data_6DQA # _model_server_result.job_id bhM1qITZE6iGOjsNSYIAvQ _model_server_result.datetime_utc '2024-11-25 00:16:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dqa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 6DQA # _exptl.entry_id 6DQA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.47 _cell.angle_gamma 90 _cell.entry_id 6DQA _cell.length_a 116.726 _cell.length_b 61.687 _cell.length_c 46.633 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DQA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 225 A HIS 483 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc2 A OE2 GLU 227 A GLU 485 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc3 A NE2 HIS 313 A HIS 571 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc4 B N31 H6V . A H6V 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc5 C MN MN . A MN 602 1_555 I O HOH . A HOH 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc6 C MN MN . A MN 602 1_555 I O HOH . A HOH 772 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6DQA _atom_sites.fract_transf_matrix[1][1] 0.008567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000369 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016211 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021464 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H6V A 1 601 1 H6V N70 . C 3 MN A 1 602 1 MN MN . D 4 GOL A 1 603 503 GOL GOL . E 4 GOL A 1 604 505 GOL GOL . F 5 EDO A 1 605 601 EDO EDO . G 5 EDO A 1 606 602 EDO EDO . H 5 EDO A 1 607 603 EDO EDO . I 6 HOH A 1 701 227 HOH HOH . I 6 HOH A 2 702 229 HOH HOH . I 6 HOH A 3 703 230 HOH HOH . I 6 HOH A 4 704 196 HOH HOH . I 6 HOH A 5 705 46 HOH HOH . I 6 HOH A 6 706 111 HOH HOH . I 6 HOH A 7 707 220 HOH HOH . I 6 HOH A 8 708 43 HOH HOH . I 6 HOH A 9 709 4 HOH HOH . I 6 HOH A 10 710 47 HOH HOH . I 6 HOH A 11 711 69 HOH HOH . I 6 HOH A 12 712 31 HOH HOH . I 6 HOH A 13 713 85 HOH HOH . I 6 HOH A 14 714 75 HOH HOH . I 6 HOH A 15 715 179 HOH HOH . I 6 HOH A 16 716 76 HOH HOH . I 6 HOH A 17 717 2 HOH HOH . I 6 HOH A 18 718 30 HOH HOH . I 6 HOH A 19 719 11 HOH HOH . I 6 HOH A 20 720 48 HOH HOH . I 6 HOH A 21 721 7 HOH HOH . I 6 HOH A 22 722 91 HOH HOH . I 6 HOH A 23 723 21 HOH HOH . I 6 HOH A 24 724 185 HOH HOH . I 6 HOH A 25 725 13 HOH HOH . I 6 HOH A 26 726 96 HOH HOH . I 6 HOH A 27 727 123 HOH HOH . I 6 HOH A 28 728 72 HOH HOH . I 6 HOH A 29 729 15 HOH HOH . I 6 HOH A 30 730 155 HOH HOH . I 6 HOH A 31 731 186 HOH HOH . I 6 HOH A 32 732 218 HOH HOH . I 6 HOH A 33 733 28 HOH HOH . I 6 HOH A 34 734 45 HOH HOH . I 6 HOH A 35 735 42 HOH HOH . I 6 HOH A 36 736 106 HOH HOH . I 6 HOH A 37 737 81 HOH HOH . I 6 HOH A 38 738 36 HOH HOH . I 6 HOH A 39 739 204 HOH HOH . I 6 HOH A 40 740 117 HOH HOH . I 6 HOH A 41 741 16 HOH HOH . I 6 HOH A 42 742 9 HOH HOH . I 6 HOH A 43 743 37 HOH HOH . I 6 HOH A 44 744 209 HOH HOH . I 6 HOH A 45 745 206 HOH HOH . I 6 HOH A 46 746 65 HOH HOH . I 6 HOH A 47 747 5 HOH HOH . I 6 HOH A 48 748 20 HOH HOH . I 6 HOH A 49 749 49 HOH HOH . I 6 HOH A 50 750 14 HOH HOH . I 6 HOH A 51 751 34 HOH HOH . I 6 HOH A 52 752 27 HOH HOH . I 6 HOH A 53 753 171 HOH HOH . I 6 HOH A 54 754 26 HOH HOH . I 6 HOH A 55 755 1 HOH HOH . I 6 HOH A 56 756 12 HOH HOH . I 6 HOH A 57 757 67 HOH HOH . I 6 HOH A 58 758 50 HOH HOH . I 6 HOH A 59 759 35 HOH HOH . I 6 HOH A 60 760 24 HOH HOH . I 6 HOH A 61 761 107 HOH HOH . I 6 HOH A 62 762 6 HOH HOH . I 6 HOH A 63 763 38 HOH HOH . I 6 HOH A 64 764 40 HOH HOH . I 6 HOH A 65 765 214 HOH HOH . I 6 HOH A 66 766 215 HOH HOH . I 6 HOH A 67 767 60 HOH HOH . I 6 HOH A 68 768 54 HOH HOH . I 6 HOH A 69 769 59 HOH HOH . I 6 HOH A 70 770 97 HOH HOH . I 6 HOH A 71 771 53 HOH HOH . I 6 HOH A 72 772 32 HOH HOH . I 6 HOH A 73 773 23 HOH HOH . I 6 HOH A 74 774 89 HOH HOH . I 6 HOH A 75 775 61 HOH HOH . I 6 HOH A 76 776 98 HOH HOH . I 6 HOH A 77 777 113 HOH HOH . I 6 HOH A 78 778 29 HOH HOH . I 6 HOH A 79 779 25 HOH HOH . I 6 HOH A 80 780 3 HOH HOH . I 6 HOH A 81 781 70 HOH HOH . I 6 HOH A 82 782 39 HOH HOH . I 6 HOH A 83 783 71 HOH HOH . I 6 HOH A 84 784 222 HOH HOH . I 6 HOH A 85 785 110 HOH HOH . I 6 HOH A 86 786 83 HOH HOH . I 6 HOH A 87 787 109 HOH HOH . I 6 HOH A 88 788 93 HOH HOH . I 6 HOH A 89 789 19 HOH HOH . I 6 HOH A 90 790 56 HOH HOH . I 6 HOH A 91 791 205 HOH HOH . I 6 HOH A 92 792 115 HOH HOH . I 6 HOH A 93 793 57 HOH HOH . I 6 HOH A 94 794 212 HOH HOH . I 6 HOH A 95 795 62 HOH HOH . I 6 HOH A 96 796 44 HOH HOH . I 6 HOH A 97 797 194 HOH HOH . I 6 HOH A 98 798 64 HOH HOH . I 6 HOH A 99 799 228 HOH HOH . I 6 HOH A 100 800 198 HOH HOH . I 6 HOH A 101 801 73 HOH HOH . I 6 HOH A 102 802 17 HOH HOH . I 6 HOH A 103 803 145 HOH HOH . I 6 HOH A 104 804 226 HOH HOH . I 6 HOH A 105 805 51 HOH HOH . I 6 HOH A 106 806 68 HOH HOH . I 6 HOH A 107 807 202 HOH HOH . I 6 HOH A 108 808 10 HOH HOH . I 6 HOH A 109 809 41 HOH HOH . I 6 HOH A 110 810 101 HOH HOH . I 6 HOH A 111 811 103 HOH HOH . I 6 HOH A 112 812 203 HOH HOH . I 6 HOH A 113 813 164 HOH HOH . I 6 HOH A 114 814 95 HOH HOH . I 6 HOH A 115 815 77 HOH HOH . I 6 HOH A 116 816 219 HOH HOH . I 6 HOH A 117 817 108 HOH HOH . I 6 HOH A 118 818 191 HOH HOH . I 6 HOH A 119 819 58 HOH HOH . I 6 HOH A 120 820 92 HOH HOH . I 6 HOH A 121 821 141 HOH HOH . I 6 HOH A 122 822 22 HOH HOH . I 6 HOH A 123 823 199 HOH HOH . I 6 HOH A 124 824 208 HOH HOH . I 6 HOH A 125 825 55 HOH HOH . I 6 HOH A 126 826 52 HOH HOH . I 6 HOH A 127 827 231 HOH HOH . I 6 HOH A 128 828 119 HOH HOH . I 6 HOH A 129 829 74 HOH HOH . I 6 HOH A 130 830 99 HOH HOH . I 6 HOH A 131 831 90 HOH HOH . I 6 HOH A 132 832 112 HOH HOH . I 6 HOH A 133 833 124 HOH HOH . I 6 HOH A 134 834 190 HOH HOH . I 6 HOH A 135 835 224 HOH HOH . I 6 HOH A 136 836 216 HOH HOH . I 6 HOH A 137 837 225 HOH HOH . I 6 HOH A 138 838 213 HOH HOH . I 6 HOH A 139 839 79 HOH HOH . I 6 HOH A 140 840 197 HOH HOH . I 6 HOH A 141 841 84 HOH HOH . I 6 HOH A 142 842 100 HOH HOH . I 6 HOH A 143 843 210 HOH HOH . I 6 HOH A 144 844 223 HOH HOH . I 6 HOH A 145 845 188 HOH HOH . I 6 HOH A 146 846 207 HOH HOH . I 6 HOH A 147 847 189 HOH HOH . I 6 HOH A 148 848 211 HOH HOH . I 6 HOH A 149 849 201 HOH HOH . I 6 HOH A 150 850 78 HOH HOH . I 6 HOH A 151 851 157 HOH HOH . I 6 HOH A 152 852 102 HOH HOH . I 6 HOH A 153 853 88 HOH HOH . I 6 HOH A 154 854 162 HOH HOH . I 6 HOH A 155 855 118 HOH HOH . I 6 HOH A 156 856 80 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -23.708 _atom_site.Cartn_y 16.376 _atom_site.Cartn_z 1.448 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #