data_6DRD # _model_server_result.job_id M-hWB4YKGYd4K0g6ihnQ4w _model_server_result.datetime_utc '2024-12-30 16:45:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6drd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":101}' # _entry.id 6DRD # _exptl.entry_id 6DRD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 14 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DRD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DRD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tridecameric _pdbx_struct_assembly.oligomeric_count 13 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 14 N N N ? 14 O N N ? 14 P N N ? 14 Q N N ? 14 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 J SG CYS 7 J CYS 7 1_555 J SG CYS 44 J CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc1 C SG CYS 88 C CYS 88 1_555 N ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? metalc ? metalc2 C SG CYS 90 C CYS 90 1_555 N ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc3 C N CYS 94 C CYS 94 1_555 N ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc4 C SG CYS 94 C CYS 94 1_555 N ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc5 C SG CYS 97 C CYS 97 1_555 N ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc6 I SG CYS 17 I CYS 17 1_555 O ZN ZN . I ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc7 I SG CYS 20 I CYS 20 1_555 O ZN ZN . I ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? metalc ? metalc8 I SG CYS 39 I CYS 39 1_555 O ZN ZN . I ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc9 I SG CYS 42 I CYS 42 1_555 O ZN ZN . I ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc10 I SG CYS 86 I CYS 86 1_555 P ZN ZN . I ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc11 I SG CYS 114 I CYS 114 1_555 P ZN ZN . I ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc12 I SG CYS 119 I CYS 119 1_555 P ZN ZN . I ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc13 J SG CYS 7 J CYS 7 1_555 Q ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc14 J SG CYS 10 J CYS 10 1_555 Q ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc15 J SG CYS 44 J CYS 44 1_555 Q ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc16 J SG CYS 45 J CYS 45 1_555 Q ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc17 L SG CYS 19 L CYS 19 1_555 R ZN ZN . L ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc18 L N CYS 22 L CYS 22 1_555 R ZN ZN . L ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc19 L SG CYS 22 L CYS 22 1_555 R ZN ZN . L ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc20 L SG CYS 39 L CYS 39 1_555 R ZN ZN . L ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6DRD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code N 14 ZN C 1 301 1272 ZN ZN . O 14 ZN I 1 201 1126 ZN ZN . P 14 ZN I 1 202 1127 ZN ZN . Q 14 ZN J 1 101 1068 ZN ZN . R 14 ZN L 1 101 1059 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Q _atom_site.label_entity_id 14 _atom_site.Cartn_x 157.075 _atom_site.Cartn_y 131.035 _atom_site.Cartn_z 191.848 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 96.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id J _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 685 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #