data_6DTP # _model_server_result.job_id tQs5uBv7cYZ-AJtIYFq0Zg _model_server_result.datetime_utc '2025-01-13 08:41:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dtp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":409}' # _entry.id 6DTP # _exptl.entry_id 6DTP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.07 _cell.angle_gamma 90 _cell.entry_id 6DTP _cell.length_a 120.761 _cell.length_b 42.188 _cell.length_c 122.671 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DTP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 371 n n C1 C2 PGE sing 372 n n C1 H1 PGE sing 373 n n C1 H12 PGE sing 374 n n O1 HO1 PGE sing 375 n n C2 O2 PGE sing 376 n n C2 H2 PGE sing 377 n n C2 H22 PGE sing 378 n n O2 C3 PGE sing 379 n n C3 C4 PGE sing 380 n n C3 H3 PGE sing 381 n n C3 H32 PGE sing 382 n n C4 O3 PGE sing 383 n n C4 H4 PGE sing 384 n n C4 H42 PGE sing 385 n n O4 C6 PGE sing 386 n n O4 HO4 PGE sing 387 n n C6 C5 PGE sing 388 n n C6 H6 PGE sing 389 n n C6 H62 PGE sing 390 n n C5 O3 PGE sing 391 n n C5 H5 PGE sing 392 n n C5 H52 PGE sing 393 n n # _atom_sites.entry_id 6DTP _atom_sites.fract_transf_matrix[1][1] 0.008281 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001771 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023704 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008336 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 401 1 GOL GOL . D 2 GOL A 1 402 3 GOL GOL . E 2 GOL A 1 403 4 GOL GOL . F 2 GOL A 1 404 5 GOL GOL . G 2 GOL A 1 405 6 GOL GOL . H 3 EDO A 1 406 1 EDO EDO . I 3 EDO A 1 407 6 EDO EDO . J 4 EM9 A 1 408 1 EM9 EM9 . K 5 PGE A 1 409 1 PGE PGE . L 2 GOL B 1 401 2 GOL GOL . M 2 GOL B 1 402 7 GOL GOL . N 3 EDO B 1 403 4 EDO EDO . O 3 EDO B 1 404 5 EDO EDO . P 6 PEG B 1 405 1 PEG PEG . Q 7 HOH A 1 501 14 HOH HOH . Q 7 HOH A 2 502 38 HOH HOH . Q 7 HOH A 3 503 26 HOH HOH . Q 7 HOH A 4 504 43 HOH HOH . Q 7 HOH A 5 505 11 HOH HOH . Q 7 HOH A 6 506 65 HOH HOH . Q 7 HOH A 7 507 41 HOH HOH . Q 7 HOH A 8 508 42 HOH HOH . Q 7 HOH A 9 509 48 HOH HOH . Q 7 HOH A 10 510 19 HOH HOH . Q 7 HOH A 11 511 15 HOH HOH . Q 7 HOH A 12 512 52 HOH HOH . Q 7 HOH A 13 513 25 HOH HOH . Q 7 HOH A 14 514 35 HOH HOH . Q 7 HOH A 15 515 3 HOH HOH . Q 7 HOH A 16 516 60 HOH HOH . Q 7 HOH A 17 517 61 HOH HOH . Q 7 HOH A 18 518 54 HOH HOH . Q 7 HOH A 19 519 23 HOH HOH . Q 7 HOH A 20 520 59 HOH HOH . Q 7 HOH A 21 521 22 HOH HOH . Q 7 HOH A 22 522 7 HOH HOH . Q 7 HOH A 23 523 31 HOH HOH . Q 7 HOH A 24 524 36 HOH HOH . Q 7 HOH A 25 525 49 HOH HOH . Q 7 HOH A 26 526 6 HOH HOH . Q 7 HOH A 27 527 53 HOH HOH . Q 7 HOH A 28 528 4 HOH HOH . Q 7 HOH A 29 529 39 HOH HOH . Q 7 HOH A 30 530 62 HOH HOH . Q 7 HOH A 31 531 45 HOH HOH . Q 7 HOH A 32 532 57 HOH HOH . Q 7 HOH A 33 533 8 HOH HOH . Q 7 HOH A 34 534 18 HOH HOH . R 7 HOH B 1 501 27 HOH HOH . R 7 HOH B 2 502 44 HOH HOH . R 7 HOH B 3 503 63 HOH HOH . R 7 HOH B 4 504 13 HOH HOH . R 7 HOH B 5 505 28 HOH HOH . R 7 HOH B 6 506 67 HOH HOH . R 7 HOH B 7 507 29 HOH HOH . R 7 HOH B 8 508 30 HOH HOH . R 7 HOH B 9 509 46 HOH HOH . R 7 HOH B 10 510 51 HOH HOH . R 7 HOH B 11 511 40 HOH HOH . R 7 HOH B 12 512 21 HOH HOH . R 7 HOH B 13 513 64 HOH HOH . R 7 HOH B 14 514 58 HOH HOH . R 7 HOH B 15 515 50 HOH HOH . R 7 HOH B 16 516 24 HOH HOH . R 7 HOH B 17 517 32 HOH HOH . R 7 HOH B 18 518 66 HOH HOH . R 7 HOH B 19 519 69 HOH HOH . R 7 HOH B 20 520 2 HOH HOH . R 7 HOH B 21 521 12 HOH HOH . R 7 HOH B 22 522 17 HOH HOH . R 7 HOH B 23 523 20 HOH HOH . R 7 HOH B 24 524 34 HOH HOH . R 7 HOH B 25 525 55 HOH HOH . R 7 HOH B 26 526 5 HOH HOH . R 7 HOH B 27 527 9 HOH HOH . R 7 HOH B 28 528 33 HOH HOH . R 7 HOH B 29 529 37 HOH HOH . R 7 HOH B 30 530 10 HOH HOH . R 7 HOH B 31 531 16 HOH HOH . R 7 HOH B 32 532 56 HOH HOH . R 7 HOH B 33 533 1 HOH HOH . R 7 HOH B 34 534 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . K 5 44.951 -12.571 10.238 1 81.6 ? C1 PGE 409 A 1 HETATM 2 O O1 PGE . . . K 5 45.644 -12.645 11.493 1 79.91 ? O1 PGE 409 A 1 HETATM 3 C C2 PGE . . . K 5 43.531 -12.075 10.47 1 81.8 ? C2 PGE 409 A 1 HETATM 4 O O2 PGE . . . K 5 43.526 -10.663 10.716 1 79.74 ? O2 PGE 409 A 1 HETATM 5 C C3 PGE . . . K 5 42.202 -10.128 10.67 1 78.32 ? C3 PGE 409 A 1 HETATM 6 C C4 PGE . . . K 5 41.984 -8.98 11.658 1 77.14 ? C4 PGE 409 A 1 HETATM 7 O O4 PGE . . . K 5 45.382 -6.495 9.719 1 68.2 ? O4 PGE 409 A 1 HETATM 8 C C6 PGE . . . K 5 44.471 -6.358 10.809 1 69.77 ? C6 PGE 409 A 1 HETATM 9 C C5 PGE . . . K 5 43.29 -7.303 10.623 1 72.93 ? C5 PGE 409 A 1 HETATM 10 O O3 PGE . . . K 5 43.118 -8.118 11.786 1 73.48 ? O3 PGE 409 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #