data_6DRX # _model_server_result.job_id UDhaB1eNpfHlAYFTRd--0w _model_server_result.datetime_utc '2024-11-16 21:34:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6drx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 6DRX # _exptl.entry_id 6DRX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 338.447 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N-diethyl-N'-[(8alpha)-6-methyl-9,10-didehydroergolin-8-yl]urea" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DRX _cell.length_a 59.38 _cell.length_b 118.55 _cell.length_c 168.203 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DRX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 93 A CYS 128 1_555 A SG CYS 172 A CYS 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 356 A CYS 350 1_555 A SG CYS 359 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C20 H26 N4 O' _chem_comp.formula_weight 338.447 _chem_comp.id H8G _chem_comp.mon_nstd_flag . _chem_comp.name "N,N-diethyl-N'-[(8alpha)-6-methyl-9,10-didehydroergolin-8-yl]urea" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms lisuride # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC NAX H8G sing 206 n n CAI CAR H8G doub 207 n y CAI NAO H8G sing 208 n y CAL CAR H8G sing 209 n n CAL CAW H8G sing 210 n n CAR CAU H8G sing 211 n y NAO CAT H8G sing 212 n y NAX CAW H8G sing 213 n n NAX CAM H8G sing 214 n n CAW CAQ H8G sing 215 n n CAU CAT H8G sing 216 n y CAU CAS H8G doub 217 n y CAT CAH H8G doub 218 n y CAM CAV H8G sing 219 n n CAQ CAS H8G sing 220 n n CAQ CAE H8G doub 221 n n CAS CAG H8G sing 222 n y CAH CAF H8G sing 223 n y CAV CAE H8G sing 224 n n CAV NAN H8G sing 225 n n CAA CAJ H8G sing 226 n n NAN CAP H8G sing 227 n n CAG CAF H8G doub 228 n y CAJ NAY H8G sing 229 n n CAP NAY H8G sing 230 n n CAP OAD H8G doub 231 n n NAY CAK H8G sing 232 n n CAK CAB H8G sing 233 n n CAA H1 H8G sing 234 n n CAA H2 H8G sing 235 n n CAA H3 H8G sing 236 n n CAB H4 H8G sing 237 n n CAB H5 H8G sing 238 n n CAB H6 H8G sing 239 n n CAC H7 H8G sing 240 n n CAC H8 H8G sing 241 n n CAC H9 H8G sing 242 n n CAE H10 H8G sing 243 n n CAF H12 H8G sing 244 n n CAG H13 H8G sing 245 n n CAH H14 H8G sing 246 n n CAI H15 H8G sing 247 n n CAJ H16 H8G sing 248 n n CAJ H17 H8G sing 249 n n CAK H18 H8G sing 250 n n CAK H19 H8G sing 251 n n CAL H20 H8G sing 252 n n CAL H21 H8G sing 253 n n CAM H22 H8G sing 254 n n CAM H23 H8G sing 255 n n CAV H25 H8G sing 256 n n CAW H26 H8G sing 257 n n NAN H27 H8G sing 258 n n NAO H28 H8G sing 259 n n # _atom_sites.entry_id 6DRX _atom_sites.fract_transf_matrix[1][1] 0.016841 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008435 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H8G A 1 1201 1 H8G DRG . C 3 CLR A 1 1202 2003 CLR CLR . D 4 OLC A 1 1203 2004 OLC OLC . E 5 HOH A 1 1301 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA H8G . . . B 2 -16.347 -19.751 9.164 1 84.71 ? CAA H8G 1201 A 1 HETATM 2 C CAB H8G . . . B 2 -17.528 -18.822 13.521 1 85.96 ? CAB H8G 1201 A 1 HETATM 3 C CAC H8G . . . B 2 -20.745 -18.474 5.427 1 75.87 ? CAC H8G 1201 A 1 HETATM 4 C CAE H8G . . . B 2 -21.178 -17.135 9.192 1 76.96 ? CAE H8G 1201 A 1 HETATM 5 C CAF H8G . . . B 2 -23.722 -13.783 9.817 1 74.34 ? CAF H8G 1201 A 1 HETATM 6 C CAG H8G . . . B 2 -22.948 -14.929 9.67 1 74.41 ? CAG H8G 1201 A 1 HETATM 7 C CAH H8G . . . B 2 -23.996 -12.998 8.701 1 72.03 ? CAH H8G 1201 A 1 HETATM 8 C CAI H8G . . . B 2 -22.898 -13.663 5.49 1 71.04 ? CAI H8G 1201 A 1 HETATM 9 C CAJ H8G . . . B 2 -16.584 -18.734 10.242 1 84.11 ? CAJ H8G 1201 A 1 HETATM 10 C CAK H8G . . . B 2 -17.18 -19.792 12.394 1 85.13 ? CAK H8G 1201 A 1 HETATM 11 C CAL H8G . . . B 2 -21.593 -15.792 5.815 1 71.93 ? CAL H8G 1201 A 1 HETATM 12 C CAM H8G . . . B 2 -20.866 -18.952 7.701 1 77.15 ? CAM H8G 1201 A 1 HETATM 13 C CAP H8G . . . B 2 -18.983 -19.139 10.796 1 82.34 ? CAP H8G 1201 A 1 HETATM 14 C CAQ H8G . . . B 2 -21.697 -16.378 8.141 1 75.71 ? CAQ H8G 1201 A 1 HETATM 15 C CAR H8G . . . B 2 -22.374 -14.688 6.138 1 71.27 ? CAR H8G 1201 A 1 HETATM 16 C CAS H8G . . . B 2 -22.475 -15.258 8.405 1 73.95 ? CAS H8G 1201 A 1 HETATM 17 C CAT H8G . . . B 2 -23.523 -13.344 7.498 1 71.44 ? CAT H8G 1201 A 1 HETATM 18 C CAU H8G . . . B 2 -22.78 -14.46 7.392 1 72.39 ? CAU H8G 1201 A 1 HETATM 19 C CAV H8G . . . B 2 -20.742 -18.456 9.129 1 77.81 ? CAV H8G 1201 A 1 HETATM 20 C CAW H8G . . . B 2 -21.739 -16.91 6.854 1 74.58 ? CAW H8G 1201 A 1 HETATM 21 N NAN H8G . . . B 2 -19.354 -18.548 9.517 1 79.28 ? NAN H8G 1201 A 1 HETATM 22 N NAO H8G . . . B 2 -23.584 -12.851 6.264 1 71.33 ? NAO H8G 1201 A 1 HETATM 23 N NAX H8G . . . B 2 -20.673 -17.906 6.692 1 75.45 ? NAX H8G 1201 A 1 HETATM 24 N NAY H8G . . . B 2 -17.573 -19.225 11.155 1 84.06 ? NAY H8G 1201 A 1 HETATM 25 O OAD H8G . . . B 2 -19.856 -19.558 11.562 1 83.88 ? OAD H8G 1201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #