data_6DNS
#
_model_server_result.job_id            pzz84ha5vCIXSaYXhy1UeA 
_model_server_result.datetime_utc      '2024-10-28 02:39:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6dns 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":705}' 
#
_entry.id    6DNS 
#
_exptl.entry_id    6DNS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6DNS 
_cell.length_a            61.914 
_cell.length_b            61.914 
_cell.length_c            324.395 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DNS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O THR 77 A THR 77 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc2 A OD1 ASP 79 A ASP 79 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.011 ? 
metalc ? metalc3 A OD2 ASP 79 A ASP 79 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? 
metalc ? metalc4 A O PHE 327 A PHE 327 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc5 A OD1 ASP 330 A ASP 330 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc6 A O ARG 332 A ARG 332 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? 
metalc ? metalc7 A OD1 ASN 335 A ASN 335 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? 
metalc ? metalc8 A OD1 ASP 336 A ASP 336 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc9 A O GLY 419 A GLY 419 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc10 A OD1 ASP 451 A ASP 451 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc11 A OE2 GLU 453 A GLU 453 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc12 A OD2 ASP 502 A ASP 502 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? 
metalc ? metalc13 A OD1 ASP 504 A ASP 504 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc14 A O GLY 528 A GLY 528 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc15 A OD2 ASP 560 A ASP 560 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? 
metalc ? metalc16 A OE1 GLU 562 A GLU 562 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? 
metalc ? metalc17 A OD2 ASP 564 A ASP 564 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
metalc ? metalc18 A OD2 ASP 609 A ASP 609 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? 
metalc ? metalc19 C CA CA . A CA 702 1_555 H O HOH . A HOH 838 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc20 E CA CA . A CA 704 1_555 H O HOH . A HOH 850 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6DNS 
_atom_sites.fract_transf_matrix[1][1]    0.016151 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016151 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003083 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 701 2 CA CA . 
C 2 CA A 1 702 5 CA CA . 
D 2 CA A 1 703 6 CA CA . 
E 2 CA A 1 704 7 CA CA . 
F 2 CA A 1 705 8 CA CA . 
G 3 EDO A 1 706 1 EDO EDO . 
H 4 HOH A 1 801 214 HOH HOH . 
H 4 HOH A 2 802 213 HOH HOH . 
H 4 HOH A 3 803 51 HOH HOH . 
H 4 HOH A 4 804 9 HOH HOH . 
H 4 HOH A 5 805 62 HOH HOH . 
H 4 HOH A 6 806 119 HOH HOH . 
H 4 HOH A 7 807 79 HOH HOH . 
H 4 HOH A 8 808 4 HOH HOH . 
H 4 HOH A 9 809 50 HOH HOH . 
H 4 HOH A 10 810 38 HOH HOH . 
H 4 HOH A 11 811 44 HOH HOH . 
H 4 HOH A 12 812 68 HOH HOH . 
H 4 HOH A 13 813 211 HOH HOH . 
H 4 HOH A 14 814 109 HOH HOH . 
H 4 HOH A 15 815 28 HOH HOH . 
H 4 HOH A 16 816 113 HOH HOH . 
H 4 HOH A 17 817 72 HOH HOH . 
H 4 HOH A 18 818 105 HOH HOH . 
H 4 HOH A 19 819 15 HOH HOH . 
H 4 HOH A 20 820 53 HOH HOH . 
H 4 HOH A 21 821 188 HOH HOH . 
H 4 HOH A 22 822 212 HOH HOH . 
H 4 HOH A 23 823 25 HOH HOH . 
H 4 HOH A 24 824 31 HOH HOH . 
H 4 HOH A 25 825 16 HOH HOH . 
H 4 HOH A 26 826 33 HOH HOH . 
H 4 HOH A 27 827 116 HOH HOH . 
H 4 HOH A 28 828 12 HOH HOH . 
H 4 HOH A 29 829 73 HOH HOH . 
H 4 HOH A 30 830 46 HOH HOH . 
H 4 HOH A 31 831 27 HOH HOH . 
H 4 HOH A 32 832 32 HOH HOH . 
H 4 HOH A 33 833 191 HOH HOH . 
H 4 HOH A 34 834 22 HOH HOH . 
H 4 HOH A 35 835 83 HOH HOH . 
H 4 HOH A 36 836 36 HOH HOH . 
H 4 HOH A 37 837 90 HOH HOH . 
H 4 HOH A 38 838 45 HOH HOH . 
H 4 HOH A 39 839 57 HOH HOH . 
H 4 HOH A 40 840 48 HOH HOH . 
H 4 HOH A 41 841 203 HOH HOH . 
H 4 HOH A 42 842 5 HOH HOH . 
H 4 HOH A 43 843 102 HOH HOH . 
H 4 HOH A 44 844 132 HOH HOH . 
H 4 HOH A 45 845 114 HOH HOH . 
H 4 HOH A 46 846 1 HOH HOH . 
H 4 HOH A 47 847 24 HOH HOH . 
H 4 HOH A 48 848 49 HOH HOH . 
H 4 HOH A 49 849 2 HOH HOH . 
H 4 HOH A 50 850 189 HOH HOH . 
H 4 HOH A 51 851 43 HOH HOH . 
H 4 HOH A 52 852 2 HOH HOH . 
H 4 HOH A 53 853 190 HOH HOH . 
H 4 HOH A 54 854 47 HOH HOH . 
H 4 HOH A 55 855 20 HOH HOH . 
H 4 HOH A 56 856 72 HOH HOH . 
H 4 HOH A 57 857 55 HOH HOH . 
H 4 HOH A 58 858 81 HOH HOH . 
H 4 HOH A 59 859 10 HOH HOH . 
H 4 HOH A 60 860 6 HOH HOH . 
H 4 HOH A 61 861 21 HOH HOH . 
H 4 HOH A 62 862 186 HOH HOH . 
H 4 HOH A 63 863 16 HOH HOH . 
H 4 HOH A 64 864 187 HOH HOH . 
H 4 HOH A 65 865 65 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -10.459 
_atom_site.Cartn_y               19.491 
_atom_site.Cartn_z               -9.232 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        40.93 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           705 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#