data_6DY0 # _model_server_result.job_id l_bZiRQloocsScKHpkrbAQ _model_server_result.datetime_utc '2024-11-15 00:34:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6dy0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":207}' # _entry.id 6DY0 # _exptl.entry_id 6DY0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 294.429 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{2-[4-(1,1,3,3-TETRAMETHYLBUTYL)PHENOXY]ETHOXY}ETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6DY0 _cell.length_a 157.871 _cell.length_b 157.871 _cell.length_c 157.871 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DY0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 19 A ASN 39 1_555 C C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 A ND2 ASN 89 A ASN 109 1_555 D C1 NAG . A NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 B SG CYS 1 B CYS 128 1_555 S C18 HJA . B HJA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? # _chem_comp.formula 'C18 H30 O3' _chem_comp.formula_weight 294.429 _chem_comp.id TON _chem_comp.mon_nstd_flag . _chem_comp.name 2-{2-[4-(1,1,3,3-TETRAMETHYLBUTYL)PHENOXY]ETHOXY}ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C14 TON doub 382 n y C13 C18 TON sing 383 n y C13 H13 TON sing 384 n n C14 C15 TON sing 385 n y C14 H14 TON sing 386 n n C15 O1 TON sing 387 n n C15 C16 TON doub 388 n y O1 C1 TON sing 389 n n C1 C2 TON sing 390 n n C1 H11 TON sing 391 n n C1 H12 TON sing 392 n n C2 O2 TON sing 393 n n C2 H21 TON sing 394 n n C2 H22 TON sing 395 n n O2 C3 TON sing 396 n n C3 C4 TON sing 397 n n C3 H31 TON sing 398 n n C3 H32 TON sing 399 n n C4 O3 TON sing 400 n n C4 H41 TON sing 401 n n C4 H42 TON sing 402 n n O3 HO3 TON sing 403 n n C16 C17 TON sing 404 n y C16 H162 TON sing 405 n n C17 C18 TON doub 406 n y C17 H17 TON sing 407 n n C18 C5 TON sing 408 n n C5 C8 TON sing 409 n n C5 C7 TON sing 410 n n C5 C6 TON sing 411 n n C8 H81 TON sing 412 n n C8 H82 TON sing 413 n n C8 H83 TON sing 414 n n C7 H71 TON sing 415 n n C7 H72 TON sing 416 n n C7 H73 TON sing 417 n n C6 C9 TON sing 418 n n C6 H61 TON sing 419 n n C6 H62 TON sing 420 n n C9 C12 TON sing 421 n n C9 C11 TON sing 422 n n C9 C10 TON sing 423 n n C12 H121 TON sing 424 n n C12 H122 TON sing 425 n n C12 H123 TON sing 426 n n C11 H111 TON sing 427 n n C11 H112 TON sing 428 n n C11 H113 TON sing 429 n n C10 H101 TON sing 430 n n C10 H102 TON sing 431 n n C10 H103 TON sing 432 n n # _atom_sites.entry_id 6DY0 _atom_sites.fract_transf_matrix[1][1] 0.006334 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 201 1 NAG NAG . D 3 NAG A 1 202 2 NAG NAG . E 4 CL A 1 203 7 CL CL . F 4 CL A 1 204 10 CL CL . G 4 CL A 1 205 11 CL CL . H 4 CL A 1 206 12 CL CL . I 5 TON A 1 207 1 TON TON . J 5 TON A 1 208 2 TON TON . K 4 CL B 1 401 1 CL CL . L 4 CL B 1 402 2 CL CL . M 4 CL B 1 403 3 CL CL . N 4 CL B 1 404 4 CL CL . O 4 CL B 1 405 5 CL CL . P 4 CL B 1 406 6 CL CL . Q 4 CL B 1 407 8 CL CL . R 4 CL B 1 408 9 CL CL . S 6 HJA B 1 409 1 HJA WTF . T 7 HOH A 1 301 26 HOH HOH . T 7 HOH A 2 302 1 HOH HOH . T 7 HOH A 3 303 19 HOH HOH . T 7 HOH A 4 304 31 HOH HOH . T 7 HOH A 5 305 30 HOH HOH . U 7 HOH B 1 501 25 HOH HOH . U 7 HOH B 2 502 3 HOH HOH . U 7 HOH B 3 503 2 HOH HOH . U 7 HOH B 4 504 27 HOH HOH . U 7 HOH B 5 505 23 HOH HOH . U 7 HOH B 6 506 13 HOH HOH . U 7 HOH B 7 507 8 HOH HOH . U 7 HOH B 8 508 12 HOH HOH . U 7 HOH B 9 509 4 HOH HOH . U 7 HOH B 10 510 18 HOH HOH . U 7 HOH B 11 511 6 HOH HOH . U 7 HOH B 12 512 10 HOH HOH . U 7 HOH B 13 513 7 HOH HOH . U 7 HOH B 14 514 14 HOH HOH . U 7 HOH B 15 515 28 HOH HOH . U 7 HOH B 16 516 16 HOH HOH . U 7 HOH B 17 517 9 HOH HOH . U 7 HOH B 18 518 17 HOH HOH . U 7 HOH B 19 519 15 HOH HOH . U 7 HOH B 20 520 21 HOH HOH . U 7 HOH B 21 521 5 HOH HOH . U 7 HOH B 22 522 11 HOH HOH . U 7 HOH B 23 523 22 HOH HOH . U 7 HOH B 24 524 32 HOH HOH . U 7 HOH B 25 525 20 HOH HOH . U 7 HOH B 26 526 24 HOH HOH . U 7 HOH B 27 527 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 TON . . . I 5 -17.385 2.224 -4.14 1 84.96 ? C13 TON 207 A 1 HETATM 2 C C14 TON . . . I 5 -16.046 2.533 -3.882 1 85.13 ? C14 TON 207 A 1 HETATM 3 C C15 TON . . . I 5 -15.031 1.792 -4.48 1 88.19 ? C15 TON 207 A 1 HETATM 4 O O1 TON . . . I 5 -13.66 2.107 -4.215 1 72.68 ? O1 TON 207 A 1 HETATM 5 C C1 TON . . . I 5 -12.806 2.017 -5.358 1 96.77 ? C1 TON 207 A 1 HETATM 6 C C2 TON . . . I 5 -11.586 2.949 -5.191 1 106.87 ? C2 TON 207 A 1 HETATM 7 O O2 TON . . . I 5 -10.647 2.675 -6.229 1 115.16 ? O2 TON 207 A 1 HETATM 8 C C3 TON . . . I 5 -9.289 2.894 -5.878 1 106.07 ? C3 TON 207 A 1 HETATM 9 C C4 TON . . . I 5 -8.377 2.351 -6.998 1 89.32 ? C4 TON 207 A 1 HETATM 10 O O3 TON . . . I 5 -7.111 2.037 -6.458 1 105.19 ? O3 TON 207 A 1 HETATM 11 C C16 TON . . . I 5 -15.36 0.74 -5.328 1 93.2 ? C16 TON 207 A 1 HETATM 12 C C17 TON . . . I 5 -16.699 0.432 -5.582 1 78.89 ? C17 TON 207 A 1 HETATM 13 C C18 TON . . . I 5 -17.719 1.178 -4.993 1 65.24 ? C18 TON 207 A 1 HETATM 14 C C5 TON . . . I 5 -19.227 0.837 -5.267 1 56.38 ? C5 TON 207 A 1 HETATM 15 C C8 TON . . . I 5 -19.944 0.909 -3.917 1 55.02 ? C8 TON 207 A 1 HETATM 16 C C7 TON . . . I 5 -19.36 -0.625 -5.717 1 73.48 ? C7 TON 207 A 1 HETATM 17 C C6 TON . . . I 5 -19.993 1.874 -6.193 1 67.29 ? C6 TON 207 A 1 HETATM 18 C C9 TON . . . I 5 -19.562 2.111 -7.696 1 72.85 ? C9 TON 207 A 1 HETATM 19 C C12 TON . . . I 5 -18.174 2.721 -7.848 1 76.54 ? C12 TON 207 A 1 HETATM 20 C C11 TON . . . I 5 -20.559 3.141 -8.255 1 64.65 ? C11 TON 207 A 1 HETATM 21 C C10 TON . . . I 5 -19.692 0.883 -8.615 1 76.88 ? C10 TON 207 A 1 HETATM 22 H H13 TON . . . I 5 -18.058 2.725 -3.74 1 101.95 ? H13 TON 207 A 1 HETATM 23 H H14 TON . . . I 5 -15.833 3.238 -3.314 1 102.16 ? H14 TON 207 A 1 HETATM 24 H H11 TON . . . I 5 -12.5 1.103 -5.458 1 116.13 ? H11 TON 207 A 1 HETATM 25 H H12 TON . . . I 5 -13.303 2.277 -6.149 1 116.13 ? H12 TON 207 A 1 HETATM 26 H H21 TON . . . I 5 -11.873 3.874 -5.249 1 128.25 ? H21 TON 207 A 1 HETATM 27 H H22 TON . . . I 5 -11.172 2.791 -4.329 1 128.25 ? H22 TON 207 A 1 HETATM 28 H H31 TON . . . I 5 -9.133 3.844 -5.767 1 127.29 ? H31 TON 207 A 1 HETATM 29 H H32 TON . . . I 5 -9.091 2.434 -5.048 1 127.29 ? H32 TON 207 A 1 HETATM 30 H H41 TON . . . I 5 -8.774 1.551 -7.379 1 107.19 ? H41 TON 207 A 1 HETATM 31 H H42 TON . . . I 5 -8.277 3.024 -7.689 1 107.19 ? H42 TON 207 A 1 HETATM 32 H HO3 TON . . . I 5 -7.2 1.454 -5.845 1 126.23 ? HO3 TON 207 A 1 HETATM 33 H H162 TON . . . I 5 -14.686 0.24 -5.728 1 111.84 ? H162 TON 207 A 1 HETATM 34 H H17 TON . . . I 5 -16.911 -0.271 -6.152 1 94.67 ? H17 TON 207 A 1 HETATM 35 H H81 TON . . . I 5 -20.332 1.791 -3.803 1 66.02 ? H81 TON 207 A 1 HETATM 36 H H82 TON . . . I 5 -19.309 0.741 -3.204 1 66.02 ? H82 TON 207 A 1 HETATM 37 H H83 TON . . . I 5 -20.647 0.241 -3.889 1 66.02 ? H83 TON 207 A 1 HETATM 38 H H71 TON . . . I 5 -18.984 -0.725 -6.605 1 88.18 ? H71 TON 207 A 1 HETATM 39 H H72 TON . . . I 5 -20.298 -0.874 -5.733 1 88.18 ? H72 TON 207 A 1 HETATM 40 H H73 TON . . . I 5 -18.884 -1.199 -5.097 1 88.18 ? H73 TON 207 A 1 HETATM 41 H H61 TON . . . I 5 -19.949 2.734 -5.748 1 80.75 ? H61 TON 207 A 1 HETATM 42 H H62 TON . . . I 5 -20.925 1.603 -6.208 1 80.75 ? H62 TON 207 A 1 HETATM 43 H H121 TON . . . I 5 -17.895 2.664 -8.775 1 91.84 ? H121 TON 207 A 1 HETATM 44 H H122 TON . . . I 5 -17.545 2.236 -7.291 1 91.84 ? H122 TON 207 A 1 HETATM 45 H H123 TON . . . I 5 -18.197 3.651 -7.573 1 91.84 ? H123 TON 207 A 1 HETATM 46 H H111 TON . . . I 5 -20.138 4.014 -8.289 1 77.58 ? H111 TON 207 A 1 HETATM 47 H H112 TON . . . I 5 -21.339 3.181 -7.68 1 77.58 ? H112 TON 207 A 1 HETATM 48 H H113 TON . . . I 5 -20.829 2.878 -9.148 1 77.58 ? H113 TON 207 A 1 HETATM 49 H H101 TON . . . I 5 -19.171 0.15 -8.251 1 92.26 ? H101 TON 207 A 1 HETATM 50 H H102 TON . . . I 5 -19.364 1.105 -9.5 1 92.26 ? H102 TON 207 A 1 HETATM 51 H H103 TON . . . I 5 -20.624 0.62 -8.672 1 92.26 ? H103 TON 207 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 457 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 51 #