data_6DIL # _model_server_result.job_id ROqvdhxH9ncGfZhoxKexaQ _model_server_result.datetime_utc '2024-11-04 22:44:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 6DIL # _exptl.entry_id 6DIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DIL _cell.length_a 58.604 _cell.length_b 86.403 _cell.length_c 46.156 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 60 A ASP 60 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc2 C NA NA . A NA 501 1_555 K O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc3 C NA NA . A NA 501 1_555 K O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc4 C NA NA . A NA 501 1_555 K O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc5 C NA NA . A NA 501 1_555 K O HOH . A HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc6 C NA NA . A NA 501 1_555 K O HOH . A HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6DIL _atom_sites.fract_transf_matrix[1][1] 0.017064 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 501 501 NA NA . D 3 CL A 1 502 511 CL CL . E 4 GOL A 1 503 522 GOL GOL . F 5 ACT A 1 504 531 ACT ACT . G 6 TPV B 1 201 201 TPV TPV . H 3 CL B 1 202 512 CL CL . I 4 GOL B 1 203 521 GOL GOL . J 4 GOL B 1 204 523 GOL GOL . K 7 HOH A 1 601 1141 HOH HOH . K 7 HOH A 2 602 1096 HOH HOH . K 7 HOH A 3 603 1140 HOH HOH . K 7 HOH A 4 604 1054 HOH HOH . K 7 HOH A 5 605 1029 HOH HOH . K 7 HOH A 6 606 1059 HOH HOH . K 7 HOH A 7 607 1136 HOH HOH . K 7 HOH A 8 608 1112 HOH HOH . K 7 HOH A 9 609 1005 HOH HOH . K 7 HOH A 10 610 1056 HOH HOH . K 7 HOH A 11 611 1129 HOH HOH . K 7 HOH A 12 612 1099 HOH HOH . K 7 HOH A 13 613 1102 HOH HOH . K 7 HOH A 14 614 1011 HOH HOH . K 7 HOH A 15 615 1111 HOH HOH . K 7 HOH A 16 616 1032 HOH HOH . K 7 HOH A 17 617 1043 HOH HOH . K 7 HOH A 18 618 1030 HOH HOH . K 7 HOH A 19 619 1012 HOH HOH . K 7 HOH A 20 620 1118 HOH HOH . K 7 HOH A 21 621 1023 HOH HOH . K 7 HOH A 22 622 1046 HOH HOH . K 7 HOH A 23 623 1062 HOH HOH . K 7 HOH A 24 624 1124 HOH HOH . K 7 HOH A 25 625 1089 HOH HOH . K 7 HOH A 26 626 1125 HOH HOH . K 7 HOH A 27 627 1061 HOH HOH . K 7 HOH A 28 628 1019 HOH HOH . K 7 HOH A 29 629 1115 HOH HOH . K 7 HOH A 30 630 1028 HOH HOH . K 7 HOH A 31 631 1002 HOH HOH . K 7 HOH A 32 632 1053 HOH HOH . K 7 HOH A 33 633 1091 HOH HOH . K 7 HOH A 34 634 1128 HOH HOH . K 7 HOH A 35 635 1065 HOH HOH . K 7 HOH A 36 636 1042 HOH HOH . K 7 HOH A 37 637 1068 HOH HOH . K 7 HOH A 38 638 1073 HOH HOH . K 7 HOH A 39 639 1022 HOH HOH . K 7 HOH A 40 640 1098 HOH HOH . K 7 HOH A 41 641 1038 HOH HOH . K 7 HOH A 42 642 1009 HOH HOH . K 7 HOH A 43 643 1058 HOH HOH . K 7 HOH A 44 644 1016 HOH HOH . K 7 HOH A 45 645 1116 HOH HOH . K 7 HOH A 46 646 1087 HOH HOH . K 7 HOH A 47 647 1060 HOH HOH . K 7 HOH A 48 648 1122 HOH HOH . K 7 HOH A 49 649 1048 HOH HOH . K 7 HOH A 50 650 1101 HOH HOH . K 7 HOH A 51 651 1110 HOH HOH . K 7 HOH A 52 652 1095 HOH HOH . K 7 HOH A 53 653 1090 HOH HOH . K 7 HOH A 54 654 1088 HOH HOH . K 7 HOH A 55 655 1144 HOH HOH . K 7 HOH A 56 656 1117 HOH HOH . K 7 HOH A 57 657 1055 HOH HOH . K 7 HOH A 58 658 1092 HOH HOH . K 7 HOH A 59 659 1145 HOH HOH . K 7 HOH A 60 660 1097 HOH HOH . K 7 HOH A 61 661 1132 HOH HOH . K 7 HOH A 62 662 1146 HOH HOH . L 7 HOH B 1 301 1094 HOH HOH . L 7 HOH B 2 302 1077 HOH HOH . L 7 HOH B 3 303 1119 HOH HOH . L 7 HOH B 4 304 1070 HOH HOH . L 7 HOH B 5 305 1051 HOH HOH . L 7 HOH B 6 306 1024 HOH HOH . L 7 HOH B 7 307 1014 HOH HOH . L 7 HOH B 8 308 1075 HOH HOH . L 7 HOH B 9 309 1082 HOH HOH . L 7 HOH B 10 310 1044 HOH HOH . L 7 HOH B 11 311 1121 HOH HOH . L 7 HOH B 12 312 1113 HOH HOH . L 7 HOH B 13 313 1085 HOH HOH . L 7 HOH B 14 314 1137 HOH HOH . L 7 HOH B 15 315 1025 HOH HOH . L 7 HOH B 16 316 1021 HOH HOH . L 7 HOH B 17 317 1027 HOH HOH . L 7 HOH B 18 318 1109 HOH HOH . L 7 HOH B 19 319 1067 HOH HOH . L 7 HOH B 20 320 1086 HOH HOH . L 7 HOH B 21 321 1142 HOH HOH . L 7 HOH B 22 322 1093 HOH HOH . L 7 HOH B 23 323 1020 HOH HOH . L 7 HOH B 24 324 1083 HOH HOH . L 7 HOH B 25 325 1106 HOH HOH . L 7 HOH B 26 326 1052 HOH HOH . L 7 HOH B 27 327 1074 HOH HOH . L 7 HOH B 28 328 1018 HOH HOH . L 7 HOH B 29 329 1003 HOH HOH . L 7 HOH B 30 330 1078 HOH HOH . L 7 HOH B 31 331 1015 HOH HOH . L 7 HOH B 32 332 1130 HOH HOH . L 7 HOH B 33 333 1006 HOH HOH . L 7 HOH B 34 334 1031 HOH HOH . L 7 HOH B 35 335 1066 HOH HOH . L 7 HOH B 36 336 1127 HOH HOH . L 7 HOH B 37 337 1081 HOH HOH . L 7 HOH B 38 338 1001 HOH HOH . L 7 HOH B 39 339 1007 HOH HOH . L 7 HOH B 40 340 1026 HOH HOH . L 7 HOH B 41 341 1036 HOH HOH . L 7 HOH B 42 342 1100 HOH HOH . L 7 HOH B 43 343 1076 HOH HOH . L 7 HOH B 44 344 1033 HOH HOH . L 7 HOH B 45 345 1107 HOH HOH . L 7 HOH B 46 346 1063 HOH HOH . L 7 HOH B 47 347 1040 HOH HOH . L 7 HOH B 48 348 1041 HOH HOH . L 7 HOH B 49 349 1084 HOH HOH . L 7 HOH B 50 350 1080 HOH HOH . L 7 HOH B 51 351 1045 HOH HOH . L 7 HOH B 52 352 1049 HOH HOH . L 7 HOH B 53 353 1057 HOH HOH . L 7 HOH B 54 354 1108 HOH HOH . L 7 HOH B 55 355 1134 HOH HOH . L 7 HOH B 56 356 1047 HOH HOH . L 7 HOH B 57 357 1072 HOH HOH . L 7 HOH B 58 358 1017 HOH HOH . L 7 HOH B 59 359 1104 HOH HOH . L 7 HOH B 60 360 1034 HOH HOH . L 7 HOH B 61 361 1035 HOH HOH . L 7 HOH B 62 362 1037 HOH HOH . L 7 HOH B 63 363 1013 HOH HOH . L 7 HOH B 64 364 1008 HOH HOH . L 7 HOH B 65 365 1004 HOH HOH . L 7 HOH B 66 366 1010 HOH HOH . L 7 HOH B 67 367 1050 HOH HOH . L 7 HOH B 68 368 1079 HOH HOH . L 7 HOH B 69 369 1135 HOH HOH . L 7 HOH B 70 370 1071 HOH HOH . L 7 HOH B 71 371 1143 HOH HOH . L 7 HOH B 72 372 1069 HOH HOH . L 7 HOH B 73 373 1039 HOH HOH . L 7 HOH B 74 374 1120 HOH HOH . L 7 HOH B 75 375 1133 HOH HOH . L 7 HOH B 76 376 1064 HOH HOH . L 7 HOH B 77 377 1138 HOH HOH . L 7 HOH B 78 378 1123 HOH HOH . L 7 HOH B 79 379 1131 HOH HOH . L 7 HOH B 80 380 1103 HOH HOH . L 7 HOH B 81 381 1105 HOH HOH . L 7 HOH B 82 382 1126 HOH HOH . L 7 HOH B 83 383 1114 HOH HOH . L 7 HOH B 84 384 1139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . F 5 21.797 26.598 57.874 1 117.53 ? C ACT 504 A 1 HETATM 2 O O ACT . . . F 5 22.887 27.176 57.902 1 119.25 ? O ACT 504 A 1 HETATM 3 O OXT ACT . . . F 5 20.923 26.887 58.698 1 113.95 ? OXT ACT 504 A 1 HETATM 4 C CH3 ACT . . . F 5 21.505 25.52 56.823 1 115.02 ? CH3 ACT 504 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #