data_6DW7
#
_model_server_result.job_id            doiB8VkzDDENE8xNf4LoXg 
_model_server_result.datetime_utc      '2024-11-13 05:42:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6dw7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":702}' 
#
_entry.id    6DW7 
#
_exptl.entry_id    6DW7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.67 
_cell.angle_gamma         90 
_cell.entry_id            6DW7 
_cell.length_a            84.546 
_cell.length_b            146.372 
_cell.length_c            98.929 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6DW7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 K N N 
? 3 O N N 
? 3 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O THR 38 A THR 114 1_555 J NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc2 A OD2 ASP 235 A ASP 311 1_555 I NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? 
metalc ? metalc3 E O1G DTP . A DTP 701 1_555 K MG MG . B MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc4 E O1B DTP . A DTP 701 1_555 K MG MG . B MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc5 F MG MG . A MG 702 1_555 G O1A GTP . A GTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc6 F MG MG . A MG 702 1_555 G O1B GTP . A GTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? 
metalc ? metalc7 F MG MG . A MG 702 1_555 G O1G GTP . A GTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? 
metalc ? metalc8 F MG MG . A MG 702 1_555 M O1B DTP . B DTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc9 F MG MG . A MG 702 1_555 M O3G DTP . B DTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc10 I NA NA . A NA 705 1_555 W O HOH . A HOH 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? 
metalc ? metalc11 J NA NA . A NA 706 1_555 W O HOH . A HOH 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
metalc ? metalc12 K MG MG . B MG 701 1_555 L O2B GTP . B GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc13 K MG MG . B MG 701 1_555 L O2A GTP . B GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc14 K MG MG . B MG 701 1_555 L O2G GTP . B GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.65 sing 
metalc ? metalc15 C O GLN 434 C GLN 510 1_555 S NA NA . C NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
metalc ? metalc16 C O LYS 436 C LYS 512 1_555 S NA NA . C NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? 
metalc ? metalc17 N O3G DTP . C DTP 701 1_555 O MG MG . C MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc18 N O2B DTP . C DTP 701 1_555 O MG MG . C MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc19 O MG MG . C MG 702 1_555 T O1G GTP . D GTP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
metalc ? metalc20 O MG MG . C MG 702 1_555 T O1B GTP . D GTP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? 
metalc ? metalc21 O MG MG . C MG 702 1_555 T O3A GTP . D GTP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc22 P MG MG . C MG 703 1_555 Q O2A GTP . C GTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc23 P MG MG . C MG 703 1_555 Q O2B GTP . C GTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
metalc ? metalc24 P MG MG . C MG 703 1_555 Q O2G GTP . C GTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.689 sing 
metalc ? metalc25 P MG MG . C MG 703 1_555 U O1G DTP . D DTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? 
metalc ? metalc26 P MG MG . C MG 703 1_555 U O2B DTP . D DTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6DW7 
_atom_sites.fract_transf_matrix[1][1]    0.011828 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005186 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006832 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011037 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 DTP A 1 701 800 DTP DTP . 
F 3 MG A 1 702 850 MG MG . 
G 4 GTP A 1 703 900 GTP GTP . 
H 5 GLY A 1 704 2 GLY GLY . 
I 6 NA A 1 705 2 NA NA . 
J 6 NA A 1 706 3 NA NA . 
K 3 MG B 1 701 850 MG MG . 
L 4 GTP B 1 702 900 GTP GTP . 
M 2 DTP B 1 703 800 DTP DTP . 
N 2 DTP C 1 701 800 DTP DTP . 
O 3 MG C 1 702 850 MG MG . 
P 3 MG C 1 703 850 MG MG . 
Q 4 GTP C 1 704 900 GTP GTP . 
R 5 GLY C 1 705 1 GLY GLY . 
S 6 NA C 1 706 1 NA NA . 
T 4 GTP D 1 701 900 GTP GTP . 
U 2 DTP D 1 702 800 DTP DTP . 
V 7 PO4 D 1 703 1 PO4 PO4 . 
W 8 HOH A 1 801 29 HOH HOH . 
W 8 HOH A 2 802 35 HOH HOH . 
W 8 HOH A 3 803 22 HOH HOH . 
W 8 HOH A 4 804 21 HOH HOH . 
W 8 HOH A 5 805 19 HOH HOH . 
W 8 HOH A 6 806 53 HOH HOH . 
W 8 HOH A 7 807 20 HOH HOH . 
W 8 HOH A 8 808 31 HOH HOH . 
W 8 HOH A 9 809 56 HOH HOH . 
W 8 HOH A 10 810 7 HOH HOH . 
W 8 HOH A 11 811 54 HOH HOH . 
W 8 HOH A 12 812 55 HOH HOH . 
W 8 HOH A 13 813 3 HOH HOH . 
W 8 HOH A 14 814 52 HOH HOH . 
X 8 HOH B 1 801 14 HOH HOH . 
X 8 HOH B 2 802 9 HOH HOH . 
X 8 HOH B 3 803 38 HOH HOH . 
X 8 HOH B 4 804 2 HOH HOH . 
X 8 HOH B 5 805 8 HOH HOH . 
X 8 HOH B 6 806 15 HOH HOH . 
X 8 HOH B 7 807 30 HOH HOH . 
X 8 HOH B 8 808 28 HOH HOH . 
X 8 HOH B 9 809 37 HOH HOH . 
X 8 HOH B 10 810 25 HOH HOH . 
X 8 HOH B 11 811 42 HOH HOH . 
X 8 HOH B 12 812 12 HOH HOH . 
X 8 HOH B 13 813 57 HOH HOH . 
X 8 HOH B 14 814 1 HOH HOH . 
X 8 HOH B 15 815 48 HOH HOH . 
X 8 HOH B 16 816 44 HOH HOH . 
X 8 HOH B 17 817 46 HOH HOH . 
X 8 HOH B 18 818 16 HOH HOH . 
Y 8 HOH C 1 801 4 HOH HOH . 
Y 8 HOH C 2 802 43 HOH HOH . 
Y 8 HOH C 3 803 18 HOH HOH . 
Y 8 HOH C 4 804 34 HOH HOH . 
Y 8 HOH C 5 805 32 HOH HOH . 
Y 8 HOH C 6 806 11 HOH HOH . 
Y 8 HOH C 7 807 13 HOH HOH . 
Y 8 HOH C 8 808 50 HOH HOH . 
Y 8 HOH C 9 809 17 HOH HOH . 
Y 8 HOH C 10 810 26 HOH HOH . 
Y 8 HOH C 11 811 24 HOH HOH . 
Y 8 HOH C 12 812 45 HOH HOH . 
Y 8 HOH C 13 813 49 HOH HOH . 
Z 8 HOH D 1 801 39 HOH HOH . 
Z 8 HOH D 2 802 40 HOH HOH . 
Z 8 HOH D 3 803 36 HOH HOH . 
Z 8 HOH D 4 804 51 HOH HOH . 
Z 8 HOH D 5 805 33 HOH HOH . 
Z 8 HOH D 6 806 27 HOH HOH . 
Z 8 HOH D 7 807 58 HOH HOH . 
Z 8 HOH D 8 808 60 HOH HOH . 
Z 8 HOH D 9 809 47 HOH HOH . 
Z 8 HOH D 10 810 41 HOH HOH . 
Z 8 HOH D 11 811 59 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         O 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               2.788 
_atom_site.Cartn_y               -19.373 
_atom_site.Cartn_z               3.103 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.95 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           702 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#