data_6DIN # _model_server_result.job_id yFuOc0Yl49t_QAUFxA_jbA _model_server_result.datetime_utc '2024-11-10 01:31:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6din # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6DIN # _exptl.entry_id 6DIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DIN _cell.length_a 58.854 _cell.length_b 58.854 _cell.length_c 160.908 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 160.908 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C GLN 112 A GLN 109 1_555 A N MSE 113 A MSE 110 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C GLN 112 A GLN 109 1_555 A N MSE 113 A MSE 110 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C MSE 113 A MSE 110 1_555 A N TRP 114 A TRP 111 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C MSE 113 A MSE 110 1_555 A N TRP 114 A TRP 111 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 6DIN _atom_sites.fract_transf_matrix[1][1] 0.016991 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016991 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 1 SO4 SO4 . C 2 SO4 A 1 202 2 SO4 SO4 . D 2 SO4 A 1 203 3 SO4 SO4 . E 2 SO4 A 1 204 4 SO4 SO4 . F 3 HOH A 1 301 65 HOH HOH . F 3 HOH A 2 302 241 HOH HOH . F 3 HOH A 3 303 247 HOH HOH . F 3 HOH A 4 304 195 HOH HOH . F 3 HOH A 5 305 130 HOH HOH . F 3 HOH A 6 306 60 HOH HOH . F 3 HOH A 7 307 91 HOH HOH . F 3 HOH A 8 308 144 HOH HOH . F 3 HOH A 9 309 89 HOH HOH . F 3 HOH A 10 310 208 HOH HOH . F 3 HOH A 11 311 168 HOH HOH . F 3 HOH A 12 312 56 HOH HOH . F 3 HOH A 13 313 113 HOH HOH . F 3 HOH A 14 314 230 HOH HOH . F 3 HOH A 15 315 188 HOH HOH . F 3 HOH A 16 316 185 HOH HOH . F 3 HOH A 17 317 69 HOH HOH . F 3 HOH A 18 318 75 HOH HOH . F 3 HOH A 19 319 13 HOH HOH . F 3 HOH A 20 320 73 HOH HOH . F 3 HOH A 21 321 212 HOH HOH . F 3 HOH A 22 322 48 HOH HOH . F 3 HOH A 23 323 77 HOH HOH . F 3 HOH A 24 324 179 HOH HOH . F 3 HOH A 25 325 46 HOH HOH . F 3 HOH A 26 326 6 HOH HOH . F 3 HOH A 27 327 19 HOH HOH . F 3 HOH A 28 328 194 HOH HOH . F 3 HOH A 29 329 242 HOH HOH . F 3 HOH A 30 330 50 HOH HOH . F 3 HOH A 31 331 16 HOH HOH . F 3 HOH A 32 332 93 HOH HOH . F 3 HOH A 33 333 7 HOH HOH . F 3 HOH A 34 334 20 HOH HOH . F 3 HOH A 35 335 96 HOH HOH . F 3 HOH A 36 336 34 HOH HOH . F 3 HOH A 37 337 59 HOH HOH . F 3 HOH A 38 338 40 HOH HOH . F 3 HOH A 39 339 88 HOH HOH . F 3 HOH A 40 340 95 HOH HOH . F 3 HOH A 41 341 121 HOH HOH . F 3 HOH A 42 342 10 HOH HOH . F 3 HOH A 43 343 53 HOH HOH . F 3 HOH A 44 344 167 HOH HOH . F 3 HOH A 45 345 132 HOH HOH . F 3 HOH A 46 346 37 HOH HOH . F 3 HOH A 47 347 36 HOH HOH . F 3 HOH A 48 348 70 HOH HOH . F 3 HOH A 49 349 28 HOH HOH . F 3 HOH A 50 350 145 HOH HOH . F 3 HOH A 51 351 117 HOH HOH . F 3 HOH A 52 352 103 HOH HOH . F 3 HOH A 53 353 45 HOH HOH . F 3 HOH A 54 354 169 HOH HOH . F 3 HOH A 55 355 217 HOH HOH . F 3 HOH A 56 356 81 HOH HOH . F 3 HOH A 57 357 3 HOH HOH . F 3 HOH A 58 358 171 HOH HOH . F 3 HOH A 59 359 122 HOH HOH . F 3 HOH A 60 360 161 HOH HOH . F 3 HOH A 61 361 126 HOH HOH . F 3 HOH A 62 362 245 HOH HOH . F 3 HOH A 63 363 128 HOH HOH . F 3 HOH A 64 364 57 HOH HOH . F 3 HOH A 65 365 11 HOH HOH . F 3 HOH A 66 366 39 HOH HOH . F 3 HOH A 67 367 205 HOH HOH . F 3 HOH A 68 368 52 HOH HOH . F 3 HOH A 69 369 232 HOH HOH . F 3 HOH A 70 370 227 HOH HOH . F 3 HOH A 71 371 99 HOH HOH . F 3 HOH A 72 372 76 HOH HOH . F 3 HOH A 73 373 190 HOH HOH . F 3 HOH A 74 374 54 HOH HOH . F 3 HOH A 75 375 43 HOH HOH . F 3 HOH A 76 376 18 HOH HOH . F 3 HOH A 77 377 118 HOH HOH . F 3 HOH A 78 378 85 HOH HOH . F 3 HOH A 79 379 214 HOH HOH . F 3 HOH A 80 380 138 HOH HOH . F 3 HOH A 81 381 22 HOH HOH . F 3 HOH A 82 382 32 HOH HOH . F 3 HOH A 83 383 100 HOH HOH . F 3 HOH A 84 384 192 HOH HOH . F 3 HOH A 85 385 151 HOH HOH . F 3 HOH A 86 386 129 HOH HOH . F 3 HOH A 87 387 21 HOH HOH . F 3 HOH A 88 388 29 HOH HOH . F 3 HOH A 89 389 17 HOH HOH . F 3 HOH A 90 390 105 HOH HOH . F 3 HOH A 91 391 206 HOH HOH . F 3 HOH A 92 392 9 HOH HOH . F 3 HOH A 93 393 72 HOH HOH . F 3 HOH A 94 394 139 HOH HOH . F 3 HOH A 95 395 47 HOH HOH . F 3 HOH A 96 396 55 HOH HOH . F 3 HOH A 97 397 140 HOH HOH . F 3 HOH A 98 398 235 HOH HOH . F 3 HOH A 99 399 49 HOH HOH . F 3 HOH A 100 400 211 HOH HOH . F 3 HOH A 101 401 63 HOH HOH . F 3 HOH A 102 402 233 HOH HOH . F 3 HOH A 103 403 82 HOH HOH . F 3 HOH A 104 404 218 HOH HOH . F 3 HOH A 105 405 220 HOH HOH . F 3 HOH A 106 406 78 HOH HOH . F 3 HOH A 107 407 84 HOH HOH . F 3 HOH A 108 408 225 HOH HOH . F 3 HOH A 109 409 4 HOH HOH . F 3 HOH A 110 410 27 HOH HOH . F 3 HOH A 111 411 207 HOH HOH . F 3 HOH A 112 412 170 HOH HOH . F 3 HOH A 113 413 31 HOH HOH . F 3 HOH A 114 414 116 HOH HOH . F 3 HOH A 115 415 143 HOH HOH . F 3 HOH A 116 416 15 HOH HOH . F 3 HOH A 117 417 115 HOH HOH . F 3 HOH A 118 418 61 HOH HOH . F 3 HOH A 119 419 142 HOH HOH . F 3 HOH A 120 420 2 HOH HOH . F 3 HOH A 121 421 66 HOH HOH . F 3 HOH A 122 422 246 HOH HOH . F 3 HOH A 123 423 35 HOH HOH . F 3 HOH A 124 424 155 HOH HOH . F 3 HOH A 125 425 92 HOH HOH . F 3 HOH A 126 426 106 HOH HOH . F 3 HOH A 127 427 24 HOH HOH . F 3 HOH A 128 428 41 HOH HOH . F 3 HOH A 129 429 111 HOH HOH . F 3 HOH A 130 430 12 HOH HOH . F 3 HOH A 131 431 80 HOH HOH . F 3 HOH A 132 432 1 HOH HOH . F 3 HOH A 133 433 90 HOH HOH . F 3 HOH A 134 434 120 HOH HOH . F 3 HOH A 135 435 83 HOH HOH . F 3 HOH A 136 436 248 HOH HOH . F 3 HOH A 137 437 87 HOH HOH . F 3 HOH A 138 438 210 HOH HOH . F 3 HOH A 139 439 51 HOH HOH . F 3 HOH A 140 440 119 HOH HOH . F 3 HOH A 141 441 234 HOH HOH . F 3 HOH A 142 442 98 HOH HOH . F 3 HOH A 143 443 71 HOH HOH . F 3 HOH A 144 444 114 HOH HOH . F 3 HOH A 145 445 196 HOH HOH . F 3 HOH A 146 446 110 HOH HOH . F 3 HOH A 147 447 97 HOH HOH . F 3 HOH A 148 448 58 HOH HOH . F 3 HOH A 149 449 236 HOH HOH . F 3 HOH A 150 450 231 HOH HOH . F 3 HOH A 151 451 165 HOH HOH . F 3 HOH A 152 452 209 HOH HOH . F 3 HOH A 153 453 157 HOH HOH . F 3 HOH A 154 454 216 HOH HOH . F 3 HOH A 155 455 200 HOH HOH . F 3 HOH A 156 456 68 HOH HOH . F 3 HOH A 157 457 162 HOH HOH . F 3 HOH A 158 458 228 HOH HOH . F 3 HOH A 159 459 244 HOH HOH . F 3 HOH A 160 460 226 HOH HOH . F 3 HOH A 161 461 131 HOH HOH . F 3 HOH A 162 462 74 HOH HOH . F 3 HOH A 163 463 107 HOH HOH . F 3 HOH A 164 464 137 HOH HOH . F 3 HOH A 165 465 213 HOH HOH . F 3 HOH A 166 466 238 HOH HOH . F 3 HOH A 167 467 152 HOH HOH . F 3 HOH A 168 468 197 HOH HOH . F 3 HOH A 169 469 221 HOH HOH . F 3 HOH A 170 470 237 HOH HOH . F 3 HOH A 171 471 109 HOH HOH . F 3 HOH A 172 472 64 HOH HOH . F 3 HOH A 173 473 135 HOH HOH . F 3 HOH A 174 474 203 HOH HOH . F 3 HOH A 175 475 187 HOH HOH . F 3 HOH A 176 476 249 HOH HOH . F 3 HOH A 177 477 102 HOH HOH . F 3 HOH A 178 478 184 HOH HOH . F 3 HOH A 179 479 79 HOH HOH . F 3 HOH A 180 480 229 HOH HOH . F 3 HOH A 181 481 204 HOH HOH . F 3 HOH A 182 482 240 HOH HOH . F 3 HOH A 183 483 222 HOH HOH . F 3 HOH A 184 484 202 HOH HOH . F 3 HOH A 185 485 156 HOH HOH . F 3 HOH A 186 486 224 HOH HOH . F 3 HOH A 187 487 239 HOH HOH . F 3 HOH A 188 488 243 HOH HOH . F 3 HOH A 189 489 164 HOH HOH . F 3 HOH A 190 490 147 HOH HOH . F 3 HOH A 191 491 158 HOH HOH . F 3 HOH A 192 492 38 HOH HOH . F 3 HOH A 193 493 219 HOH HOH . F 3 HOH A 194 494 148 HOH HOH . F 3 HOH A 195 495 215 HOH HOH . F 3 HOH A 196 496 176 HOH HOH . F 3 HOH A 197 497 94 HOH HOH . F 3 HOH A 198 498 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 31.638 37.105 68.01 1 115.01 ? S SO4 203 A 1 HETATM 2 O O1 SO4 . . . D 2 31.911 38.034 66.914 1 116.74 ? O1 SO4 203 A 1 HETATM 3 O O2 SO4 . . . D 2 30.593 36.171 67.591 1 106.96 ? O2 SO4 203 A 1 HETATM 4 O O3 SO4 . . . D 2 32.858 36.372 68.348 1 112.39 ? O3 SO4 203 A 1 HETATM 5 O O4 SO4 . . . D 2 31.192 37.853 69.185 1 113.63 ? O4 SO4 203 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #