data_6DQA # _model_server_result.job_id 6XsjEdtS1-zQ4a-RPoykuw _model_server_result.datetime_utc '2024-10-19 19:30:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dqa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6DQA # _exptl.entry_id 6DQA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 411.517 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-{(R)-(3-aminophenyl)[2-(piperidin-1-yl)ethoxy]methyl}thieno[3,2-b]pyridine-7-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.47 _cell.angle_gamma 90 _cell.entry_id 6DQA _cell.length_a 116.726 _cell.length_b 61.687 _cell.length_c 46.633 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DQA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 225 A HIS 483 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc2 A OE2 GLU 227 A GLU 485 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc3 A NE2 HIS 313 A HIS 571 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc4 B N31 H6V . A H6V 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc5 C MN MN . A MN 602 1_555 I O HOH . A HOH 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc6 C MN MN . A MN 602 1_555 I O HOH . A HOH 772 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? # _chem_comp.formula 'C22 H25 N3 O3 S' _chem_comp.formula_weight 411.517 _chem_comp.id H6V _chem_comp.mon_nstd_flag . _chem_comp.name '2-{(R)-(3-aminophenyl)[2-(piperidin-1-yl)ethoxy]methyl}thieno[3,2-b]pyridine-7-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C26 H6V sing 151 n n C27 C28 H6V sing 152 n n C26 C25 H6V sing 153 n n C28 C29 H6V sing 154 n n C25 N24 H6V sing 155 n n C29 N24 H6V sing 156 n n N24 C23 H6V sing 157 n n C22 C23 H6V sing 158 n n C22 O21 H6V sing 159 n n C07 C06 H6V sing 160 n y C07 C08 H6V doub 161 n y N31 C06 H6V doub 162 n y N31 C32 H6V sing 163 n y C09 O21 H6V sing 164 n n C09 C08 H6V sing 165 n n C09 C10 H6V sing 166 n n C06 C05 H6V sing 167 n y C08 S30 H6V sing 168 n y C20 C10 H6V doub 169 n y C20 C14 H6V sing 170 n y C32 C33 H6V doub 171 n y N15 C14 H6V sing 172 n n C10 C11 H6V sing 173 n y C14 C13 H6V doub 174 n y C05 S30 H6V sing 175 n y C05 C04 H6V doub 176 n y C11 C12 H6V doub 177 n y C33 C04 H6V sing 178 n y C13 C12 H6V sing 179 n y C04 C02 H6V sing 180 n n C02 O03 H6V doub 181 n n C02 O01 H6V sing 182 n n C07 H1 H6V sing 183 n n C09 H2 H6V sing 184 n n C11 H3 H6V sing 185 n n C12 H4 H6V sing 186 n n C13 H5 H6V sing 187 n n C20 H6 H6V sing 188 n n C22 H7 H6V sing 189 n n C22 H8 H6V sing 190 n n C23 H9 H6V sing 191 n n C23 H10 H6V sing 192 n n C25 H11 H6V sing 193 n n C25 H12 H6V sing 194 n n C26 H13 H6V sing 195 n n C26 H14 H6V sing 196 n n C27 H15 H6V sing 197 n n C27 H16 H6V sing 198 n n C28 H17 H6V sing 199 n n C28 H18 H6V sing 200 n n C29 H19 H6V sing 201 n n C29 H20 H6V sing 202 n n C32 H21 H6V sing 203 n n C33 H22 H6V sing 204 n n N15 H23 H6V sing 205 n n N15 H24 H6V sing 206 n n O01 H26 H6V sing 207 n n # _atom_sites.entry_id 6DQA _atom_sites.fract_transf_matrix[1][1] 0.008567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000369 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016211 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021464 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H6V A 1 601 1 H6V N70 . C 3 MN A 1 602 1 MN MN . D 4 GOL A 1 603 503 GOL GOL . E 4 GOL A 1 604 505 GOL GOL . F 5 EDO A 1 605 601 EDO EDO . G 5 EDO A 1 606 602 EDO EDO . H 5 EDO A 1 607 603 EDO EDO . I 6 HOH A 1 701 227 HOH HOH . I 6 HOH A 2 702 229 HOH HOH . I 6 HOH A 3 703 230 HOH HOH . I 6 HOH A 4 704 196 HOH HOH . I 6 HOH A 5 705 46 HOH HOH . I 6 HOH A 6 706 111 HOH HOH . I 6 HOH A 7 707 220 HOH HOH . I 6 HOH A 8 708 43 HOH HOH . I 6 HOH A 9 709 4 HOH HOH . I 6 HOH A 10 710 47 HOH HOH . I 6 HOH A 11 711 69 HOH HOH . I 6 HOH A 12 712 31 HOH HOH . I 6 HOH A 13 713 85 HOH HOH . I 6 HOH A 14 714 75 HOH HOH . I 6 HOH A 15 715 179 HOH HOH . I 6 HOH A 16 716 76 HOH HOH . I 6 HOH A 17 717 2 HOH HOH . I 6 HOH A 18 718 30 HOH HOH . I 6 HOH A 19 719 11 HOH HOH . I 6 HOH A 20 720 48 HOH HOH . I 6 HOH A 21 721 7 HOH HOH . I 6 HOH A 22 722 91 HOH HOH . I 6 HOH A 23 723 21 HOH HOH . I 6 HOH A 24 724 185 HOH HOH . I 6 HOH A 25 725 13 HOH HOH . I 6 HOH A 26 726 96 HOH HOH . I 6 HOH A 27 727 123 HOH HOH . I 6 HOH A 28 728 72 HOH HOH . I 6 HOH A 29 729 15 HOH HOH . I 6 HOH A 30 730 155 HOH HOH . I 6 HOH A 31 731 186 HOH HOH . I 6 HOH A 32 732 218 HOH HOH . I 6 HOH A 33 733 28 HOH HOH . I 6 HOH A 34 734 45 HOH HOH . I 6 HOH A 35 735 42 HOH HOH . I 6 HOH A 36 736 106 HOH HOH . I 6 HOH A 37 737 81 HOH HOH . I 6 HOH A 38 738 36 HOH HOH . I 6 HOH A 39 739 204 HOH HOH . I 6 HOH A 40 740 117 HOH HOH . I 6 HOH A 41 741 16 HOH HOH . I 6 HOH A 42 742 9 HOH HOH . I 6 HOH A 43 743 37 HOH HOH . I 6 HOH A 44 744 209 HOH HOH . I 6 HOH A 45 745 206 HOH HOH . I 6 HOH A 46 746 65 HOH HOH . I 6 HOH A 47 747 5 HOH HOH . I 6 HOH A 48 748 20 HOH HOH . I 6 HOH A 49 749 49 HOH HOH . I 6 HOH A 50 750 14 HOH HOH . I 6 HOH A 51 751 34 HOH HOH . I 6 HOH A 52 752 27 HOH HOH . I 6 HOH A 53 753 171 HOH HOH . I 6 HOH A 54 754 26 HOH HOH . I 6 HOH A 55 755 1 HOH HOH . I 6 HOH A 56 756 12 HOH HOH . I 6 HOH A 57 757 67 HOH HOH . I 6 HOH A 58 758 50 HOH HOH . I 6 HOH A 59 759 35 HOH HOH . I 6 HOH A 60 760 24 HOH HOH . I 6 HOH A 61 761 107 HOH HOH . I 6 HOH A 62 762 6 HOH HOH . I 6 HOH A 63 763 38 HOH HOH . I 6 HOH A 64 764 40 HOH HOH . I 6 HOH A 65 765 214 HOH HOH . I 6 HOH A 66 766 215 HOH HOH . I 6 HOH A 67 767 60 HOH HOH . I 6 HOH A 68 768 54 HOH HOH . I 6 HOH A 69 769 59 HOH HOH . I 6 HOH A 70 770 97 HOH HOH . I 6 HOH A 71 771 53 HOH HOH . I 6 HOH A 72 772 32 HOH HOH . I 6 HOH A 73 773 23 HOH HOH . I 6 HOH A 74 774 89 HOH HOH . I 6 HOH A 75 775 61 HOH HOH . I 6 HOH A 76 776 98 HOH HOH . I 6 HOH A 77 777 113 HOH HOH . I 6 HOH A 78 778 29 HOH HOH . I 6 HOH A 79 779 25 HOH HOH . I 6 HOH A 80 780 3 HOH HOH . I 6 HOH A 81 781 70 HOH HOH . I 6 HOH A 82 782 39 HOH HOH . I 6 HOH A 83 783 71 HOH HOH . I 6 HOH A 84 784 222 HOH HOH . I 6 HOH A 85 785 110 HOH HOH . I 6 HOH A 86 786 83 HOH HOH . I 6 HOH A 87 787 109 HOH HOH . I 6 HOH A 88 788 93 HOH HOH . I 6 HOH A 89 789 19 HOH HOH . I 6 HOH A 90 790 56 HOH HOH . I 6 HOH A 91 791 205 HOH HOH . I 6 HOH A 92 792 115 HOH HOH . I 6 HOH A 93 793 57 HOH HOH . I 6 HOH A 94 794 212 HOH HOH . I 6 HOH A 95 795 62 HOH HOH . I 6 HOH A 96 796 44 HOH HOH . I 6 HOH A 97 797 194 HOH HOH . I 6 HOH A 98 798 64 HOH HOH . I 6 HOH A 99 799 228 HOH HOH . I 6 HOH A 100 800 198 HOH HOH . I 6 HOH A 101 801 73 HOH HOH . I 6 HOH A 102 802 17 HOH HOH . I 6 HOH A 103 803 145 HOH HOH . I 6 HOH A 104 804 226 HOH HOH . I 6 HOH A 105 805 51 HOH HOH . I 6 HOH A 106 806 68 HOH HOH . I 6 HOH A 107 807 202 HOH HOH . I 6 HOH A 108 808 10 HOH HOH . I 6 HOH A 109 809 41 HOH HOH . I 6 HOH A 110 810 101 HOH HOH . I 6 HOH A 111 811 103 HOH HOH . I 6 HOH A 112 812 203 HOH HOH . I 6 HOH A 113 813 164 HOH HOH . I 6 HOH A 114 814 95 HOH HOH . I 6 HOH A 115 815 77 HOH HOH . I 6 HOH A 116 816 219 HOH HOH . I 6 HOH A 117 817 108 HOH HOH . I 6 HOH A 118 818 191 HOH HOH . I 6 HOH A 119 819 58 HOH HOH . I 6 HOH A 120 820 92 HOH HOH . I 6 HOH A 121 821 141 HOH HOH . I 6 HOH A 122 822 22 HOH HOH . I 6 HOH A 123 823 199 HOH HOH . I 6 HOH A 124 824 208 HOH HOH . I 6 HOH A 125 825 55 HOH HOH . I 6 HOH A 126 826 52 HOH HOH . I 6 HOH A 127 827 231 HOH HOH . I 6 HOH A 128 828 119 HOH HOH . I 6 HOH A 129 829 74 HOH HOH . I 6 HOH A 130 830 99 HOH HOH . I 6 HOH A 131 831 90 HOH HOH . I 6 HOH A 132 832 112 HOH HOH . I 6 HOH A 133 833 124 HOH HOH . I 6 HOH A 134 834 190 HOH HOH . I 6 HOH A 135 835 224 HOH HOH . I 6 HOH A 136 836 216 HOH HOH . I 6 HOH A 137 837 225 HOH HOH . I 6 HOH A 138 838 213 HOH HOH . I 6 HOH A 139 839 79 HOH HOH . I 6 HOH A 140 840 197 HOH HOH . I 6 HOH A 141 841 84 HOH HOH . I 6 HOH A 142 842 100 HOH HOH . I 6 HOH A 143 843 210 HOH HOH . I 6 HOH A 144 844 223 HOH HOH . I 6 HOH A 145 845 188 HOH HOH . I 6 HOH A 146 846 207 HOH HOH . I 6 HOH A 147 847 189 HOH HOH . I 6 HOH A 148 848 211 HOH HOH . I 6 HOH A 149 849 201 HOH HOH . I 6 HOH A 150 850 78 HOH HOH . I 6 HOH A 151 851 157 HOH HOH . I 6 HOH A 152 852 102 HOH HOH . I 6 HOH A 153 853 88 HOH HOH . I 6 HOH A 154 854 162 HOH HOH . I 6 HOH A 155 855 118 HOH HOH . I 6 HOH A 156 856 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 H6V . . . B 2 -23.27 17.939 7.826 1 13.86 ? C02 H6V 601 A 1 HETATM 2 C C04 H6V . . . B 2 -23.418 17.606 6.34 1 12.12 ? C04 H6V 601 A 1 HETATM 3 C C05 H6V . . . B 2 -24.001 18.53 5.497 1 11.79 ? C05 H6V 601 A 1 HETATM 4 C C06 H6V . . . B 2 -24.129 18.231 4.139 1 14.54 ? C06 H6V 601 A 1 HETATM 5 C C07 H6V . . . B 2 -24.751 19.286 3.378 1 11.25 ? C07 H6V 601 A 1 HETATM 6 C C08 H6V . . . B 2 -25.068 20.372 4.181 1 13.55 ? C08 H6V 601 A 1 HETATM 7 C C09 H6V . . . B 2 -25.719 21.653 3.692 1 21.99 ? C09 H6V 601 A 1 HETATM 8 C C10 H6V . . . B 2 -26.923 21.902 4.569 1 14.26 ? C10 H6V 601 A 1 HETATM 9 C C11 H6V . . . B 2 -26.794 22.64 5.743 1 17.22 ? C11 H6V 601 A 1 HETATM 10 C C12 H6V . . . B 2 -27.906 22.859 6.526 1 16.01 ? C12 H6V 601 A 1 HETATM 11 C C13 H6V . . . B 2 -29.142 22.35 6.148 1 13.75 ? C13 H6V 601 A 1 HETATM 12 C C14 H6V . . . B 2 -29.258 21.627 4.968 1 11.52 ? C14 H6V 601 A 1 HETATM 13 C C20 H6V . . . B 2 -28.147 21.393 4.185 1 14.11 ? C20 H6V 601 A 1 HETATM 14 C C22 H6V . . . B 2 -24.817 23.685 2.996 1 59.94 ? C22 H6V 601 A 1 HETATM 15 C C23 H6V . . . B 2 -23.622 24.592 3.27 1 66.8 ? C23 H6V 601 A 1 HETATM 16 C C25 H6V . . . B 2 -23.428 25.074 0.941 1 70.14 ? C25 H6V 601 A 1 HETATM 17 C C26 H6V . . . B 2 -22.674 24.821 -0.362 1 72.75 ? C26 H6V 601 A 1 HETATM 18 C C27 H6V . . . B 2 -22.353 23.378 -0.541 1 74 ? C27 H6V 601 A 1 HETATM 19 C C28 H6V . . . B 2 -21.614 22.841 0.633 1 71.44 ? C28 H6V 601 A 1 HETATM 20 C C29 H6V . . . B 2 -22.378 23.081 1.931 1 72.24 ? C29 H6V 601 A 1 HETATM 21 C C32 H6V . . . B 2 -23.168 16.167 4.413 1 14.99 ? C32 H6V 601 A 1 HETATM 22 C C33 H6V . . . B 2 -22.994 16.403 5.781 1 13.82 ? C33 H6V 601 A 1 HETATM 23 N N15 H6V . . . B 2 -30.537 21.08 4.551 1 12.6 ? N15 H6V 601 A 1 HETATM 24 N N24 H6V . . . B 2 -22.727 24.515 2.132 1 70.53 ? N24 H6V 601 A 1 HETATM 25 N N31 H6V . . . B 2 -23.731 17.068 3.633 1 11.58 ? N31 H6V 601 A 1 HETATM 26 O O01 H6V . . . B 2 -22.516 17.264 8.569 1 12.14 ? O01 H6V 601 A 1 HETATM 27 O O03 H6V . . . B 2 -23.904 18.916 8.302 1 13.25 -1 O03 H6V 601 A 1 HETATM 28 O O21 H6V . . . B 2 -24.797 22.667 3.953 1 41.07 ? O21 H6V 601 A 1 HETATM 29 S S30 H6V . . . B 2 -24.641 20.078 5.809 1 12.89 ? S30 H6V 601 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #