub 107 n n C23 N22 GFV sing 108 n n C20 N22 GFV sing 109 n n C20 O21 GFV doub 110 n n C10 H1 GFV sing 111 n n C10 H2 GFV sing 112 n n C13 H3 GFV sing 113 n n C17 H4 GFV sing 114 n n C01 H5 GFV sing 115 n n C01 H6 GFV sing 116 n n C01 H7 GFV sing 117 n n C02 H8 GFV sing 118 n n C04 H9 GFV sing 119 n n C07 H10 GFV sing 120 n n C08 H11 GFV sing 121 n n C09 H12 GFV sing 122 n n C09 H13 GFV sing 123 n n C14 H14 GFV sing 124 n n C16 H15 GFV sing 125 n n C18 H16 GFV sing 126 n n C18 H17 GFV sing 127 n n C19 H18 GFV sing 128 n n N22 H19 GFV sing 129 n n O26 H20 GFV sing 130 n n # _atom_sites.entry_id 6DHA _atom_sites.fract_transf_matrix[1][1] 0.010743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002427 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GFV A 1 501 501 GFV GFV . D 3 KNA A 1 502 502 KNA KNA . E 3 KNA A 1 503 503 KNA KNA . F 2 GFV B 1 501 501 GFV GFV . G 4 HOH A 1 601 601 HOH HOH . G 4 HOH A 2 602 602 HOH HOH . G 4 HOH A 3 603 603 HOH HOH . G 4 HOH A 4 604 604 HOH HOH . G 4 HOH A 5 605 605 HOH HOH . G 4 HOH A 6 606 606 HOH HOH . G 4 HOH A 7 607 607 HOH HOH . G 4 HOH A 8 608 608 HOH HOH . G 4 HOH A 9 609 609 HOH HOH . G 4 HOH A 10 610 610 HOH HOH . G 4 HOH A 11 611 611 HOH HOH . G 4 HOH A 12 612 612 HOH HOH . G 4 HOH A 13 613 613 HOH HOH . G 4 HOH A 14 614 614 HOH HOH . G 4 HOH A 15 615 615 HOH HOH . G 4 HOH A 16 616 616 HOH HOH . G 4 HOH A 17 617 617 HOH HOH . G 4 HOH A 18 618 618 HOH HOH . G 4 HOH A 19 619 619 HOH HOH . G 4 HOH A 20 620 620 HOH HOH . G 4 HOH A 21 621 621 HOH HOH . G 4 HOH A 22 622 622 HOH HOH . G 4 HOH A 23 623 623 HOH HOH . G 4 HOH A 24 624 624 HOH HOH . G 4 HOH A 25 625 625 HOH HOH . G 4 HOH A 26 626 626 HOH HOH . G 4 HOH A 27 627 627 HOH HOH . G 4 HOH A 28 628 727 HOH HOH . G 4 HOH A 29 629 628 HOH HOH . G 4 HOH A 30 630 629 HOH HOH . G 4 HOH A 31 631 630 HOH HOH . G 4 HOH A 32 632 631 HOH HOH . G 4 HOH A 33 633 632 HOH HOH . G 4 HOH A 34 634 633 HOH HOH . G 4 HOH A 35 635 634 HOH HOH . G 4 HOH A 36 636 635 HOH HOH . G 4 HOH A 37 637 636 HOH HOH . G 4 HOH A 38 638 637 HOH HOH . G 4 HOH A 39 639 638 HOH HOH . G 4 HOH A 40 640 639 HOH HOH . G 4 HOH A 41 641 640 HOH HOH . G 4 HOH A 42 642 641 HOH HOH . G 4 HOH A 43 643 642 HOH HOH . G 4 HOH A 44 644 643 HOH HOH . G 4 HOH A 45 645 644 HOH HOH . G 4 HOH A 46 646 645 HOH HOH . G 4 HOH A 47 647 646 HOH HOH . G 4 HOH A 48 648 647 HOH HOH . G 4 HOH A 49 649 648 HOH HOH . G 4 HOH A 50 650 649 HOH HOH . G 4 HOH A 51 651 650 HOH HOH . G 4 HOH A 52 652 651 HOH HOH . G 4 HOH A 53 653 652 HOH HOH . G 4 HOH A 54 654 653 HOH HOH . G 4 HOH A 55 655 654 HOH HOH . G 4 HOH A 56 656 655 HOH HOH . G 4 HOH A 57 657 656 HOH HOH . G 4 HOH A 58 658 657 HOH HOH . G 4 HOH A 59 659 658 HOH HOH . G 4 HOH A 60 660 659 HOH HOH . G 4 HOH A 61 661 660 HOH HOH . G 4 HOH A 62 662 661 HOH HOH . G 4 HOH A 63 663 662 HOH HOH . G 4 HOH A 64 664 663 HOH HOH . G 4 HOH A 65 665 664 HOH HOH . G 4 HOH A 66 666 665 HOH HOH . G 4 HOH A 67 667 666 HOH HOH . G 4 HOH A 68 668 667 HOH HOH . G 4 HOH A 69 669 668 HOH HOH . G 4 HOH A 70 670 669 HOH HOH . G 4 HOH A 71 671 670 HOH HOH . G 4 HOH A 72 672 671 HOH HOH . G 4 HOH A 73 673 672 HOH HOH . G 4 HOH A 74 674 673 HOH HOH . G 4 HOH A 75 675 674 HOH HOH . G 4 HOH A 76 676 675 HOH HOH . G 4 HOH A 77 677 676 HOH HOH . G 4 HOH A 78 678 677 HOH HOH . G 4 HOH A 79 679 678 HOH HOH . G 4 HOH A 80 680 679 HOH HOH . G 4 HOH A 81 681 680 HOH HOH . G 4 HOH A 82 682 681 HOH HOH . G 4 HOH A 83 683 682 HOH HOH . G 4 HOH A 84 684 683 HOH HOH . G 4 HOH A 85 685 684 HOH HOH . G 4 HOH A 86 686 685 HOH HOH . G 4 HOH A 87 687 686 HOH HOH . G 4 HOH A 88 688 687 HOH HOH . G 4 HOH A 89 689 688 HOH HOH . G 4 HOH A 90 690 689 HOH HOH . G 4 HOH A 91 691 690 HOH HOH . G 4 HOH A 92 692 726 HOH HOH . G 4 HOH A 93 693 691 HOH HOH . G 4 HOH A 94 694 692 HOH HOH . G 4 HOH A 95 695 693 HOH HOH . G 4 HOH A 96 696 694 HOH HOH . G 4 HOH A 97 697 695 HOH HOH . G 4 HOH A 98 698 696 HOH HOH . G 4 HOH A 99 699 697 HOH HOH . G 4 HOH A 100 700 698 HOH HOH . G 4 HOH A 101 701 699 HOH HOH . G 4 HOH A 102 702 700 HOH HOH . G 4 HOH A 103 703 701 HOH HOH . G 4 HOH A 104 704 702 HOH HOH . G 4 HOH A 105 705 703 HOH HOH . G 4 HOH A 106 706 704 HOH HOH . G 4 HOH A 107 707 705 HOH HOH . G 4 HOH A 108 708 706 HOH HOH . G 4 HOH A 109 709 707 HOH HOH . G 4 HOH A 110 710 708 HOH HOH . G 4 HOH A 111 711 709 HOH HOH . G 4 HOH A 112 712 710 HOH HOH . G 4 HOH A 113 713 711 HOH HOH . G 4 HOH A 114 714 712 HOH HOH . G 4 HOH A 115 715 713 HOH HOH . G 4 HOH A 116 716 714 HOH HOH . G 4 HOH A 117 717 715 HOH HOH . G 4 HOH A 118 718 716 HOH HOH . G 4 HOH A 119 719 717 HOH HOH . G 4 HOH A 120 720 718 HOH HOH . G 4 HOH A 121 721 719 HOH HOH . G 4 HOH A 122 722 720 HOH HOH . G 4 HOH A 123 723 721 HOH HOH . G 4 HOH A 124 724 722 HOH HOH . G 4 HOH A 125 725 723 HOH HOH . G 4 HOH A 126 726 724 HOH HOH . G 4 HOH A 127 727 725 HOH HOH . H 4 HOH B 1 601 601 HOH HOH . H 4 HOH B 2 602 602 HOH HOH . H 4 HOH B 3 603 603 HOH HOH . H 4 HOH B 4 604 604 HOH HOH . H 4 HOH B 5 605 605 HOH HOH . H 4 HOH B 6 606 606 HOH HOH . H 4 HOH B 7 607 607 HOH HOH . H 4 HOH B 8 608 608 HOH HOH . H 4 HOH B 9 609 609 HOH HOH . H 4 HOH B 10 610 610 HOH HOH . H 4 HOH B 11 611 611 HOH HOH . H 4 HOH B 12 612 612 HOH HOH . H 4 HOH B 13 613 613 HOH HOH . H 4 HOH B 14 614 614 HOH HOH . H 4 HOH B 15 615 615 HOH HOH . H 4 HOH B 16 616 616 HOH HOH . H 4 HOH B 17 617 617 HOH HOH . H 4 HOH B 18 618 618 HOH HOH . H 4 HOH B 19 619 619 HOH HOH . H 4 HOH B 20 620 620 HOH HOH . H 4 HOH B 21 621 621 HOH HOH . H 4 HOH B 22 622 622 HOH HOH . H 4 HOH B 23 623 623 HOH HOH . H 4 HOH B 24 624 624 HOH HOH . H 4 HOH B 25 625 625 HOH HOH . H 4 HOH B 26 626 626 HOH HOH . H 4 HOH B 27 627 627 HOH HOH . H 4 HOH B 28 628 628 HOH HOH . H 4 HOH B 29 629 629 HOH HOH . H 4 HOH B 30 630 630 HOH HOH . H 4 HOH B 31 631 631 HOH HOH . H 4 HOH B 32 632 632 HOH HOH . H 4 HOH B 33 633 633 HOH HOH . H 4 HOH B 34 634 634 HOH HOH . H 4 HOH B 35 635 635 HOH HOH . H 4 HOH B 36 636 636 HOH HOH . H 4 HOH B 37 637 637 HOH HOH . H 4 HOH B 38 638 638 HOH HOH . H 4 HOH B 39 639 639 HOH HOH . H 4 HOH B 40 640 640 HOH HOH . H 4 HOH B 41 641 641 HOH HOH . H 4 HOH B 42 642 642 HOH HOH . H 4 HOH B 43 643 643 HOH HOH . H 4 HOH B 44 644 644 HOH HOH . H 4 HOH B 45 645 645 HOH HOH . H 4 HOH B 46 646 646 HOH HOH . H 4 HOH B 47 647 647 HOH HOH . H 4 HOH B 48 648 648 HOH HOH . H 4 HOH B 49 649 649 HOH HOH . H 4 HOH B 50 650 650 HOH HOH . H 4 HOH B 51 651 651 HOH HOH . H 4 HOH B 52 652 652 HOH HOH . H 4 HOH B 53 653 653 HOH HOH . H 4 HOH B 54 654 654 HOH HOH . H 4 HOH B 55 655 655 HOH HOH . H 4 HOH B 56 656 656 HOH HOH . H 4 HOH B 57 657 657 HOH HOH . H 4 HOH B 58 658 658 HOH HOH . H 4 HOH B 59 659 659 HOH HOH . H 4 HOH B 60 660 660 HOH HOH . H 4 HOH B 61 661 661 HOH HOH . H 4 HOH B 62 662 662 HOH HOH . H 4 HOH B 63 663 663 HOH HOH . H 4 HOH B 64 664 664 HOH HOH . H 4 HOH B 65 665 665 HOH HOH . H 4 HOH B 66 666 666 HOH HOH . H 4 HOH B 67 667 667 HOH HOH . H 4 HOH B 68 668 668 HOH HOH . H 4 HOH B 69 669 669 HOH HOH . H 4 HOH B 70 670 670 HOH HOH . H 4 HOH B 71 671 671 HOH HOH . H 4 HOH B 72 672 672 HOH HOH . H 4 HOH B 73 673 673 HOH HOH . H 4 HOH B 74 674 674 HOH HOH . H 4 HOH B 75 675 675 HOH HOH . H 4 HOH B 76 676 676 HOH HOH . H 4 HOH B 77 677 677 HOH HOH . H 4 HOH B 78 678 678 HOH HOH . H 4 HOH B 79 679 679 HOH HOH . H 4 HOH B 80 680 680 HOH HOH . H 4 HOH B 81 681 681 HOH HOH . H 4 HOH B 82 682 682 HOH HOH . H 4 HOH B 83 683 683 HOH HOH . H 4 HOH B 84 684 684 HOH HOH . H 4 HOH B 85 685 685 HOH HOH . H 4 HOH B 86 686 686 HOH HOH . H 4 HOH B 87 687 687 HOH HOH . H 4 HOH B 88 688 688 HOH HOH . H 4 HOH B 89 689 689 HOH HOH . H 4 HOH B 90 690 690 HOH HOH . H 4 HOH B 91 691 691 HOH HOH . H 4 HOH B 92 692 692 HOH HOH . H 4 HOH B 93 693 693 HOH HOH . H 4 HOH B 94 694 694 HOH HOH . H 4 HOH B 95 695 695 HOH HOH . H 4 HOH B 96 696 696 HOH HOH . H 4 HOH B 97 697 697 HOH HOH . H 4 HOH B 98 698 698 HOH HOH . H 4 HOH B 99 699 699 HOH HOH . H 4 HOH B 100 700 700 HOH HOH . H 4 HOH B 101 701 701 HOH HOH . H 4 HOH B 102 702 702 HOH HOH . H 4 HOH B 103 703 703 HOH HOH . H 4 HOH B 104 704 704 HOH HOH . H 4 HOH B 105 705 705 HOH HOH . H 4 HOH B 106 706 706 HOH HOH . H 4 HOH B 107 707 707 HOH HOH . H 4 HOH B 108 708 708 HOH HOH . H 4 HOH B 109 709 709 HOH HOH . H 4 HOH B 110 710 710 HOH HOH . H 4 HOH B 111 711 711 HOH HOH . H 4 HOH B 112 712 712 HOH HOH . H 4 HOH B 113 713 713 HOH HOH . H 4 HOH B 114 714 714 HOH HOH . H 4 HOH B 115 715 715 HOH HOH . H 4 HOH B 116 716 716 HOH HOH . H 4 HOH B 117 717 717 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 GFV . . . C 2 16.454 61.763 11.539 1 30 ? C10 GFV 501 A 1 HETATM 2 C C13 GFV . . . C 2 19.177 61.545 13.945 1 30 ? C13 GFV 501 A 1 HETATM 3 C C15 GFV . . . C 2 18.246 61.767 16.134 1 30 ? C15 GFV 501 A 1 HETATM 4 C C17 GFV . . . C 2 16.801 61.842 14.219 1 30 ? C17 GFV 501 A 1 HETATM 5 C C20 GFV . . . C 2 18.462 63.348 19.672 1 30 ? C20 GFV 501 A 1 HETATM 6 C C01 GFV . . . C 2 18.337 68.233 9.644 1 30 ? C01 GFV 501 A 1 HETATM 7 C C02 GFV . . . C 2 18.519 67.255 8.499 1 30 ? C02 GFV 501 A 1 HETATM 8 C C03 GFV . . . C 2 18.043 65.819 8.855 1 30 ? C03 GFV 501 A 1 HETATM 9 C C04 GFV . . . C 2 16.727 65.626 9.444 1 30 ? C04 GFV 501 A 1 HETATM 10 C C06 GFV . . . C 2 17.072 63.325 9.533 1 30 ? C06 GFV 501 A 1 HETATM 11 C C07 GFV . . . C 2 18.367 63.429 8.965 1 30 ? C07 GFV 501 A 1 HETATM 12 C C08 GFV . . . C 2 18.854 64.725 8.619 1 30 ? C08 GFV 501 A 1 HETATM 13 C C09 GFV . . . C 2 16.524 61.948 9.91 1 30 ? C09 GFV 501 A 1 HETATM 14 C C12 GFV . . . C 2 17.895 61.669 13.401 1 30 ? C12 GFV 501 A 1 HETATM 15 C C14 GFV . . . C 2 19.345 61.592 15.308 1 30 ? C14 GFV 501 A 1 HETATM 16 C C16 GFV . . . C 2 16.969 61.893 15.591 1 30 ? C16 GFV 501 A 1 HETATM 17 C C18 GFV . . . C 2 18.445 61.828 17.685 1 30 ? C18 GFV 501 A 1 HETATM 18 C C19 GFV . . . C 2 18.525 63.269 18.11 1 30 ? C19 GFV 501 A 1 HETATM 19 C C23 GFV . . . C 2 20.544 64.709 19.03 1 30 ? C23 GFV 501 A 1 HETATM 20 N N05 GFV . . . C 2 16.308 64.412 9.751 1 30 ? N05 GFV 501 A 1 HETATM 21 N N22 GFV . . . C 2 19.723 64.247 20.214 1 30 ? N22 GFV 501 A 1 HETATM 22 O O11 GFV . . . C 2 17.734 61.615 11.967 1 30 ? O11 GFV 501 A 1 HETATM 23 O O21 GFV . . . C 2 17.634 62.842 20.354 1 30 ? O21 GFV 501 A 1 HETATM 24 O O24 GFV . . . C 2 21.403 65.449 19.057 1 30 ? O24 GFV 501 A 1 HETATM 25 O O26 GFV . . . C 2 17.711 67.716 7.404 1 30 ? O26 GFV 501 A 1 HETATM 26 S S25 GFV . . . C 2 19.939 63.924 17.653 1 30 ? S25 GFV 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #