data_6DKE # _model_server_result.job_id q56BKTRnhF31_JP0QZfpBw _model_server_result.datetime_utc '2024-11-14 05:06:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dke # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6DKE # _exptl.entry_id 6DKE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.94 _cell.angle_gamma 90 _cell.entry_id 6DKE _cell.length_a 46.825 _cell.length_b 62.337 _cell.length_c 50.43 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DKE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 247 n n C1 O2 PLM doub 248 n n C1 C2 PLM sing 249 n n O1 H PLM sing 250 n n C2 C3 PLM sing 251 n n C2 H21 PLM sing 252 n n C2 H22 PLM sing 253 n n C3 C4 PLM sing 254 n n C3 H31 PLM sing 255 n n C3 H32 PLM sing 256 n n C4 C5 PLM sing 257 n n C4 H41 PLM sing 258 n n C4 H42 PLM sing 259 n n C5 C6 PLM sing 260 n n C5 H51 PLM sing 261 n n C5 H52 PLM sing 262 n n C6 C7 PLM sing 263 n n C6 H61 PLM sing 264 n n C6 H62 PLM sing 265 n n C7 C8 PLM sing 266 n n C7 H71 PLM sing 267 n n C7 H72 PLM sing 268 n n C8 C9 PLM sing 269 n n C8 H81 PLM sing 270 n n C8 H82 PLM sing 271 n n C9 CA PLM sing 272 n n C9 H91 PLM sing 273 n n C9 H92 PLM sing 274 n n CA CB PLM sing 275 n n CA HA1 PLM sing 276 n n CA HA2 PLM sing 277 n n CB CC PLM sing 278 n n CB HB1 PLM sing 279 n n CB HB2 PLM sing 280 n n CC CD PLM sing 281 n n CC HC1 PLM sing 282 n n CC HC2 PLM sing 283 n n CD CE PLM sing 284 n n CD HD1 PLM sing 285 n n CD HD2 PLM sing 286 n n CE CF PLM sing 287 n n CE HE1 PLM sing 288 n n CE HE2 PLM sing 289 n n CF CG PLM sing 290 n n CF HF1 PLM sing 291 n n CF HF2 PLM sing 292 n n CG HG1 PLM sing 293 n n CG HG2 PLM sing 294 n n CG HG3 PLM sing 295 n n # _atom_sites.entry_id 6DKE _atom_sites.fract_transf_matrix[1][1] 0.021356 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00222 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019936 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 401 1 PLM PAL . C 3 HOH A 1 501 415 HOH HOH . C 3 HOH A 2 502 397 HOH HOH . C 3 HOH A 3 503 362 HOH HOH . C 3 HOH A 4 504 416 HOH HOH . C 3 HOH A 5 505 380 HOH HOH . C 3 HOH A 6 506 318 HOH HOH . C 3 HOH A 7 507 341 HOH HOH . C 3 HOH A 8 508 263 HOH HOH . C 3 HOH A 9 509 414 HOH HOH . C 3 HOH A 10 510 371 HOH HOH . C 3 HOH A 11 511 29 HOH HOH . C 3 HOH A 12 512 363 HOH HOH . C 3 HOH A 13 513 335 HOH HOH . C 3 HOH A 14 514 86 HOH HOH . C 3 HOH A 15 515 289 HOH HOH . C 3 HOH A 16 516 364 HOH HOH . C 3 HOH A 17 517 310 HOH HOH . C 3 HOH A 18 518 320 HOH HOH . C 3 HOH A 19 519 278 HOH HOH . C 3 HOH A 20 520 261 HOH HOH . C 3 HOH A 21 521 266 HOH HOH . C 3 HOH A 22 522 373 HOH HOH . C 3 HOH A 23 523 327 HOH HOH . C 3 HOH A 24 524 209 HOH HOH . C 3 HOH A 25 525 35 HOH HOH . C 3 HOH A 26 526 270 HOH HOH . C 3 HOH A 27 527 81 HOH HOH . C 3 HOH A 28 528 393 HOH HOH . C 3 HOH A 29 529 330 HOH HOH . C 3 HOH A 30 530 130 HOH HOH . C 3 HOH A 31 531 85 HOH HOH . C 3 HOH A 32 532 413 HOH HOH . C 3 HOH A 33 533 77 HOH HOH . C 3 HOH A 34 534 43 HOH HOH . C 3 HOH A 35 535 123 HOH HOH . C 3 HOH A 36 536 332 HOH HOH . C 3 HOH A 37 537 138 HOH HOH . C 3 HOH A 38 538 409 HOH HOH . C 3 HOH A 39 539 52 HOH HOH . C 3 HOH A 40 540 228 HOH HOH . C 3 HOH A 41 541 255 HOH HOH . C 3 HOH A 42 542 410 HOH HOH . C 3 HOH A 43 543 378 HOH HOH . C 3 HOH A 44 544 360 HOH HOH . C 3 HOH A 45 545 247 HOH HOH . C 3 HOH A 46 546 132 HOH HOH . C 3 HOH A 47 547 292 HOH HOH . C 3 HOH A 48 548 234 HOH HOH . C 3 HOH A 49 549 321 HOH HOH . C 3 HOH A 50 550 412 HOH HOH . C 3 HOH A 51 551 329 HOH HOH . C 3 HOH A 52 552 394 HOH HOH . C 3 HOH A 53 553 257 HOH HOH . C 3 HOH A 54 554 302 HOH HOH . C 3 HOH A 55 555 109 HOH HOH . C 3 HOH A 56 556 248 HOH HOH . C 3 HOH A 57 557 252 HOH HOH . C 3 HOH A 58 558 275 HOH HOH . C 3 HOH A 59 559 38 HOH HOH . C 3 HOH A 60 560 192 HOH HOH . C 3 HOH A 61 561 244 HOH HOH . C 3 HOH A 62 562 119 HOH HOH . C 3 HOH A 63 563 243 HOH HOH . C 3 HOH A 64 564 227 HOH HOH . C 3 HOH A 65 565 27 HOH HOH . C 3 HOH A 66 566 61 HOH HOH . C 3 HOH A 67 567 370 HOH HOH . C 3 HOH A 68 568 11 HOH HOH . C 3 HOH A 69 569 271 HOH HOH . C 3 HOH A 70 570 9 HOH HOH . C 3 HOH A 71 571 309 HOH HOH . C 3 HOH A 72 572 45 HOH HOH . C 3 HOH A 73 573 21 HOH HOH . C 3 HOH A 74 574 219 HOH HOH . C 3 HOH A 75 575 349 HOH HOH . C 3 HOH A 76 576 312 HOH HOH . C 3 HOH A 77 577 293 HOH HOH . C 3 HOH A 78 578 239 HOH HOH . C 3 HOH A 79 579 246 HOH HOH . C 3 HOH A 80 580 256 HOH HOH . C 3 HOH A 81 581 82 HOH HOH . C 3 HOH A 82 582 54 HOH HOH . C 3 HOH A 83 583 272 HOH HOH . C 3 HOH A 84 584 202 HOH HOH . C 3 HOH A 85 585 96 HOH HOH . C 3 HOH A 86 586 311 HOH HOH . C 3 HOH A 87 587 55 HOH HOH . C 3 HOH A 88 588 347 HOH HOH . C 3 HOH A 89 589 392 HOH HOH . C 3 HOH A 90 590 114 HOH HOH . C 3 HOH A 91 591 231 HOH HOH . C 3 HOH A 92 592 224 HOH HOH . C 3 HOH A 93 593 328 HOH HOH . C 3 HOH A 94 594 260 HOH HOH . C 3 HOH A 95 595 355 HOH HOH . C 3 HOH A 96 596 221 HOH HOH . C 3 HOH A 97 597 22 HOH HOH . C 3 HOH A 98 598 282 HOH HOH . C 3 HOH A 99 599 236 HOH HOH . C 3 HOH A 100 600 250 HOH HOH . C 3 HOH A 101 601 402 HOH HOH . C 3 HOH A 102 602 16 HOH HOH . C 3 HOH A 103 603 53 HOH HOH . C 3 HOH A 104 604 249 HOH HOH . C 3 HOH A 105 605 5 HOH HOH . C 3 HOH A 106 606 286 HOH HOH . C 3 HOH A 107 607 287 HOH HOH . C 3 HOH A 108 608 13 HOH HOH . C 3 HOH A 109 609 258 HOH HOH . C 3 HOH A 110 610 134 HOH HOH . C 3 HOH A 111 611 23 HOH HOH . C 3 HOH A 112 612 235 HOH HOH . C 3 HOH A 113 613 46 HOH HOH . C 3 HOH A 114 614 273 HOH HOH . C 3 HOH A 115 615 99 HOH HOH . C 3 HOH A 116 616 71 HOH HOH . C 3 HOH A 117 617 128 HOH HOH . C 3 HOH A 118 618 204 HOH HOH . C 3 HOH A 119 619 303 HOH HOH . C 3 HOH A 120 620 64 HOH HOH . C 3 HOH A 121 621 44 HOH HOH . C 3 HOH A 122 622 60 HOH HOH . C 3 HOH A 123 623 32 HOH HOH . C 3 HOH A 124 624 344 HOH HOH . C 3 HOH A 125 625 59 HOH HOH . C 3 HOH A 126 626 89 HOH HOH . C 3 HOH A 127 627 39 HOH HOH . C 3 HOH A 128 628 288 HOH HOH . C 3 HOH A 129 629 213 HOH HOH . C 3 HOH A 130 630 6 HOH HOH . C 3 HOH A 131 631 12 HOH HOH . C 3 HOH A 132 632 150 HOH HOH . C 3 HOH A 133 633 264 HOH HOH . C 3 HOH A 134 634 125 HOH HOH . C 3 HOH A 135 635 269 HOH HOH . C 3 HOH A 136 636 68 HOH HOH . C 3 HOH A 137 637 304 HOH HOH . C 3 HOH A 138 638 284 HOH HOH . C 3 HOH A 139 639 103 HOH HOH . C 3 HOH A 140 640 140 HOH HOH . C 3 HOH A 141 641 216 HOH HOH . C 3 HOH A 142 642 254 HOH HOH . C 3 HOH A 143 643 79 HOH HOH . C 3 HOH A 144 644 205 HOH HOH . C 3 HOH A 145 645 241 HOH HOH . C 3 HOH A 146 646 407 HOH HOH . C 3 HOH A 147 647 276 HOH HOH . C 3 HOH A 148 648 232 HOH HOH . C 3 HOH A 149 649 294 HOH HOH . C 3 HOH A 150 650 299 HOH HOH . C 3 HOH A 151 651 369 HOH HOH . C 3 HOH A 152 652 208 HOH HOH . C 3 HOH A 153 653 194 HOH HOH . C 3 HOH A 154 654 139 HOH HOH . C 3 HOH A 155 655 274 HOH HOH . C 3 HOH A 156 656 368 HOH HOH . C 3 HOH A 157 657 381 HOH HOH . C 3 HOH A 158 658 356 HOH HOH . C 3 HOH A 159 659 108 HOH HOH . C 3 HOH A 160 660 251 HOH HOH . C 3 HOH A 161 661 240 HOH HOH . C 3 HOH A 162 662 229 HOH HOH . C 3 HOH A 163 663 230 HOH HOH . C 3 HOH A 164 664 15 HOH HOH . C 3 HOH A 165 665 262 HOH HOH . C 3 HOH A 166 666 153 HOH HOH . C 3 HOH A 167 667 361 HOH HOH . C 3 HOH A 168 668 179 HOH HOH . C 3 HOH A 169 669 265 HOH HOH . C 3 HOH A 170 670 259 HOH HOH . C 3 HOH A 171 671 337 HOH HOH . C 3 HOH A 172 672 305 HOH HOH . C 3 HOH A 173 673 359 HOH HOH . C 3 HOH A 174 674 285 HOH HOH . C 3 HOH A 175 675 314 HOH HOH . C 3 HOH A 176 676 403 HOH HOH . C 3 HOH A 177 677 102 HOH HOH . C 3 HOH A 178 678 383 HOH HOH . C 3 HOH A 179 679 358 HOH HOH . C 3 HOH A 180 680 301 HOH HOH . C 3 HOH A 181 681 306 HOH HOH . C 3 HOH A 182 682 313 HOH HOH . C 3 HOH A 183 683 317 HOH HOH . C 3 HOH A 184 684 2 HOH HOH . C 3 HOH A 185 685 30 HOH HOH . C 3 HOH A 186 686 280 HOH HOH . C 3 HOH A 187 687 225 HOH HOH . C 3 HOH A 188 688 283 HOH HOH . C 3 HOH A 189 689 376 HOH HOH . C 3 HOH A 190 690 296 HOH HOH . C 3 HOH A 191 691 69 HOH HOH . C 3 HOH A 192 692 404 HOH HOH . C 3 HOH A 193 693 149 HOH HOH . C 3 HOH A 194 694 401 HOH HOH . C 3 HOH A 195 695 37 HOH HOH . C 3 HOH A 196 696 354 HOH HOH . C 3 HOH A 197 697 339 HOH HOH . C 3 HOH A 198 698 398 HOH HOH . C 3 HOH A 199 699 400 HOH HOH . C 3 HOH A 200 700 325 HOH HOH . C 3 HOH A 201 701 375 HOH HOH . C 3 HOH A 202 702 374 HOH HOH . C 3 HOH A 203 703 226 HOH HOH . C 3 HOH A 204 704 384 HOH HOH . C 3 HOH A 205 705 408 HOH HOH . C 3 HOH A 206 706 197 HOH HOH . C 3 HOH A 207 707 218 HOH HOH . C 3 HOH A 208 708 279 HOH HOH . C 3 HOH A 209 709 322 HOH HOH . C 3 HOH A 210 710 411 HOH HOH . C 3 HOH A 211 711 63 HOH HOH . C 3 HOH A 212 712 357 HOH HOH . C 3 HOH A 213 713 386 HOH HOH . C 3 HOH A 214 714 405 HOH HOH . C 3 HOH A 215 715 155 HOH HOH . C 3 HOH A 216 716 418 HOH HOH . C 3 HOH A 217 717 417 HOH HOH . C 3 HOH A 218 718 295 HOH HOH . C 3 HOH A 219 719 396 HOH HOH . C 3 HOH A 220 720 388 HOH HOH . C 3 HOH A 221 721 333 HOH HOH . C 3 HOH A 222 722 391 HOH HOH . C 3 HOH A 223 723 366 HOH HOH . C 3 HOH A 224 724 419 HOH HOH . C 3 HOH A 225 725 351 HOH HOH . C 3 HOH A 226 726 76 HOH HOH . C 3 HOH A 227 727 206 HOH HOH . C 3 HOH A 228 728 210 HOH HOH . C 3 HOH A 229 729 207 HOH HOH . C 3 HOH A 230 730 34 HOH HOH . C 3 HOH A 231 731 245 HOH HOH . C 3 HOH A 232 732 365 HOH HOH . C 3 HOH A 233 733 267 HOH HOH . C 3 HOH A 234 734 346 HOH HOH . C 3 HOH A 235 735 26 HOH HOH . C 3 HOH A 236 736 390 HOH HOH . C 3 HOH A 237 737 290 HOH HOH . C 3 HOH A 238 738 323 HOH HOH . C 3 HOH A 239 739 399 HOH HOH . C 3 HOH A 240 740 212 HOH HOH . C 3 HOH A 241 741 268 HOH HOH . C 3 HOH A 242 742 297 HOH HOH . C 3 HOH A 243 743 199 HOH HOH . C 3 HOH A 244 744 385 HOH HOH . C 3 HOH A 245 745 214 HOH HOH . C 3 HOH A 246 746 298 HOH HOH . C 3 HOH A 247 747 112 HOH HOH . C 3 HOH A 248 748 382 HOH HOH . C 3 HOH A 249 749 169 HOH HOH . C 3 HOH A 250 750 281 HOH HOH . C 3 HOH A 251 751 406 HOH HOH . C 3 HOH A 252 752 387 HOH HOH . C 3 HOH A 253 753 350 HOH HOH . C 3 HOH A 254 754 395 HOH HOH . C 3 HOH A 255 755 223 HOH HOH . C 3 HOH A 256 756 352 HOH HOH . C 3 HOH A 257 757 95 HOH HOH . C 3 HOH A 258 758 367 HOH HOH . C 3 HOH A 259 759 334 HOH HOH . C 3 HOH A 260 760 187 HOH HOH . C 3 HOH A 261 761 326 HOH HOH . C 3 HOH A 262 762 307 HOH HOH . C 3 HOH A 263 763 377 HOH HOH . C 3 HOH A 264 764 379 HOH HOH . C 3 HOH A 265 765 343 HOH HOH . C 3 HOH A 266 766 211 HOH HOH . C 3 HOH A 267 767 147 HOH HOH . C 3 HOH A 268 768 372 HOH HOH . C 3 HOH A 269 769 78 HOH HOH . C 3 HOH A 270 770 135 HOH HOH . C 3 HOH A 271 771 389 HOH HOH . C 3 HOH A 272 772 338 HOH HOH . C 3 HOH A 273 773 203 HOH HOH . C 3 HOH A 274 774 324 HOH HOH . C 3 HOH A 275 775 215 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . B 2 13.862 -11.746 7.998 1 23.39 ? C1 PLM 401 A 1 HETATM 2 O O1 PLM . . . B 2 13.079 -12.609 8.443 1 25.68 ? O1 PLM 401 A 1 HETATM 3 O O2 PLM . . . B 2 15.073 -11.668 8.227 1 25.72 ? O2 PLM 401 A 1 HETATM 4 C C2 PLM . . . B 2 13.255 -10.621 7.031 1 19.13 ? C2 PLM 401 A 1 HETATM 5 C C3 PLM . . . B 2 12.01 -9.92 7.608 1 18.85 ? C3 PLM 401 A 1 HETATM 6 C C4 PLM . . . B 2 12.184 -9.376 9.051 1 22.04 ? C4 PLM 401 A 1 HETATM 7 C C5 PLM . . . B 2 11.022 -8.498 9.559 1 18.66 ? C5 PLM 401 A 1 HETATM 8 C C6 PLM . . . B 2 11.247 -7.914 10.987 1 16.29 ? C6 PLM 401 A 1 HETATM 9 C C7 PLM . . . B 2 10.21 -6.862 11.421 1 17.72 ? C7 PLM 401 A 1 HETATM 10 C C8 PLM . . . B 2 10.414 -6.374 12.862 1 19.19 ? C8 PLM 401 A 1 HETATM 11 C C9 PLM . . . B 2 9.384 -5.348 13.333 1 20.15 ? C9 PLM 401 A 1 HETATM 12 C CA PLM . . . B 2 9.435 -4.016 12.557 1 17.94 ? CA PLM 401 A 1 HETATM 13 C CB PLM . . . B 2 8.546 -2.908 13.155 1 15.86 ? CB PLM 401 A 1 HETATM 14 C CC PLM . . . B 2 8.6 -1.579 12.373 1 20.07 ? CC PLM 401 A 1 HETATM 15 C CD PLM . . . B 2 7.829 -0.439 13.048 1 17.21 ? CD PLM 401 A 1 HETATM 16 C CE PLM . . . B 2 7.633 0.795 12.148 1 17.99 ? CE PLM 401 A 1 HETATM 17 C CF PLM . . . B 2 8.935 1.416 11.632 1 22.85 ? CF PLM 401 A 1 HETATM 18 C CG PLM . . . B 2 8.649 2.714 10.872 1 17.33 ? CG PLM 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #