data_6DI7
#
_model_server_result.job_id            WCv6qFcPLJmtzaA6bLX63A 
_model_server_result.datetime_utc      '2024-10-10 07:18:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6di7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1002}' 
#
_entry.id    6DI7 
#
_exptl.entry_id    6DI7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6DI7 
_cell.length_a            84.979 
_cell.length_b            84.979 
_cell.length_c            271.502 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DI7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 77 A SER 57 1_555 C MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc2 A OG1 THR 97 A THR 77 1_555 C MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc3 B O3B GDP . A GDP 1001 1_555 C MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc4 C MG MG . A MG 1002 1_555 D O HOH . A HOH 1131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6DI7 
_atom_sites.fract_transf_matrix[1][1]    0.011768 
_atom_sites.fract_transf_matrix[1][2]    0.006794 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013588 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003683 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GDP A 1 1001 1001 GDP GDP . 
C 3 MG A 1 1002 1002 MG MG . 
D 4 HOH A 1 1101 58 HOH HOH . 
D 4 HOH A 2 1102 26 HOH HOH . 
D 4 HOH A 3 1103 11 HOH HOH . 
D 4 HOH A 4 1104 68 HOH HOH . 
D 4 HOH A 5 1105 44 HOH HOH . 
D 4 HOH A 6 1106 59 HOH HOH . 
D 4 HOH A 7 1107 7 HOH HOH . 
D 4 HOH A 8 1108 32 HOH HOH . 
D 4 HOH A 9 1109 77 HOH HOH . 
D 4 HOH A 10 1110 47 HOH HOH . 
D 4 HOH A 11 1111 2 HOH HOH . 
D 4 HOH A 12 1112 30 HOH HOH . 
D 4 HOH A 13 1113 40 HOH HOH . 
D 4 HOH A 14 1114 15 HOH HOH . 
D 4 HOH A 15 1115 45 HOH HOH . 
D 4 HOH A 16 1116 1 HOH HOH . 
D 4 HOH A 17 1117 66 HOH HOH . 
D 4 HOH A 18 1118 8 HOH HOH . 
D 4 HOH A 19 1119 5 HOH HOH . 
D 4 HOH A 20 1120 56 HOH HOH . 
D 4 HOH A 21 1121 54 HOH HOH . 
D 4 HOH A 22 1122 23 HOH HOH . 
D 4 HOH A 23 1123 74 HOH HOH . 
D 4 HOH A 24 1124 9 HOH HOH . 
D 4 HOH A 25 1125 38 HOH HOH . 
D 4 HOH A 26 1126 13 HOH HOH . 
D 4 HOH A 27 1127 62 HOH HOH . 
D 4 HOH A 28 1128 22 HOH HOH . 
D 4 HOH A 29 1129 70 HOH HOH . 
D 4 HOH A 30 1130 36 HOH HOH . 
D 4 HOH A 31 1131 53 HOH HOH . 
D 4 HOH A 32 1132 35 HOH HOH . 
D 4 HOH A 33 1133 12 HOH HOH . 
D 4 HOH A 34 1134 3 HOH HOH . 
D 4 HOH A 35 1135 18 HOH HOH . 
D 4 HOH A 36 1136 57 HOH HOH . 
D 4 HOH A 37 1137 41 HOH HOH . 
D 4 HOH A 38 1138 76 HOH HOH . 
D 4 HOH A 39 1139 43 HOH HOH . 
D 4 HOH A 40 1140 51 HOH HOH . 
D 4 HOH A 41 1141 60 HOH HOH . 
D 4 HOH A 42 1142 10 HOH HOH . 
D 4 HOH A 43 1143 34 HOH HOH . 
D 4 HOH A 44 1144 14 HOH HOH . 
D 4 HOH A 45 1145 6 HOH HOH . 
D 4 HOH A 46 1146 4 HOH HOH . 
D 4 HOH A 47 1147 21 HOH HOH . 
D 4 HOH A 48 1148 33 HOH HOH . 
D 4 HOH A 49 1149 25 HOH HOH . 
D 4 HOH A 50 1150 20 HOH HOH . 
D 4 HOH A 51 1151 72 HOH HOH . 
D 4 HOH A 52 1152 64 HOH HOH . 
D 4 HOH A 53 1153 28 HOH HOH . 
D 4 HOH A 54 1154 61 HOH HOH . 
D 4 HOH A 55 1155 37 HOH HOH . 
D 4 HOH A 56 1156 69 HOH HOH . 
D 4 HOH A 57 1157 65 HOH HOH . 
D 4 HOH A 58 1158 52 HOH HOH . 
D 4 HOH A 59 1159 78 HOH HOH . 
D 4 HOH A 60 1160 24 HOH HOH . 
D 4 HOH A 61 1161 83 HOH HOH . 
D 4 HOH A 62 1162 46 HOH HOH . 
D 4 HOH A 63 1163 17 HOH HOH . 
D 4 HOH A 64 1164 55 HOH HOH . 
D 4 HOH A 65 1165 86 HOH HOH . 
D 4 HOH A 66 1166 29 HOH HOH . 
D 4 HOH A 67 1167 85 HOH HOH . 
D 4 HOH A 68 1168 80 HOH HOH . 
D 4 HOH A 69 1169 84 HOH HOH . 
D 4 HOH A 70 1170 63 HOH HOH . 
D 4 HOH A 71 1171 19 HOH HOH . 
D 4 HOH A 72 1172 82 HOH HOH . 
D 4 HOH A 73 1173 39 HOH HOH . 
D 4 HOH A 74 1174 42 HOH HOH . 
D 4 HOH A 75 1175 81 HOH HOH . 
D 4 HOH A 76 1176 27 HOH HOH . 
D 4 HOH A 77 1177 67 HOH HOH . 
D 4 HOH A 78 1178 49 HOH HOH . 
D 4 HOH A 79 1179 73 HOH HOH . 
D 4 HOH A 80 1180 16 HOH HOH . 
D 4 HOH A 81 1181 48 HOH HOH . 
D 4 HOH A 82 1182 31 HOH HOH . 
D 4 HOH A 83 1183 50 HOH HOH . 
D 4 HOH A 84 1184 79 HOH HOH . 
D 4 HOH A 85 1185 71 HOH HOH . 
D 4 HOH A 86 1186 75 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               3.443 
_atom_site.Cartn_y               18.861 
_atom_site.Cartn_z               104.713 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        55.85 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1002 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#