data_6DUQ
#
_model_server_result.job_id            KZFGZwDDyoLNeigy5V3GfQ 
_model_server_result.datetime_utc      '2024-11-12 21:23:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6duq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"FB","auth_seq_id":1001}' 
#
_entry.id    6DUQ 
#
_exptl.entry_id    6DUQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         89.94 
_cell.angle_beta          89.9 
_cell.angle_gamma         60.01 
_cell.entry_id            6DUQ 
_cell.length_a            126.35 
_cell.length_b            126.32 
_cell.length_c            166.82 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DUQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tridecameric 13 author_defined_assembly 1 
? tridecameric 13 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G,I,K,P,Q,R,V,W,X,Z,AA,BA,CA,GA,HA,IA,MA,NA,OA,SA,TA,UA,YA,ZA,AB,EB,FB,GB 1 1 
B,D,F,H,J,L,M,N,O,S,T,U,Y,DA,EA,FA,JA,KA,LA,PA,QA,RA,VA,WA,XA,BB,CB,DB,HB,IB,JB 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 BA N N 
? 5 EA N N 
? 5 HA N N 
? 5 KA N N 
? 5 NA N N 
? 5 QA N N 
? 5 TA N N 
? 5 WA N N 
? 5 ZA N N 
? 5 CB N N 
? 5 FB N N 
? 5 IB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 188 L THR 185 1_555 BA MG MG . L MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
metalc ? metalc2 AA O1B ADP . L ADP 1000 1_555 BA MG MG . L MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc3 AA O2B ADP . L ADP 1000 1_555 CA BE BEF . L BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.737 ? 
metalc ? metalc4 B OG1 THR 188 A THR 185 1_555 EA MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? 
metalc ? metalc5 DA O1B ADP . A ADP 1000 1_555 EA MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc6 DA O2B ADP . A ADP 1000 1_555 FA BE BEF . A BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.755 ? 
metalc ? metalc7 C OG1 THR 188 G THR 185 1_555 HA MG MG . G MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc8 GA O1B ADP . G ADP 1000 1_555 HA MG MG . G MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc9 GA O2B ADP . G ADP 1000 1_555 IA BE BEF . G BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? 
metalc ? metalc10 D OG1 THR 188 B THR 185 1_555 KA MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc11 JA O1B ADP . B ADP 1000 1_555 KA MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc12 JA O2B ADP . B ADP 1000 1_555 LA BE BEF . B BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.715 ? 
metalc ? metalc13 E OG1 THR 188 H THR 185 1_555 NA MG MG . H MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc14 MA O1B ADP . H ADP 1000 1_555 NA MG MG . H MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc15 MA O2B ADP . H ADP 1000 1_555 OA BE BEF . H BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.728 ? 
metalc ? metalc16 F OG1 THR 188 C THR 185 1_555 QA MG MG . C MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc17 PA O1B ADP . C ADP 1000 1_555 QA MG MG . C MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
metalc ? metalc18 PA O2B ADP . C ADP 1000 1_555 RA BE BEF . C BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.749 ? 
metalc ? metalc19 G OG1 THR 188 I THR 185 1_555 TA MG MG . I MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
metalc ? metalc20 SA O1B ADP . I ADP 1000 1_555 TA MG MG . I MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc21 SA O2B ADP . I ADP 1000 1_555 UA BE BEF . I BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 ? 
metalc ? metalc22 H OG1 THR 188 D THR 185 1_555 WA MG MG . D MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
metalc ? metalc23 VA O1B ADP . D ADP 1000 1_555 WA MG MG . D MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc24 VA O2B ADP . D ADP 1000 1_555 XA BE BEF . D BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.734 ? 
metalc ? metalc25 I OG1 THR 188 K THR 185 1_555 ZA MG MG . K MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? 
metalc ? metalc26 YA O1B ADP . K ADP 1000 1_555 ZA MG MG . K MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc27 YA O2B ADP . K ADP 1000 1_555 AB BE BEF . K BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.749 ? 
metalc ? metalc28 J OG1 THR 188 F THR 185 1_555 CB MG MG . F MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc29 BB O1B ADP . F ADP 1000 1_555 CB MG MG . F MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc30 BB O2B ADP . F ADP 1000 1_555 DB BE BEF . F BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.742 ? 
metalc ? metalc31 K OG1 THR 188 J THR 185 1_555 FB MG MG . J MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc32 EB O1B ADP . J ADP 1000 1_555 FB MG MG . J MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc33 EB O2B ADP . J ADP 1000 1_555 GB BE BEF . J BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.741 ? 
metalc ? metalc34 L OG1 THR 188 E THR 185 1_555 IB MG MG . E MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
metalc ? metalc35 HB O1B ADP . E ADP 1000 1_555 IB MG MG . E MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc36 HB O2B ADP . E ADP 1000 1_555 JB BE BEF . E BEF 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6DUQ 
_atom_sites.fract_transf_matrix[1][1]    0.007915 
_atom_sites.fract_transf_matrix[1][2]    -0.004567 
_atom_sites.fract_transf_matrix[1][3]    -0.000013 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00914 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005994 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
AA 4 ADP L 1 1000 1000 ADP ADP . 
BA 5 MG L 1 1001 1001 MG MG . 
CA 6 BEF L 1 1002 1002 BEF BEF . 
DA 4 ADP A 1 1000 1000 ADP ADP . 
EA 5 MG A 1 1001 1001 MG MG . 
FA 6 BEF A 1 1002 1002 BEF BEF . 
GA 4 ADP G 1 1000 1000 ADP ADP . 
HA 5 MG G 1 1001 1001 MG MG . 
IA 6 BEF G 1 1002 1002 BEF BEF . 
JA 4 ADP B 1 1000 1000 ADP ADP . 
KA 5 MG B 1 1001 1001 MG MG . 
LA 6 BEF B 1 1002 1002 BEF BEF . 
MA 4 ADP H 1 1000 1000 ADP ADP . 
NA 5 MG H 1 1001 1001 MG MG . 
OA 6 BEF H 1 1002 1002 BEF BEF . 
PA 4 ADP C 1 1000 1000 ADP ADP . 
QA 5 MG C 1 1001 1001 MG MG . 
RA 6 BEF C 1 1002 1002 BEF BEF . 
SA 4 ADP I 1 1000 1000 ADP ADP . 
TA 5 MG I 1 1001 1001 MG MG . 
UA 6 BEF I 1 1002 1002 BEF BEF . 
VA 4 ADP D 1 1000 1000 ADP ADP . 
WA 5 MG D 1 1001 1001 MG MG . 
XA 6 BEF D 1 1002 1002 BEF BEF . 
YA 4 ADP K 1 1000 1000 ADP ADP . 
ZA 5 MG K 1 1001 1001 MG MG . 
AB 6 BEF K 1 1002 1002 BEF BEF . 
BB 4 ADP F 1 1000 1000 ADP ADP . 
CB 5 MG F 1 1001 1001 MG MG . 
DB 6 BEF F 1 1002 1002 BEF BEF . 
EB 4 ADP J 1 1000 1000 ADP ADP . 
FB 5 MG J 1 1001 1001 MG MG . 
GB 6 BEF J 1 1002 1002 BEF BEF . 
HB 4 ADP E 1 1000 1000 ADP ADP . 
IB 5 MG E 1 1001 1001 MG MG . 
JB 6 BEF E 1 1002 1002 BEF BEF . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         FB 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -107.508 
_atom_site.Cartn_y               -50.133 
_atom_site.Cartn_z               150.738 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        142.76 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1001 
_atom_site.auth_asym_id          J 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              78 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#