data_6DN0 # _model_server_result.job_id wBlo-oTO72NqI0KNpsDB9g _model_server_result.datetime_utc '2024-10-19 02:16:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dn0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 6DN0 # _exptl.entry_id 6DN0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6DN0 _cell.length_a 91.981 _cell.length_b 91.981 _cell.length_c 114.677 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DN0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,I,J 1 1 C,D,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? disulf ? disulf2 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? disulf ? disulf3 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf4 D SG CYS 23 D CYS 23 1_555 D SG CYS 88 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 6DN0 _atom_sites.fract_transf_matrix[1][1] 0.010872 _atom_sites.fract_transf_matrix[1][2] 0.006277 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FMT A 1 201 201 FMT FMT . F 3 FMT A 1 202 204 FMT FMT . G 3 FMT B 1 201 202 FMT FMT . H 3 FMT C 1 201 203 FMT FMT . I 4 HOH A 1 301 37 HOH HOH . I 4 HOH A 2 302 40 HOH HOH . I 4 HOH A 3 303 21 HOH HOH . I 4 HOH A 4 304 56 HOH HOH . I 4 HOH A 5 305 68 HOH HOH . I 4 HOH A 6 306 9 HOH HOH . I 4 HOH A 7 307 72 HOH HOH . I 4 HOH A 8 308 24 HOH HOH . I 4 HOH A 9 309 36 HOH HOH . I 4 HOH A 10 310 78 HOH HOH . I 4 HOH A 11 311 17 HOH HOH . I 4 HOH A 12 312 32 HOH HOH . I 4 HOH A 13 313 41 HOH HOH . I 4 HOH A 14 314 71 HOH HOH . I 4 HOH A 15 315 50 HOH HOH . I 4 HOH A 16 316 15 HOH HOH . I 4 HOH A 17 317 57 HOH HOH . I 4 HOH A 18 318 4 HOH HOH . I 4 HOH A 19 319 67 HOH HOH . I 4 HOH A 20 320 39 HOH HOH . I 4 HOH A 21 321 64 HOH HOH . I 4 HOH A 22 322 73 HOH HOH . I 4 HOH A 23 323 74 HOH HOH . I 4 HOH A 24 324 55 HOH HOH . I 4 HOH A 25 325 58 HOH HOH . I 4 HOH A 26 326 43 HOH HOH . J 4 HOH B 1 301 29 HOH HOH . J 4 HOH B 2 302 69 HOH HOH . J 4 HOH B 3 303 33 HOH HOH . J 4 HOH B 4 304 28 HOH HOH . J 4 HOH B 5 305 26 HOH HOH . J 4 HOH B 6 306 5 HOH HOH . J 4 HOH B 7 307 8 HOH HOH . J 4 HOH B 8 308 6 HOH HOH . J 4 HOH B 9 309 3 HOH HOH . K 4 HOH C 1 301 34 HOH HOH . K 4 HOH C 2 302 63 HOH HOH . K 4 HOH C 3 303 35 HOH HOH . K 4 HOH C 4 304 25 HOH HOH . K 4 HOH C 5 305 13 HOH HOH . K 4 HOH C 6 306 2 HOH HOH . K 4 HOH C 7 307 12 HOH HOH . K 4 HOH C 8 308 75 HOH HOH . K 4 HOH C 9 309 30 HOH HOH . K 4 HOH C 10 310 62 HOH HOH . K 4 HOH C 11 311 76 HOH HOH . K 4 HOH C 12 312 47 HOH HOH . K 4 HOH C 13 313 52 HOH HOH . K 4 HOH C 14 314 48 HOH HOH . K 4 HOH C 15 315 49 HOH HOH . K 4 HOH C 16 316 51 HOH HOH . K 4 HOH C 17 317 59 HOH HOH . K 4 HOH C 18 318 14 HOH HOH . K 4 HOH C 19 319 20 HOH HOH . K 4 HOH C 20 320 45 HOH HOH . K 4 HOH C 21 321 70 HOH HOH . K 4 HOH C 22 322 77 HOH HOH . K 4 HOH C 23 323 80 HOH HOH . L 4 HOH D 1 201 60 HOH HOH . L 4 HOH D 2 202 16 HOH HOH . L 4 HOH D 3 203 10 HOH HOH . L 4 HOH D 4 204 66 HOH HOH . L 4 HOH D 5 205 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . F 3 13.797 -17.642 13.422 1 59.33 ? C FMT 202 A 1 HETATM 2 O O1 FMT . . . F 3 14.832 -18.121 13.862 1 56.97 ? O1 FMT 202 A 1 HETATM 3 O O2 FMT . . . F 3 13.001 -16.949 14.229 1 56.43 ? O2 FMT 202 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 3 #