data_6DND
#
_model_server_result.job_id            1u5yERYK2HFmE_ACl3GzjQ 
_model_server_result.datetime_utc      '2024-11-24 08:35:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6dnd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    6DND 
#
_exptl.entry_id    6DND 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              194.226 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TETRAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6DND 
_cell.length_a            91.036 
_cell.length_b            96.863 
_cell.length_c            97.871 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DND 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C8 H18 O5' 
_chem_comp.formula_weight    194.226 
_chem_comp.id                PG4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TETRAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 PG4 sing 237 n n 
O1 HO1 PG4 sing 238 n n 
C1 C2 PG4 sing 239 n n 
C1 H11 PG4 sing 240 n n 
C1 H12 PG4 sing 241 n n 
C2 O2 PG4 sing 242 n n 
C2 H21 PG4 sing 243 n n 
C2 H22 PG4 sing 244 n n 
O2 C3 PG4 sing 245 n n 
C3 C4 PG4 sing 246 n n 
C3 H31 PG4 sing 247 n n 
C3 H32 PG4 sing 248 n n 
C4 O3 PG4 sing 249 n n 
C4 H41 PG4 sing 250 n n 
C4 H42 PG4 sing 251 n n 
O3 C5 PG4 sing 252 n n 
C5 C6 PG4 sing 253 n n 
C5 H51 PG4 sing 254 n n 
C5 H52 PG4 sing 255 n n 
C6 O4 PG4 sing 256 n n 
C6 H61 PG4 sing 257 n n 
C6 H62 PG4 sing 258 n n 
O4 C7 PG4 sing 259 n n 
C7 C8 PG4 sing 260 n n 
C7 H71 PG4 sing 261 n n 
C7 H72 PG4 sing 262 n n 
C8 O5 PG4 sing 263 n n 
C8 H81 PG4 sing 264 n n 
C8 H82 PG4 sing 265 n n 
O5 HO5 PG4 sing 266 n n 
#
_atom_sites.entry_id                     6DND 
_atom_sites.fract_transf_matrix[1][1]    0.010985 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010324 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010218 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PG4 A 1 501 2 PG4 PG4 . 
D 3 PLP A 1 502 1 PLP PLP . 
E 2 PG4 B 1 501 1 PG4 PG4 . 
F 3 PLP B 1 502 2 PLP PLP . 
G 4 HOH A 1 601 28 HOH HOH . 
G 4 HOH A 2 602 41 HOH HOH . 
G 4 HOH A 3 603 65 HOH HOH . 
G 4 HOH A 4 604 97 HOH HOH . 
G 4 HOH A 5 605 53 HOH HOH . 
G 4 HOH A 6 606 17 HOH HOH . 
G 4 HOH A 7 607 45 HOH HOH . 
G 4 HOH A 8 608 27 HOH HOH . 
G 4 HOH A 9 609 32 HOH HOH . 
G 4 HOH A 10 610 98 HOH HOH . 
G 4 HOH A 11 611 71 HOH HOH . 
G 4 HOH A 12 612 12 HOH HOH . 
G 4 HOH A 13 613 14 HOH HOH . 
G 4 HOH A 14 614 11 HOH HOH . 
G 4 HOH A 15 615 94 HOH HOH . 
G 4 HOH A 16 616 88 HOH HOH . 
G 4 HOH A 17 617 36 HOH HOH . 
G 4 HOH A 18 618 95 HOH HOH . 
G 4 HOH A 19 619 38 HOH HOH . 
G 4 HOH A 20 620 1 HOH HOH . 
G 4 HOH A 21 621 16 HOH HOH . 
G 4 HOH A 22 622 31 HOH HOH . 
G 4 HOH A 23 623 76 HOH HOH . 
G 4 HOH A 24 624 99 HOH HOH . 
G 4 HOH A 25 625 89 HOH HOH . 
G 4 HOH A 26 626 64 HOH HOH . 
G 4 HOH A 27 627 75 HOH HOH . 
G 4 HOH A 28 628 50 HOH HOH . 
G 4 HOH A 29 629 101 HOH HOH . 
G 4 HOH A 30 630 6 HOH HOH . 
G 4 HOH A 31 631 18 HOH HOH . 
G 4 HOH A 32 632 29 HOH HOH . 
G 4 HOH A 33 633 96 HOH HOH . 
G 4 HOH A 34 634 100 HOH HOH . 
G 4 HOH A 35 635 77 HOH HOH . 
H 4 HOH B 1 601 44 HOH HOH . 
H 4 HOH B 2 602 61 HOH HOH . 
H 4 HOH B 3 603 86 HOH HOH . 
H 4 HOH B 4 604 91 HOH HOH . 
H 4 HOH B 5 605 19 HOH HOH . 
H 4 HOH B 6 606 84 HOH HOH . 
H 4 HOH B 7 607 9 HOH HOH . 
H 4 HOH B 8 608 85 HOH HOH . 
H 4 HOH B 9 609 63 HOH HOH . 
H 4 HOH B 10 610 57 HOH HOH . 
H 4 HOH B 11 611 37 HOH HOH . 
H 4 HOH B 12 612 82 HOH HOH . 
H 4 HOH B 13 613 20 HOH HOH . 
H 4 HOH B 14 614 49 HOH HOH . 
H 4 HOH B 15 615 42 HOH HOH . 
H 4 HOH B 16 616 25 HOH HOH . 
H 4 HOH B 17 617 23 HOH HOH . 
H 4 HOH B 18 618 74 HOH HOH . 
H 4 HOH B 19 619 7 HOH HOH . 
H 4 HOH B 20 620 59 HOH HOH . 
H 4 HOH B 21 621 22 HOH HOH . 
H 4 HOH B 22 622 68 HOH HOH . 
H 4 HOH B 23 623 5 HOH HOH . 
H 4 HOH B 24 624 35 HOH HOH . 
H 4 HOH B 25 625 62 HOH HOH . 
H 4 HOH B 26 626 43 HOH HOH . 
H 4 HOH B 27 627 72 HOH HOH . 
H 4 HOH B 28 628 93 HOH HOH . 
H 4 HOH B 29 629 4 HOH HOH . 
H 4 HOH B 30 630 34 HOH HOH . 
H 4 HOH B 31 631 79 HOH HOH . 
H 4 HOH B 32 632 73 HOH HOH . 
H 4 HOH B 33 633 69 HOH HOH . 
H 4 HOH B 34 634 15 HOH HOH . 
H 4 HOH B 35 635 54 HOH HOH . 
H 4 HOH B 36 636 8 HOH HOH . 
H 4 HOH B 37 637 48 HOH HOH . 
H 4 HOH B 38 638 90 HOH HOH . 
H 4 HOH B 39 639 2 HOH HOH . 
H 4 HOH B 40 640 58 HOH HOH . 
H 4 HOH B 41 641 60 HOH HOH . 
H 4 HOH B 42 642 47 HOH HOH . 
H 4 HOH B 43 643 26 HOH HOH . 
H 4 HOH B 44 644 55 HOH HOH . 
H 4 HOH B 45 645 51 HOH HOH . 
H 4 HOH B 46 646 46 HOH HOH . 
H 4 HOH B 47 647 70 HOH HOH . 
H 4 HOH B 48 648 67 HOH HOH . 
H 4 HOH B 49 649 3 HOH HOH . 
H 4 HOH B 50 650 33 HOH HOH . 
H 4 HOH B 51 651 56 HOH HOH . 
H 4 HOH B 52 652 78 HOH HOH . 
H 4 HOH B 53 653 21 HOH HOH . 
H 4 HOH B 54 654 13 HOH HOH . 
H 4 HOH B 55 655 83 HOH HOH . 
H 4 HOH B 56 656 30 HOH HOH . 
H 4 HOH B 57 657 52 HOH HOH . 
H 4 HOH B 58 658 40 HOH HOH . 
H 4 HOH B 59 659 39 HOH HOH . 
H 4 HOH B 60 660 66 HOH HOH . 
H 4 HOH B 61 661 24 HOH HOH . 
H 4 HOH B 62 662 10 HOH HOH . 
H 4 HOH B 63 663 81 HOH HOH . 
H 4 HOH B 64 664 87 HOH HOH . 
H 4 HOH B 65 665 92 HOH HOH . 
H 4 HOH B 66 666 80 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PG4 . . . E 2 108.769 135.226 173.363 1 68.82 ? O1 PG4 501 B 1 
HETATM 2 C C1 PG4 . . . E 2 108.29 135.051 174.725 1 74.6 ? C1 PG4 501 B 1 
HETATM 3 C C2 PG4 . . . E 2 108.989 133.788 175.283 1 83.6 ? C2 PG4 501 B 1 
HETATM 4 O O2 PG4 . . . E 2 108.192 132.946 176.135 1 70.29 ? O2 PG4 501 B 1 
HETATM 5 C C3 PG4 . . . E 2 107.073 132.472 175.398 1 54.28 ? C3 PG4 501 B 1 
HETATM 6 C C4 PG4 . . . E 2 106.965 130.96 175.576 1 59.75 ? C4 PG4 501 B 1 
HETATM 7 O O3 PG4 . . . E 2 105.689 130.49 175.118 1 51.21 ? O3 PG4 501 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           344 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           7 
#