data_6DRA # _model_server_result.job_id FsjR5ASguUO7g_td2hDc5w _model_server_result.datetime_utc '2024-10-19 03:41:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dra # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":3001}' # _entry.id 6DRA # _exptl.entry_id 6DRA _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DRA _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DRA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2455 A CYS 2455 1_555 A SG CYS 2461 A CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 2455 B CYS 2455 1_555 B SG CYS 2461 B CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 C SG CYS 2455 C CYS 2455 1_555 C SG CYS 2461 C CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 D SG CYS 2455 D CYS 2455 1_555 D SG CYS 2461 D CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A O ARG 743 A ARG 743 1_555 G CA CA . A CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc2 A O GLU 1122 A GLU 1122 1_555 G CA CA . A CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc3 A OE2 GLU 1125 A GLU 1125 1_555 G CA CA . A CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc4 A OE2 GLU 1882 A GLU 1882 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc5 A OE2 GLU 1946 A GLU 1946 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc6 A SG CYS 2538 A CYS 2538 1_555 E ZN ZN . A ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc7 A SG CYS 2541 A CYS 2541 1_555 E ZN ZN . A ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc8 A NE2 HIS 2558 A HIS 2558 1_555 E ZN ZN . A ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc9 A ND1 HIS 2563 A HIS 2563 1_555 E ZN ZN . A ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc10 A O THR 2581 A THR 2581 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc11 A OG1 THR 2581 A THR 2581 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc12 B O ARG 743 B ARG 743 1_555 J CA CA . B CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc13 B O GLU 1122 B GLU 1122 1_555 J CA CA . B CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc14 B OE2 GLU 1125 B GLU 1125 1_555 J CA CA . B CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc15 B OE2 GLU 1882 B GLU 1882 1_555 I CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc16 B OE2 GLU 1946 B GLU 1946 1_555 I CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc17 B SG CYS 2538 B CYS 2538 1_555 H ZN ZN . B ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc18 B SG CYS 2541 B CYS 2541 1_555 H ZN ZN . B ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc19 B NE2 HIS 2558 B HIS 2558 1_555 H ZN ZN . B ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc20 B ND1 HIS 2563 B HIS 2563 1_555 H ZN ZN . B ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc21 B O THR 2581 B THR 2581 1_555 I CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc22 B OG1 THR 2581 B THR 2581 1_555 I CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc23 C O ARG 743 C ARG 743 1_555 M CA CA . C CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc24 C O GLU 1122 C GLU 1122 1_555 M CA CA . C CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc25 C OE2 GLU 1125 C GLU 1125 1_555 M CA CA . C CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc26 C OE2 GLU 1882 C GLU 1882 1_555 L CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc27 C OE2 GLU 1946 C GLU 1946 1_555 L CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc28 C SG CYS 2538 C CYS 2538 1_555 K ZN ZN . C ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc29 C SG CYS 2541 C CYS 2541 1_555 K ZN ZN . C ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc30 C NE2 HIS 2558 C HIS 2558 1_555 K ZN ZN . C ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc31 C ND1 HIS 2563 C HIS 2563 1_555 K ZN ZN . C ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc32 C O THR 2581 C THR 2581 1_555 L CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc33 C OG1 THR 2581 C THR 2581 1_555 L CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc34 D O ARG 743 D ARG 743 1_555 P CA CA . D CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc35 D O GLU 1122 D GLU 1122 1_555 P CA CA . D CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc36 D OE2 GLU 1125 D GLU 1125 1_555 P CA CA . D CA 3003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc37 D OE2 GLU 1882 D GLU 1882 1_555 O CA CA . D CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc38 D OE2 GLU 1946 D GLU 1946 1_555 O CA CA . D CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc39 D SG CYS 2538 D CYS 2538 1_555 N ZN ZN . D ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc40 D SG CYS 2541 D CYS 2541 1_555 N ZN ZN . D ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc41 D NE2 HIS 2558 D HIS 2558 1_555 N ZN ZN . D ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc42 D ND1 HIS 2563 D HIS 2563 1_555 N ZN ZN . D ZN 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc43 D O THR 2581 D THR 2581 1_555 O CA CA . D CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc44 D OG1 THR 2581 D THR 2581 1_555 O CA CA . D CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6DRA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 3001 3001 ZN ZN . F 3 CA A 1 3002 3003 CA CA . G 3 CA A 1 3003 3004 CA CA . H 2 ZN B 1 3001 3001 ZN ZN . I 3 CA B 1 3002 3003 CA CA . J 3 CA B 1 3003 3004 CA CA . K 2 ZN C 1 3001 3001 ZN ZN . L 3 CA C 1 3002 3003 CA CA . M 3 CA C 1 3003 3004 CA CA . N 2 ZN D 1 3001 3001 ZN ZN . O 3 CA D 1 3002 3003 CA CA . P 3 CA D 1 3003 3004 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 2 _atom_site.Cartn_x 228.905 _atom_site.Cartn_y 211.124 _atom_site.Cartn_z 219.902 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 63.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 3001 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 166 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #