data_6DM1 # _model_server_result.job_id gNXwRvve5QPjOtp2RvQQMA _model_server_result.datetime_utc '2024-12-23 07:51:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dm1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1302}' # _entry.id 6DM1 # _exptl.entry_id 6DM1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 389.878 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CYCLOTHIAZIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DM1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DM1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 54 A CYS 63 1_555 A SG CYS 306 A CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 709 A CYS 718 1_555 A SG CYS 764 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 A SG CYS 858 A CYS 1039 1_555 A SG CYS 886 A CYS 1067 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 885 A CYS 1066 1_555 A SG CYS 895 A CYS 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 B SG CYS 54 B CYS 63 1_555 B SG CYS 306 B CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 B SG CYS 709 B CYS 718 1_555 B SG CYS 764 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf7 B SG CYS 858 B CYS 1039 1_555 B SG CYS 886 B CYS 1067 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 B SG CYS 885 B CYS 1066 1_555 B SG CYS 895 B CYS 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf9 C SG CYS 54 C CYS 63 1_555 C SG CYS 306 C CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf10 C SG CYS 709 C CYS 718 1_555 C SG CYS 764 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf11 C SG CYS 858 C CYS 1039 1_555 C SG CYS 886 C CYS 1067 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf12 C SG CYS 885 C CYS 1066 1_555 C SG CYS 895 C CYS 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf13 D SG CYS 54 D CYS 63 1_555 D SG CYS 306 D CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf14 D SG CYS 709 D CYS 718 1_555 D SG CYS 764 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf15 D SG CYS 858 D CYS 1039 1_555 D SG CYS 886 D CYS 1067 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf16 D SG CYS 885 D CYS 1066 1_555 D SG CYS 895 D CYS 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'C14 H16 Cl N3 O4 S2' _chem_comp.formula_weight 389.878 _chem_comp.id CYZ _chem_comp.mon_nstd_flag . _chem_comp.name CYCLOTHIAZIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '3-BICYCLO[2.2.1]HEPT-5-EN-2-YL-6-CHLORO-3,4- DIHYDRO-2H-1,2,4-BENZOTHIADIAZINE-7-SULFONAMIDE 1,1 DIOXIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CYZ sing 83 n n C1 C6 CYZ sing 84 n n C1 C8 CYZ sing 85 n n C1 H11A CYZ sing 86 n n C2 C3 CYZ sing 87 n n C2 C7 CYZ sing 88 n n C2 H21 CYZ sing 89 n n C3 C4 CYZ doub 90 n n C3 H31A CYZ sing 91 n n C4 C5 CYZ sing 92 n n C4 H41 CYZ sing 93 n n C5 C6 CYZ sing 94 n n C5 C7 CYZ sing 95 n n C5 H51 CYZ sing 96 n n C6 H61 CYZ sing 97 n n C6 H62 CYZ sing 98 n n C7 H71 CYZ sing 99 n n C7 H72 CYZ sing 100 n n C8 N1 CYZ sing 101 n n C8 N2 CYZ sing 102 n n C8 H81 CYZ sing 103 n n N1 S1 CYZ sing 104 n n N1 HN1 CYZ sing 105 n n S1 C9 CYZ sing 106 n n S1 O1 CYZ doub 107 n n S1 O2 CYZ doub 108 n n C9 C10 CYZ doub 109 n y C9 C11 CYZ sing 110 n y C10 N2 CYZ sing 111 n n C10 C14 CYZ sing 112 n y N2 HN2 CYZ sing 113 n n C11 C12 CYZ doub 114 n y C11 H11 CYZ sing 115 n n C12 C13 CYZ sing 116 n y C12 S2 CYZ sing 117 n n C13 C14 CYZ doub 118 n y C13 CL CYZ sing 119 n n C14 H14 CYZ sing 120 n n S2 O3 CYZ doub 121 n n S2 O4 CYZ doub 122 n n S2 N3 CYZ sing 123 n n N3 H31 CYZ sing 124 n n N3 H32 CYZ sing 125 n n # _atom_sites.entry_id 6DM1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GLU A 1 1301 1301 GLU GLU . F 3 CYZ A 1 1302 1302 CYZ CYZ . G 2 GLU B 1 1301 1301 GLU GLU . H 3 CYZ B 1 1302 1302 CYZ CYZ . I 2 GLU C 1 1301 1301 GLU GLU . J 3 CYZ C 1 1302 1302 CYZ CYZ . K 4 GYY C 1 1303 1 GYY DRG . L 2 GLU D 1 1301 1301 GLU GLU . M 3 CYZ D 1 1302 1302 CYZ CYZ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CYZ . . . H 3 152.303 182.357 171.143 1 179.86 ? C1 CYZ 1302 B 1 HETATM 2 C C2 CYZ . . . H 3 152.099 183.464 171.067 1 179.86 ? C2 CYZ 1302 B 1 HETATM 3 C C3 CYZ . . . H 3 152.523 184.356 170.522 1 179.86 ? C3 CYZ 1302 B 1 HETATM 4 C C4 CYZ . . . H 3 154.087 184.113 170.671 1 179.86 ? C4 CYZ 1302 B 1 HETATM 5 C C5 CYZ . . . H 3 154.097 183.257 171.328 1 179.86 ? C5 CYZ 1302 B 1 HETATM 6 C C6 CYZ . . . H 3 153.685 182.217 171.219 1 179.86 ? C6 CYZ 1302 B 1 HETATM 7 C C7 CYZ . . . H 3 153.189 183.692 172.163 1 179.86 ? C7 CYZ 1302 B 1 HETATM 8 C C8 CYZ . . . H 3 151.748 181.606 169.698 1 179.86 ? C8 CYZ 1302 B 1 HETATM 9 N N1 CYZ . . . H 3 150.451 182.073 169.396 1 179.86 ? N1 CYZ 1302 B 1 HETATM 10 S S1 CYZ . . . H 3 150.056 181.483 167.972 1 179.86 ? S1 CYZ 1302 B 1 HETATM 11 C C9 CYZ . . . H 3 150.539 179.959 167.652 1 179.86 ? C9 CYZ 1302 B 1 HETATM 12 C C10 CYZ . . . H 3 151.338 179.332 168.52 1 179.86 ? C10 CYZ 1302 B 1 HETATM 13 N N2 CYZ . . . H 3 151.786 180.105 169.805 1 179.86 ? N2 CYZ 1302 B 1 HETATM 14 C C11 CYZ . . . H 3 150.098 179.326 166.472 1 179.86 ? C11 CYZ 1302 B 1 HETATM 15 C C12 CYZ . . . H 3 150.502 178.051 166.219 1 179.86 ? C12 CYZ 1302 B 1 HETATM 16 C C13 CYZ . . . H 3 151.336 177.392 167.109 1 179.86 ? C13 CYZ 1302 B 1 HETATM 17 C C14 CYZ . . . H 3 151.761 178.016 168.257 1 179.86 ? C14 CYZ 1302 B 1 HETATM 18 CL CL CYZ . . . H 3 151.86 175.706 166.757 1 179.86 ? CL CYZ 1302 B 1 HETATM 19 S S2 CYZ . . . H 3 149.927 177.226 164.682 1 179.86 ? S2 CYZ 1302 B 1 HETATM 20 O O1 CYZ . . . H 3 150.629 182.329 166.956 1 179.86 ? O1 CYZ 1302 B 1 HETATM 21 O O2 CYZ . . . H 3 148.576 181.458 167.893 1 179.86 ? O2 CYZ 1302 B 1 HETATM 22 O O3 CYZ . . . H 3 148.758 177.967 164.093 1 179.86 ? O3 CYZ 1302 B 1 HETATM 23 O O4 CYZ . . . H 3 149.298 175.927 164.977 1 179.86 ? O4 CYZ 1302 B 1 HETATM 24 N N3 CYZ . . . H 3 151.244 177.079 163.543 1 179.86 ? N3 CYZ 1302 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 24 #